Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016-
01-07] 71 sequences; 48,876,257 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq42 268 1e-66
seq4 114 2e-20
>seq42
Length=298824
Score = 268 bits (296), Expect = 1e-66
Identities = 1180/1822 (65%), Gaps = 67/1822 (4%)
Strand=Plus/Plus
Query 110363 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGCATAGAAGAG 110422
|||||||||||||| || || || || || ||||| | | |||||| | |
Sbjct 241605 CGGAGATAGTACATGCCAGTTTTCAGACCCAACTTCCAGCCAGCGAAGTGCATACTGGTG 241664
Query 110423 AGCTTGGACATCGTTGGACTTTCCATGAAGAGGTTCATACTTTGACTTTGGTCAATG-AA 110481
| |||| ||| || ||| | |||| | |||||| ||| |||||||||| ||
Sbjct 241665 ATCTTGCCCATTGTGGGATCCTTCATGTGAATGTTCATCGATTGTGATTGGTCAATGTAA 241724
Query 110482 GCGCCCCCGTTGTGCCGCCATATCAATGACATCCTTCA-TCTTA-ATTTCCCAAACTGTG 110539
|| || | || || ||||| | | || | ||| | | | ||||||||||| ||
Sbjct 241725 GCACCACGGTCA-GCGGCCATTTGGACGA--TGGTTCGCTGTGAGATTTCCCAAACGGTC 241781
Query 110540 CGATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCGCC 110599
|| ||| |||||||||| ||||||| | | ||| ||||| || || || || |
Sbjct 241782 TTGTAAAGAGCCTTGATATCAGCTGGGATGTTGGGGATGTTCTGAATCGATCCACCATCG 241841
Query 110600 TTCACCATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACG 110659
| || | | |||||| | | ||||||||||| || | || || ||||
Sbjct 241842 GCAATGATACGGTTCTTCATGTTGTCAGACCAGAGACCCATGTCAACAAGATCCTTGAGC 241901
Query 110660 AGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTT 110719
| |||||| | ||||| || || || | | ||||||||| |
Sbjct 241902 AACCATGGGTTGACGACTTGGAACTCGCCAGCAAGAACACGACGAGAGTAGATGTTGGAC 241961
Query 110720 GTGTATGGTTCAAAGCATTCATTATTACCCAAGA-TTTGTGCGGTGGAGGCTGTTGGCAT 110778
|| ||||| |||||||| ||||| | |||||| |||| |||| ||| ||||||||
Sbjct 241962 GTATATGGCTCAAAGCACTCATTGA-AGCCAAGAATTTGACTGGTGCTGGCAGTTGGCAT 242020
Query 110779 TGGTGCCATCAA--AAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACA 110836
|| || | ||| ||| || || |||||||| | | |||||| | ||| |
Sbjct 242021 AGGAGCGA-CAAGCAAG-CTATTGCGAAGACCATGTTGCTTGATTTTCTGCTTCAAGCTG 242078
Query 110837 TCCCAGTCGTAGTTGAGCT--TGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTT 110894
||||| || || || || ||| | || ||||||| ||| |||| | | | || |
Sbjct 242079 TCCCAATCCCAGA-GATCTGTTGGAGTAACAC-CCCACATATCATACTGCAACTCGCCCT 242136
Query 110895 GGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGC 110954
||| || |||||||||||||| || ||||| | || | || || || |||
Sbjct 242137 TGGAGGCAGGAGAACCCTCAAATGTCTCATAAGTGCCAT------CAACCTTGGCA-AGC 242189
Query 110955 TCGCCTC---CAGGGA-TGCG---TGATACATGGTTTCAAAGATACGAGCATTCATCTCC 111007
|| || ||| || |||| || || ||||| || ||||| || || | | |
Sbjct 242190 TCAACTGAAGCAGTGAGTGCGGCATGGTAGATGGTCTCGAAGATTTGAATGTTGAGGTGC 242249
Query 111008 TTGGCTTCATCTGAATCAAATGCGTAGCGGCACAA--AATAAATACATCCGCGAGACCTT 111065
||||| || || || |||| | || | | | || ||| |||| || ||||| |
Sbjct 242250 TTGGCCTCTGGAGAGTCGAATG-GAAGACGAAGAGCCAAGAAAG-CATCAGCAAGACCCT 242307
Query 111066 GAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC-AACGGGA 111124
| ||||| | | ||||||| ||| || | || | | || | || ||| ||
Sbjct 242308 GGACACCAACGGCGATAGGTCGGTGGCGGAAGTT-GCTTCTCTTGGCTTCGGGAACAGGG 242366
Query 111125 TAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGT-GATTTCATG 111183
||| | || ||||||| ||| | || ||| ||| | ||| | || ||| ||
Sbjct 242367 TAATAGTTGACATCAATGATCTTGTTCAAGTTCTTGACAACGA-CTTGGCAGACTTCGTG 242425
Query 111184 AAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATT--GACATACTTTGGAAGGGCGATT 111241
|||| | | | ||| |||||| || | ||||| |||||| | |||||||| | |
Sbjct 242426 AAGTCTCTGGAAGTCATAAGTGCC-GT-TGTTCATGTCGACATAGGTAGGAAGGGCAAGT 242483
Query 111242 GATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACAT 111301
|| ||||| ||||| || || |||||| | | |||||| | ||| || || ||
Sbjct 242484 GAAGCCAAGTTGCAGACGGCAACCTCATCTGGAGCACAGTACTCAACAATCTCAGTGCAG 242543
Query 111302 AAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCC 111361
| ||| || || || || || | |||||| ||||| ||||| ||||||| ||||||
Sbjct 242544 AGGTTCGAGCTTCGGATGGTACCGAGATTCTTCTGGTTGCTCTTTCTGTTGCAAGCATCC 242603
Query 111362 TTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAA-C 111420
||||| |||||| |||| | || ||||| ||||| | | || || | | ||| | |
Sbjct 242604 TTGTAAAGCATGAAGGGATTGCCAGTCTCGGTCTGAGCCTCCAGGATGGAGTACCAGAGC 242663
Query 111421 ATCGGCGGCTGGTACAATGGCGTTGG--CCCGTCCCTCCGC-CTCGTACTTTGTGTAGAG 111477
| ||| || | |||| ||| ||| | ||| ||| ||| |||| ||||||
Sbjct 242664 TTTTGCGCCTTG----ATGGTCTTGCGACCCTTACCTTCGCGCTCATACTGCTCGTAGAG 242719
Query 111478 GGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAG 111537
|| || || || || || | || | | ||||| || | || || | |
Sbjct 242720 AGCCTCGAATTCATCGCCATAGACATCAGCCAAGCCTGGGCACTCATTGGGGCACATCAA 242779
Query 111538 AGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGA 111597
|| ||| | ||| | ||||| |||||||||||||| || ||||||||||||| |
Sbjct 242780 AGTCCACTCGCCATTCTTTTCAACTCGCTTCATGAAAAGATCAGGAATCCACAGGGCGTA 242839
Query 111598 AAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTC 111657
|||||||| | | || |||| || | || || || ||| | |||||| ||||
Sbjct 242840 GAAGAGATCACGAGCTCGGACCTCCTCCTTGCCGTGATTCTTTCGAAGATCAAGGTACTC 242899
Query 111658 CATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC----- 111712
| || ||| |||||||||||||||||||||| |||| || || | | |||
Sbjct 242900 GAAGACATCGGCGTGCCATGGCTCAAGATAGATAGCGAAAGCACC---TGGTCGCTTGTT 242956
Query 111713 -CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACC 111771
||| |||| | || || || || ||| ||| || || || ||||| || | || ||
Sbjct 242957 ACCACCTTGGTCAACGTAACGAGCAGTGTTGTTGAAGACTCGGAGCATGGGGACGATGCC 243016
Query 111772 ATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTG 111831
| || | ||||||||| || ||| | | | || | | ||| | ||
Sbjct 243017 GTTCGAGTTACCATTTGTTCCTGCAATGTAGGCTCCGGTAGCGCGGATTCGATGAACGTT 243076
Query 111832 CATCCCAATACCCCCAGCCCACTTTGAGAT--TTGCGCACACTCCGTAAGAGTTCCATAG 111889
| ||||| || ||||| ||| || || | ||||| | | | | | || | |||
Sbjct 243077 GAGGCCAATTCCACCAGCATTCTTGGAAATCATGGCGCA-AGT-CTTCAATGTGTCGTAG 243134
Query 111890 ATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTT 111949
||||||| ||| ||||||||| || ||| |||||| || || | || | | |
Sbjct 243135 ATACCGTCGATACTGTCCTCCTTCATGTCGACAAGGAAACATGAAGAGAGTTGGGCTTGT 243194
Query 111950 GGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAA-CATACCTTGGGACATCTT 112008
|| ||||||||| |||||| ||||| | || || |||| || | |||||||||
Sbjct 243195 GGAGTACCAGCAGCGAAGAGAGTTGGGGAAGCATGCGTGAAGCACTTC-TGGGACATCAG 243253
Query 112009 GTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCAT 112068
| ||||||||| | ||| || || ||||| ||||| ||||||| ||| || |||||
Sbjct 243254 ATTGTATGTCTCAATCGCAGCCTCGATATCTTCACCGTGAATGCCGACTGCTACTCGCAT 243313
Query 112069 GAACATGTACTGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATA-GCTCTTCT 112127
| ||||| |||||| ||| || |||||| ||| || | || || | || ||
Sbjct 243314 AATCATGTGTTGTGGGCGTTCGCAGATCTTGCCATTGAGGCGGAGGAGGTATGATC-GCT 243372
Query 112128 CAAGGGTTTTGAGACCAAAGTA 112149
| || || |||| ||||||||
Sbjct 243373 CGAGAGTCTTGAAGCCAAAGTA 243394
>seq4
Length=1888314
Score = 114 bits (126), Expect = 2e-20
Identities = 342/521 (66%), Gaps = 24/521 (5%)
Strand=Plus/Plus
Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430
||||| || || ||||||||||||||||| ||||| ||| | || ||||| ||||||
Sbjct 1224147 TAGTCACCAACGCGCTTCTCAAAGAAGTTAGTCTTGCCAGCGAGCGAGATGTTCTCCATA 1224206
Query 122431 AAGTCAAATGGATT------CTTCGCG---TTCCAAATGG-GTGGCACCCCAACTTGTTT 122480
||||||||||| || ||| | ||| | || | || |||
Sbjct 1224207 AAGTCAAATGGGTTGGCAGACTTGTAGACCTTCTCATTGCCGAGGG----CAAGA----- 1224257
Query 122481 GAGGAGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGAT 122540
|| |||||||| | || |||| ||||| | |||| | |||||||| || |
Sbjct 1224258 -AGCAGACGATCAGCGACGAACTCGATGTATTGCTTCATCAGATTCGAGTTCATGCCAAG 1224316
Query 122541 GAGGTTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCAC 122600
||| ||| || || || || | |||| ||| ||||||||| || || || | |
Sbjct 1224317 GAGTGCACAAGGAAGAGCCTCAGTCAAGAACTCTTGCTCAATCTCGACAGCTTCGGTAAT 1224376
Query 122601 GATGGCGTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGC 122660
|| | | |||| || || | | || | | ||| |||||| ||
Sbjct 1224377 GACGTCTTGGACAGCTTGCTTGCTTGGGCGGTGCTTCAAGTGAGAGAAGAGAAGGCAAGC 1224436
Query 122661 AAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGG 122720
||| || |||||||||||| || || || || |||||||| |||||| ||||| |
Sbjct 1224437 AAAGTCGGTGTGGAGACCCTCGTCACGAGAGATGAGTTCATTGGAGAAGGTAAGACCAGC 1224496
Query 122721 CATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATAC 122779
||| ||||| |||||||||||||| | || | ||| ||| || || |||||||||||
Sbjct 1224497 CATAAGACCACGCTTCTTCAACCAGAAGATGGACGC-GAAGGAACCACTGAAGAAGATAC 1224555
Query 122780 CCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAA-GGAGCGAGACTTTGCATCAAAC 122838
|||| || || || || | || |||| || || | || | ||| | | || |
Sbjct 1224556 CCTCGACGGCGGCGAATGCGACGAGACGTTGAGCAAATGTAGAG-TTCTTGTCTTGAATC 1224614
Query 122839 CATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTAC 122879
|| || | ||||| | |||||||||| |||||||| ||
Sbjct 1224615 CACTTGACAGCCCAGTCGGCCTTCTTCTTGATACATGGAAC 1224655
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628031442621600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |