Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016-
01-07] 71 sequences; 48,876,257 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq42 342 7e-89
>seq42
Length=298824
Score = 342 bits (378), Expect = 7e-89
Identities = 1337/2075 (64%), Gaps = 69/2075 (3%)
Strand=Plus/Plus
Query 68374 GTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGA 68433
|||||||| || || | || || | | ||||| ||||||||||| || |||||||||
Sbjct 241572 GTAAACTGGATAGGAGCTGAAGCAGCCATGGTACGGAGATAGTACATGCCAGTTTTCAGA 241631
Query 68434 CCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATA 68493
|| | |||| || ||| |||||||| || | ||| | ||||| ||
Sbjct 241632 CCCAACTTCCAGCCAGCGAAGTGCATACTGGTGATCTTGCCCATTGTGGGATCCTTCATG 241691
Query 68494 TGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATA 68553
||||| ||||||||||| ||| || ||| |||| || | || || ||||||| |
Sbjct 241692 TGAATGTTCATCGATTGTGATTGGTCAATGTAAGCACCACGGTCAGCGGCCATTTGGACG 241751
Query 68554 ATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAAGG 68613
|| | || | |||||||||| ||||| ||| ||||||||| |||| | |
Sbjct 241752 ATGGTTCGCTGTGAGATTTCCCAAACGGTCTTGTAAAGAGCCTTGATATCAGCTGGGATG 241811
Query 68614 CTCG---TATTTTGAATGGATCCACCATCGGATATAATTATATTCTTGATCTCATCATTC 68670
| | | || ||||| ||||||||||||| || || ||||| || | ||| |
Sbjct 241812 TTGGGGATGTTCTGAATCGATCCACCATCGGCAATGATACGGTTCTTCATGTTGTCAGAC 241871
Query 68671 CACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCCCA 68730
|| | | || | | | | || | || || || | ||| || || |||
Sbjct 241872 CAGAGACCCATGTCAACAAGATCCTTGAGCAACCATGGGTTGACGACTTGGAACTCGCCA 241931
Query 68731 GATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTTCCC 68790
| | || | ||||| ||| || || |||||||| || | | ||||| ||
Sbjct 241932 GCAAGAACACGACGAGAGTAGATGTTGGACGTATATGGCTCAAAGCACTCATTGAAGCCA 241991
Query 68791 AGAATTTGAGCAGTTGATG-CAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 68849
||||||||| | | || || ||||||||||||| || || | || ||||| | ||||||
Sbjct 241992 AGAATTTGA-CTGGTGCTGGCAGTTGGCATAGGAGCGACAAGCAAGCTATTGCGAAGACC 242050
Query 68850 ATGTGTTATGATTTTAT-CTTTTAGATGTTTCCAATCCCAAAGATCAGATGGTACAACAT 68908
|||| ||||||| | ||| || ||| ||||||||| ||||| | ||| ||||
Sbjct 242051 ATGTTGCTTGATTTTCTGCTTCAAGCTGTC-CCAATCCCAGAGATCTGTTGGAGTAACAC 242109
Query 68909 TCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTATATGTTTCATAAG 68968
||| | ||| || || | || || ||| || || | | |||| |||||||
Sbjct 242110 CCCACATATCATACTGCAACTCGCCCTTGGAGGCAGGAGAACCCTCAAATGTCTCATAAG 242169
Query 68969 GTCCTTCCTGTTCAGCTAGTTCACAACTT--GCCTCTAATGCACCGTAATAAATTGTTTC 69026
|| || | || || ||| ||| || | ||| | | || || || ||
Sbjct 242170 TGCCATCAACCTTGGCAAGCTCA--ACTGAAGCAGTGAGTGCGGCATGGTAGATGGTCTC 242227
Query 69027 GAAAATCTTCTTATTGAGAT-CTTGTGCTTCTAGACTATCGAATGGATAATGTAAAAG-- 69083
||| || | | ||||| | |||| || ||| || ||||||||| | | || ||
Sbjct 242228 GAAGATTTGAATGTTGAGGTGCTTG-GCCTCTGGAGAGTCGAATGGAAGACG-AAGAGCC 242285
Query 69084 AATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTATTTGA 69143
|| ||| ||||| || | ||||| || |||| ||||||||| || | ||
Sbjct 242286 AAGAAA-GCATCAGCAAGACCCTGGACACCAACGGCGATAGGTCGGTGGCGGAAGTTGCT 242344
Query 69144 ACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGATTTCGGAC 69203
|| | ||||| |||| ||| ||||| || | ||| || || || || | || |||
Sbjct 242345 TCTCTTGGCTTCGGGAACAGGGTAATAGTTGACATCAATGATCTTGTTCAAGTTCTTGAC 242404
Query 69204 TACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAA-------TCGTCCATCTATAA 69256
|| |||| || || | ||| | | || ||| | | || ||| | |
Sbjct 242405 AACGACTTGGCAGACTTCGTGAAGTCTCTGGAAGTCATAAGTGCCGTTGTTCATGTCGA- 242463
Query 69257 CAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTTGCA- 69315
|| | || || || | || || | || || || || ||||||| | | |||
Sbjct 242464 CATAGGTAGGAAGGGCAAGTGAAGCCAAGTTGCAGACGGCAACCTCATCTGGA---GCAC 242520
Query 69316 --TATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGAT 69373
|| | | ||||| || || || || | | ||| || || ||||| | ||| |
Sbjct 242521 AGTACTCAACAATCTCAGTGCAGAGGTTCGAGCTTCGGATGGTACCGAGATTCTTCTGGT 242580
