Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016- 01-07] 71 sequences; 48,876,257 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq42 87.8 2e-12 >seq42 Length=298824 Score = 87.8 bits (96), Expect = 2e-12 Identities = 187/277 (68%), Gaps = 2/277 (1%) Strand=Plus/Plus Query 138123 GGCAGCACGAATTTGAGTTACGTTGAGGCCGATGCCGCCTCCGTGTTTAGATATCATGGC 138182 || ||| || ||| || ||||||||||| || || || | | || || |||||||| Sbjct 243053 GGTAGCGCGGATTCGATGAACGTTGAGGCCAATTCCACCAGCATTCTTGGAAATCATGGC 243112 Query 138183 ACAATCGTTGAGAGTTCTATAGATGCCGTTTATGCTGTCTTCCTGGATGTTGAGTAGATA 138242 ||| || | || ||||| |||| || ||||| |||| |||| || || | Sbjct 243113 GCAAGTCTTCAATGTGTCGTAGATACCGTCGATACTGTCCTCCTTCATGTCGACAAGGAA 243172 Query 138243 ACACGACGACATTTGAGGCATTTTCA-TGCCAGCCGAGAATAGAGTGGGACTAGCGTGGG 138301 ||| || || | ||| ||| | | | | ||||| | ||| ||||| || ||| || | Sbjct 243173 ACATGAAGAGAGTTG-GGCTTGTGGAGTACCAGCAGCGAAGAGAGTTGGGGAAGCATGCG 243231 Query 138302 TAAACATTTTCGAGCGCATCAATCTATATGACTCGATCGCACTCTCGATATCATCACCAT 138361 | || ||| | ||||| | |||| ||| |||||| ||||||||| ||||| | Sbjct 243232 TGAAGCACTTCTGGGACATCAGATTGTATGTCTCAATCGCAGCCTCGATATCTTCACCGT 243291 Query 138362 GAATCTGAAGAGCGACACGCATCAGCATGTGTTGAGG 138398 |||| | || || ||||| | ||||||||| || Sbjct 243292 GAATGCCGACTGCTACTCGCATAATCATGTGTTGTGG 243328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445094004978720