Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016- 01-07] 71 sequences; 48,876,257 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq4 104 2e-17 >seq4 Length=1888314 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | ||| | |||||||| ||||| ||| ||||| ||||||||||| Sbjct 715888 CCACCACGGAGACGGAGAACCAAATGGAGAGTCGACTCCTTTTGGATGTTGTAATCACTC 715947 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 ||||| || | || |||||||| || || ||||| ||||| |||||||| || | || Sbjct 715948 AGTGTACGCCCATCCTCCAATTGCTTACCAGCAAAGATCAATCGCTGCTGGTCGGGTGGG 716007 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||| || ||||| || ||| | | |||| ||| | |||||| || ||||| Sbjct 716008 ATACCCTCCTTGTCTTGGATCTTC-GACTTGACATTGTCAATGGTGTCCGAAGACTCCAC 716066 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | || || || || || || || || || |||||||| |||||| Sbjct 716067 TTCCAATGTAATGGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCATA 716115 Score = 93.3 bits (102), Expect = 3e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||| | ||| | |||||||| ||||| ||| ||||| ||||||||||| || Sbjct 716115 ACCACCTCGGAGACGAAGAACCAAATGAAGAGTCGACTCCTTTTGAATGTTGTAATCTGA 716174 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | ||||| |||| || | ||| || || || || || | | |||||| || | || Sbjct 716175 CAAAGTGCGGCCGTCTTCAAGTTGCTTACCAGCGAAGATAAGTCTCTGCTGGTCGGGTGG 716234 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | || || || || ||| || | | |||| ||| | |||||| ||||| | Sbjct 716235 GATGCCCTCCTTATCCTGAATCTT-GGACTTGACATTGTCGATGGTGTCCGAAGATTCAA 716293 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| || || || || || || || ||||||||||||||| Sbjct 716294 CCTCCAGAGTGATAGTCTTTCCAGTCAAAGTCTTAACAAAGATCTGCATA 716343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703715568320