Query 69374 TACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAG 69433
| |||||| |||| || || ||||||||||| || || ||| | ||||| || ||||||
Sbjct 242581 TGCTCTTTCTGTTGCAAGCATCCTTGTAAAGCATGAAGGGATTGCCAGTCTCGGTCTGAG 242640
Query 69434 ATTCGATAATAGATTTCCAAACGACCCTA---GCATTTATTACGGTCTTGTAACGCTTCT 69490
|| | || || | ||| || | | || || || ||||||| || |||
Sbjct 242641 CCTCCAGGATGGAGTACCA---GAGCTTTTGCGCCTTGAT---GGTCTTGCGACCCTTAC 242694
Query 69491 CTTTT---TCATATTGT--GTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAA 69545
||| ||||| || ||| | |||| ||||||||||| || | |||||| ||||
Sbjct 242695 CTTCGCGCTCATACTGCTCGTAGAGAGCC--TCGAATTCATCGCCATAGACATCAGCCAA 242752
Query 69546 TCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCAT 69605
|| || || ||||| || |||||||| | |||| | ||| | | |||||| |||||
Sbjct 242753 GCCTGGGCACTCATTGGGGCACATCAAAGTCCACTCGCCATTCTTTTCAACTCGCTTCAT 242812
Query 69606 AAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCC 69665
|| ||||| |||||||| || || |||||||| | | || || || || ||
Sbjct 242813 GAAAAGATCAGGAATCCACAGGGCGTAGAAGAGATCACGAGCTCGGACCTCCTCCTTGCC 242872
Query 69666 TGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATAT 69725
||| ||| |||||| || |||| | | ||| | |||||||| || ||||| ||
Sbjct 242873 GTGATTCTTTCGAAGATCAAGGTACTCGAAGACATCGGCGTGCCATGGCTCAAGATAGAT 242932
Query 69726 CGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATA 69785
|| | | || ||||| || || || || || || | ||| | |||||||| || |
Sbjct 242933 AGCGAAAGCACCTGGTCGCTTGTTACCACCTTGGTCAACGTAACGAGCAGTGTTGTTGAA 242992
Query 69786 GACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCC 69845
||||| ||||| || | || || || || |||||||||||||| | ||| || |||
Sbjct 242993 GACTCGGAGCATGGGGACGATGCCGTTCGAGTTACCATTTGTTCCTGCAATGTAGGCTCC 243052
Query 69846 TCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGC 69905
| ||||| || | || || || ||||| || || | || || || | ||
Sbjct 243053 GGTAGCGCGGATTCGATGAACGTTGAGGCCAATTCCACCAGCATTCTTGGAAATCATGGC 243112
Query 69906 ACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAA 69965
||| ||||||||||| || ||||| || || || || || |||||| | ||| ||
Sbjct 243113 GCAAGTCTTCAATGTGTCGTAGATACCGTCGATACTGTCCTCCTTCATGTCGACAAGGAA 243172
Query 69966 ACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGT 70025
||| ||| | ||| ||| ||| || ||| || | || || || || || ||
Sbjct 243173 ACATGAAGAGAGTTGGGCTTGTGGAGTACCAGCAGCGAAGAGAGTTGGGGAAGCATGCGT 243232
Query 70026 GAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATC-CCACTGAT 70084
||| || || | || | |||||||||||| ||||| || | || ||||| ||| | |
Sbjct 243233 GAAGCACTTCTGGGACATCAGATTGTATGTCTCAATCGCAGCCTCGATATCTTCACCG-T 243291
Query 70085 GAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTA 70144
|||| || | || || ||||| | ||| || || || ||||| | || ||| |
Sbjct 243292 GAATGCCGACTGCTACTCGCATAATCATGTGTTGTGGGCGTTCGCAGATCTTGCCATTGA 243351
Query 70145 TTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTA--TGAAAAGTC 70202
| ||||||||| || ||||| || || ||||| || | ||| ||||| ||
Sbjct 243352 GGCGGAGGAGGTATGATCGCTCGAGAGTCTTGAAGCCAAAGTATTGGTAATTGAAA--TC 243409
Query 70203 TCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTGGTAACTATATCCATAAC 70262
|| ||||| | |||| | ||||| |||| ||| | ||| ||| || |
Sbjct 243410 TCGGTCGTAGACAATAGCGGAATTAAGTTCTGCCTCGTGCTTGATAA-------CACACT 243462
Query 70263 AGTAGGTG-------AGATAATCGGAGATCGTTTACCATTTTTAGGATTAACATAGTTGA 70315
||| ||| ||| || ||||| | || ||||| |||||| || ||||||
Sbjct 243463 TGTATGTGGCCTCGCTGATCATAGGAGAAAGCTTGCCATTCCGAGGATTGACGTAGTTGT 243522
Query 70316 ATAAATCTTCCATTACA-TCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATG 70374
| | ||| || ||| || || | | || || || | |||||| | || || |
Sbjct 243523 AGAGGTCTGATATCACAGTCGAGAACT-GCTTCTTGGTCTGCTTGTGGAGGTTGGAGACT 243581
Query 70375 GCTATTCTGGCTGCTAGAATAGCATAGTCAGGATG 70409
|| |||| || || || || |||||||| |||||
Sbjct 243582 GCAATTCGTGCAGCGAGGATGGCATAGTCGGGATG 243616
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686908190368440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |