Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016-
01-07] 71 sequences; 48,876,257 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq15 93.3 3e-14
>seq15
Length=1331786
Score = 93.3 bits (102), Expect = 3e-14
Identities = 310/480 (65%), Gaps = 17/480 (4%)
Strand=Plus/Plus
Query 19234 GACATGCAAATTGGAGGATTGAGTAAAGAGTTTTCTGAAATCTTTCGTAGAGCATTTGTG 19293
|| ||| |||||| || | || |||||| || ||||| || ||||| || |
Sbjct 495106 GATATGGGAATTGGTGGTCTAGATACAGAGTTCAGTGCCATCTTCCGAAGAGCCTTCGCT 495165
Query 19294 TCGCGTGTTTTTTCTGCAGATGTCATTAAACAATTGGGATGTAAACATGTTCGTGGACTT 19353
|| ||| | || || | | | | ||| | ||||||| | | || || || ||
Sbjct 495166 TCACGTATCTTCCCTCCGGGTTTGATTGAGAAATTGGGTATTCAGCACGTGAAGGGTATT 495225
Query 19354 TTGCTTTATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAAATTA 19413
|||||||||| || || ||| ||||| || | |||||| | || || | ||| |
Sbjct 495226 CTGCTTTATGGACCTCCTGGTACCGGAAAGACGCTTATTGCGCGTCAAATTGGAAAAATG 495285
Query 19414 CTTA---CAAAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTA 19470
| | | | | | || ||| | | || ||||| ||| | | ||||| |||||
Sbjct 495286 TTGAATTCGAGAGAGCCG---AAAGTCATCAACGGTCCAGAAGTGCTGAATAAGTATGTC 495342
Query 19471 GGTCAATCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGT 19530
|||||||| ||||| ||| | ||| | || || || ||||| |||| | | || |
Sbjct 495343 GGTCAATCAGAAGAGAATATTCGAAAGCTCTTCGCGGATGCTGA-GAAGGAGTATAAAGA 495401
Query 19531 TTAGGGCG-CAAAAGTTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAA 19589
| || | | | || | ||||| || || | ||||| ||||| || |||||||
Sbjct 495402 GAAAGGAGACGAGAGCGGACTCCACATCATCATTTTCGATGAGTTGGATGCGGTCTGTAA 495461
Query 19590 GCAAAGAGGTTC---------TGGTGTAAATGGAGTACATGACACTGTTGTCAATCAACT 19640
|| |||||| ||||| || ||| || |||| |||||||||||| |
Sbjct 495462 ACAGAGAGGTAGCGGAGCTGGTGGTGGAACTGGTGTCGGCGACAGCGTTGTCAATCAATT 495521
Query 19641 CCTGTCAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAA 19700
||||| ||| | || ||||| | ||||| || |||||| | | ||||| ||||| ||
Sbjct 495522 GCTGTCGAAACTCGATGGTGTGGATCAACTCAACAATATTCTGTTGATTGGAATGACCAA 495581
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397455656076355
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |