Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016- 01-07] 71 sequences; 48,876,257 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq15 93.3 3e-14 >seq15 Length=1331786 Score = 93.3 bits (102), Expect = 3e-14 Identities = 310/480 (65%), Gaps = 17/480 (4%) Strand=Plus/Plus Query 19234 GACATGCAAATTGGAGGATTGAGTAAAGAGTTTTCTGAAATCTTTCGTAGAGCATTTGTG 19293 || ||| |||||| || | || |||||| || ||||| || ||||| || | Sbjct 495106 GATATGGGAATTGGTGGTCTAGATACAGAGTTCAGTGCCATCTTCCGAAGAGCCTTCGCT 495165 Query 19294 TCGCGTGTTTTTTCTGCAGATGTCATTAAACAATTGGGATGTAAACATGTTCGTGGACTT 19353 || ||| | || || | | | | ||| | ||||||| | | || || || || Sbjct 495166 TCACGTATCTTCCCTCCGGGTTTGATTGAGAAATTGGGTATTCAGCACGTGAAGGGTATT 495225 Query 19354 TTGCTTTATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAAATTA 19413 |||||||||| || || ||| ||||| || | |||||| | || || | ||| | Sbjct 495226 CTGCTTTATGGACCTCCTGGTACCGGAAAGACGCTTATTGCGCGTCAAATTGGAAAAATG 495285 Query 19414 CTTA---CAAAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTA 19470 | | | | | | || ||| | | || ||||| ||| | | ||||| ||||| Sbjct 495286 TTGAATTCGAGAGAGCCG---AAAGTCATCAACGGTCCAGAAGTGCTGAATAAGTATGTC 495342 Query 19471 GGTCAATCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGT 19530 |||||||| ||||| ||| | ||| | || || || ||||| |||| | | || | Sbjct 495343 GGTCAATCAGAAGAGAATATTCGAAAGCTCTTCGCGGATGCTGA-GAAGGAGTATAAAGA 495401 Query 19531 TTAGGGCG-CAAAAGTTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAA 19589 | || | | | || | ||||| || || | ||||| ||||| || ||||||| Sbjct 495402 GAAAGGAGACGAGAGCGGACTCCACATCATCATTTTCGATGAGTTGGATGCGGTCTGTAA 495461 Query 19590 GCAAAGAGGTTC---------TGGTGTAAATGGAGTACATGACACTGTTGTCAATCAACT 19640 || |||||| ||||| || ||| || |||| |||||||||||| | Sbjct 495462 ACAGAGAGGTAGCGGAGCTGGTGGTGGAACTGGTGTCGGCGACAGCGTTGTCAATCAATT 495521 Query 19641 CCTGTCAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAA 19700 ||||| ||| | || ||||| | ||||| || |||||| | | ||||| ||||| || Sbjct 495522 GCTGTCGAAACTCGATGGTGTGGATCAACTCAACAATATTCTGTTGATTGGAATGACCAA 495581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455656076355