Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016-
01-07] 71 sequences; 48,876,257 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq4 102 8e-17
seq42 98.7 1e-15
seq37 98.7 1e-15
>seq4
Length=1888314
Score = 102 bits (112), Expect = 8e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| |||| ||| || | || | || || || || ||||||||||||||||| || | |
Sbjct 716116 CCACCTCGGAGACGAAGAACCAAATGAAGAGTCGACTCCTTTTGAATGTTGTAATCTGAC 716175
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| ||| | ||| || || || || || || || || | | |||||| ||||| ||
Sbjct 716176 AA-AGTGCGGCCGTCTTCAAGTTGCTTACCAGCGAAGATAAGTCTCTGCTGGTCGGGTGG 716234
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
||||| || || || ||||| || ||||| ||| | ||||| || ||||| ||
Sbjct 716235 GATGCCCTCCTTATCCTGAATCTTGGACTTGACATTGTCGATGGTGTCCGAAGATTCAAC 716294
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| ||||| || || || || || ||||| ||||| || || |||||
Sbjct 716295 CTCCAGAGTGATAGTCTTTCCAGTCAAAGTCTTAACAAAGATCTGCAT 716342
>seq42
Length=298824
Score = 98.7 bits (108), Expect = 1e-15
Identities = 280/422 (66%), Gaps = 9/422 (2%)
Strand=Plus/Minus
Query 7564 CAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTG 7623
||||||||| | |||| || || || ||||||||||| ||||| || || || || |
Sbjct 243325 CAACACATGATTATGCGAGTAGCAGTCGGCATTCACGGTGAAGATATCGAGGCTGCGATT 243266
Query 7624 GAAACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCC 7683
|| || ||| | ||||||| ||| || ||||| ||||| || || | || ||
Sbjct 243265 GAGACATACAATCTGATGTCCCAGAAGTGCTTCACGCATGCTTCCCCAACTCTCTTCGCT 243206
Query 7684 GCGGGCAC-AAACGCGCCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAG 7742
|| || || || ||| ||| | || || ||||| | | |||| || |||||
Sbjct 243205 GCTGGTACTCCACAAGCC-CAACTCTCTTCATGTTTCCTTGTCGACATGAAGGAGGACAG 243147
Query 7743 CATCGACGGCATTTACAACACGCTGCGCGATTGCGCCAATATTTCCAAATACGGCGGCGG 7802
|||||||| || ||| |||| || |||||||| |||||||| | | || ||
Sbjct 243146 TATCGACGGTATCTACGACACATTGAAGACTTGCGCCATGATTTCCAAGAATGCTGGTGG 243087
Query 7803 AATAGGTCTGAACG-TAAACGACGTGCGCGCCAACGGTAGCC-GCATCGTGTCCACCAAC 7860
||| || || |||| | | ||| | ||||| | ||| |||| ||| | || ||
Sbjct 243086 AATTGGCCTCAACGTTCATCGA-ATCCGCGCTACCGG-AGCCTACATTGCAGGAACAAAT 243029
Query 7861 GGAAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTA 7920
|| || | | ||| | | |||||| | || || ||||| ||| | | || | ||
Sbjct 243028 GGTAACTCGAACGGCATCGTCCCCATGCTCCGAGTCTTCAACAACACTGCTCGTTACGTT 242969
Query 7921 GACCAGGGGGG---AAAGCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCG 7977
||||| || || ||||| ||| || || |||||| | ||||| ||||||||
Sbjct 242968 GACCAAGGTGGTAACAAGCGACCAGGTGCTTTCGCTATCTATCTTGAGCCATGGCACGCC 242909
Query 7978 GA 7979
||
Sbjct 242908 GA 242907
>seq37
Length=479966
Score = 98.7 bits (108), Expect = 1e-15
Identities = 138/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 134520 GATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCA 134579
|| ||||||||||||||||||||| | |||| | || || || || || | |||
Sbjct 404102 GACTCCTTTTGAATGTTGTAGTCGGATAGGGTGCGGCTATCTTCAAGTTGCTTACTAGCA 404161
Query 134580 AAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACC 134639
||||| | | |||||| ||||| || || || || || || ||||| || |||||
Sbjct 404162 AAAATAAGTCTCTGCTGGTCGGGTGGGATACCCTCCTTATCCTGAATCTTGGACTTGACG 404221
Query 134640 GCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTA 134699
||| | ||||| || ||||| || || | ||| || || || || || || || |||
Sbjct 404222 TTGTCGATAGTGTCCGAAGATTCAACCTCCAAAGTGATAGTCTTTCCAGTCAAGGTCTTA 404281
Query 134700 ACGAAAATTTGCAT 134713
|| || ||||||||
Sbjct 404282 ACAAAGATTTGCAT 404295
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505397951458920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |