Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016-
01-07] 71 sequences; 48,876,257 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq4 129 8e-24
>seq4
Length=1888314
Score = 129 bits (142), Expect = 8e-24
Identities = 212/300 (71%), Gaps = 13/300 (4%)
Strand=Plus/Minus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| ||| | |||||| || ||||||||||| || || ||||||||||| ||| | || |
Sbjct 1225040 GATCTGGCAGATGTAC-AAGAAGGCCGAGGCGTCTTTCTGGACCGCCGAAGAGATTGATC 1224982
Query 1455835 T--CGGCGC--CGACACGGTCCACTGGGTGTC---GCTGAGCGACGACGAGCGCCATTTC 1455887
| || | | |||| ||||| ||| | ||||||||||| | |||
Sbjct 1224981 TATCGAAGGATCTCCACG----ACTGGAACAACAAGCTCAATGACGACGAGCGTTACTTC 1224926
Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947
||| |||||||||| | || ||||| || |||||| || || ||||||| |||
Sbjct 1224925 ATCTCCCACGTCCTCG-CATTCTTCGCTGCATCCGATGGAATTGTCAACGAGAACTTGGT 1224867
Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007
|| ||||| | |||||||| | || ||||| |||| || ||||| ||||| ||
Sbjct 1224866 CGAGCGCTTCAGTGGTGAGGTCCAGATCCCTGAGGCTCGTTGCTTCTACGGATTCCAAAT 1224807
Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067
| || || || |||||||| || || ||||| || || |||||||| ||| |||||||
Sbjct 1224806 CATGATGGAGAATATCCACTCCGAGACATACTCCCTTCTCATCGACACATACATCAAGGA 1224747
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177804351919502
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |