Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016-
01-07] 71 sequences; 48,876,257 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq4 104 6e-17
seq16 100 7e-16
seq7 84.2 5e-11
>seq4
Length=1888314
Score = 104 bits (114), Expect = 6e-17
Identities = 143/200 (72%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| || || | || ||||| || |||||| |||| || ||| ||| |||
Sbjct 716339 CAGATCTTTGTTAAGACTTTGACTGGAAAGACTATCACTCTGGAGGTTGAATCTTCGGAC 716280
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| |||||||| || || || || || || ||| ||
Sbjct 716279 ACCATCGACAATGTCAAGTCCAAGATTCAGGATAAGGAGGGCATCCCACCCGACCAGCAG 716220
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|||||||||||||| || ||||| | ||||| || | |||||| | ||||||||| |
Sbjct 716219 AGACTTATCTTCGCTGGTAAGCAACTTGAAGACGGCCGCACTTTGTCAGATTACAACATT 716160
Query 206353 CAGAAAGAGTCTACTCTTCA 206372
|| || ||||| ||||||||
Sbjct 716159 CAAAAGGAGTCGACTCTTCA 716140
Score = 91.5 bits (100), Expect = 3e-13
Identities = 134/190 (71%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
||| || || || || || || |||||| | || || ||| ||| || || ||||
Sbjct 716556 CAAGACCCTGACTGGCAAGACCATCACTCTTGAGGTCGAATCTTCCGATACCATCGACAA 716497
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||| |||||||| || || ||||| ||| || ||| ||| | || |||||
Sbjct 716496 CGTGAAGTCGAAGATTCAGGACAAGGAAGGCATTCCCCCTGACCAACAACGTCTCATCTT 716437
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
|||||| ||||| | || ||||| | ||| | |||| || ||| ||||||| |||||
Sbjct 716436 CGCCGGCAAGCAACTTGAGGATGGCCGAACTCTCTCCGACTATAACATCCAGAAGGAGTC 716377
Query 206364 TACTCTTCAC 206373
|| ||||||
Sbjct 716376 CACCCTTCAC 716367
>seq16
Length=1327714
Score = 100 bits (110), Expect = 7e-16
Identities = 139/195 (71%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
||| || ||||| || || || ||||| | || ||||| ||| || || ||||
Sbjct 332292 CAAGACCCTCACGGGCAAGACTATCACACTCGAGGTGGAGTCTTCCGATACCATCGACAA 332233
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||| || || ||||| || ||||||||| || ||| ||| | || |||||
Sbjct 332232 TGTCAAGTCCAAAATCCAAGACAAGGAAGGAATTCCACCCGACCAACAACGCCTGATCTT 332173
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
||| || ||||| | || ||||| | ||| | ||||||||||| ||||||| |||||
Sbjct 332172 CGCTGGCAAGCAACTCGAGGATGGCCGCACTCTCTCCGATTACAACATCCAGAAGGAGTC 332113
Query 206364 TACTCTTCACCTTGT 206378
|||||||| || ||
Sbjct 332112 GACTCTTCATCTCGT 332098
>seq7
Length=1615722
Score = 84.2 bits (92), Expect = 5e-11
Identities = 130/186 (70%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 101536 TTCAGCCACCTTCCGGAGGTAATTGTGCCTCTTCTCCTTTCTTAATCTCTCGAAACGAAG 101595
|||||| ||||| |||| ||||||||| | ||| || | ||| | | ||||||||||
Sbjct 650976 TTCAGCAACCTTTCGGACGTAATTGTGACGCTTTTCTTCTCTAAGACGAGCGAAACGAAG 651035
Query 101596 GGCAGATTGTCCTCCCCTCCCGTGTTTCTTTGGCAAAGAGACGTCAAAATTATGAAGAAT 101655
|||||||||||| || | ||||| ||||| |||| | ||| || || |||| ||
Sbjct 651036 GGCAGATTGTCCACCACGGCCGTGCTTCTTGGGCAGATCGACAGAGAACTTGTGAACAAC 651095
Query 101656 TTTCTTGGTGTTCCCAGAGAGAGTCGCGAAAAGAGCAGAAGAACCGTCAAGAATAATAAA 101715
| ||| || || || || |||| || ||| | |||||| | ||| || ||
Sbjct 651096 ATCACGGGTATTGCCGCTTAGGGTGCCGAACAGCGCACCATTACCGTCCATAATGATGAA 651155
Query 101716 TCCGAA 101721
|||||
Sbjct 651156 GCCGAA 651161
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181819724912391
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |