Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016-
01-07] 71 sequences; 48,876,257 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq4 93.3 1e-13
seq42 84.2 7e-11
>seq4
Length=1888314
Score = 93.3 bits (102), Expect = 1e-13
Identities = 118/161 (73%), Gaps = 1/161 (1%)
Strand=Plus/Minus
Query 443709 CGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCAT 443768
|| || ||||| || || | ||||| || | || || || || ||| || |||||
Sbjct 1224583 CGTCTCGTCGCATTCGCCGCCGTCGAGGGTATCTTCTTCAGTGGTTCCTTC-GCGTCCAT 1224525
Query 443769 CTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAG 443828
|||||||||||| |||||||| |||||| ||||| ||||| || ||||| |||
Sbjct 1224524 CTTCTGGTTGAAGAAGCGTGGTCTTATGGCTGGTCTTACCTTCTCCAATGAACTCATCTC 1224465
Query 443829 TCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCT 443869
||| ||||||||| | || |||||| || || |||||||
Sbjct 1224464 TCGTGACGAGGGTCTCCACACCGACTTTGCTTGCCTTCTCT 1224424
>seq42
Length=298824
Score = 84.2 bits (92), Expect = 7e-11
Identities = 85/111 (77%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 254971 CGGCATTATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGG 255030
|||||| | || ||| |||| || ||||||||| ||||| ||||| || ||||| ||
Sbjct 243017 CGGCATCGTCCCCATGCTCCGAGTCTTCAACAACACTGCTCGTTACGTTGACCAAGGTGG 242958
Query 255031 CGGCAAACGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGA 255081
||| || ||||| || ||| | ||||| || ||||| |||||||||||
Sbjct 242957 TAACAAGCGACCAGGTGCTTTCGCTATCTATCTTGAGCCATGGCACGCCGA 242907
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588334555110595
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |