Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016-
01-07] 71 sequences; 48,876,257 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq42 179 5e-40
seq4 158 1e-33
seq7 89.7 6e-13
>seq42
Length=298824
Score = 179 bits (198), Expect = 5e-40
Identities = 1131/1768 (64%), Gaps = 82/1768 (5%)
Strand=Plus/Plus
Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896
||||| |||||||| || || || || ||| ||||||| || | ||||| ||
Sbjct 241605 CGGAGATAGTACATGCCAGTTTTCAGACCCAACTTCCAGCCAGCGAAGTGCATACTGGTG 241664
Query 117897 AACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATG-AA 117955
| |||| | || ||| | |||| | |||||| ||| ||||| || ||| ||
Sbjct 241665 ATCTTGCCCATTGTGGGATCCTTCATGTGAATGTTCATCGATTGTGATTGGTCAATGTAA 241724
Query 117956 GCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGA--TTTCCCACACAGTC 118013
|| || || || || ||||| | | | | ||| ||| ||||||| || |||
Sbjct 241725 GCA-CCACGGTCAGCGGCCATTTGGACGA--TGGTTCGCTGTGAGATTTCCCAAACGGTC 241781
Query 118014 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCC 118073
|||| || ||| |||||| ||||||| | ||| || || || |||||||| |
Sbjct 241782 TTGTAAAGAGCCTTGATATCAGCTGGGATGTTGGGGATGTTCTGAATCGATCCACCATC- 241840
Query 118074 TTGACCATGAGA---TCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCC 118130
| | |||| | | |||||| | | ||||||||||| || | |||||||
Sbjct 241841 --GGCAATGATACGGTTCTTCATGTTGTCAGACCAGAGACCCATGTCAACAAGATCCTTG 241898
Query 118131 ACGAG--ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATA 118187
| | ||| | |||| || ||||| || || || || | ||| |||||
Sbjct 241899 AGCAACCATGGGT--TGACGACTTGGAACTCGCCAGCAAGAACACGACG-AGAGTAGATG 241955
Query 118188 TTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCT-GTGGAGGCTGT 118246
|||| ||| ||||||||||||||||||||| | |||||| || | || ||| ||| ||
Sbjct 241956 TTGGACGTATATGGCTCAAAGCACTCATTG-AAGCCAAGAATTTGACTGGTGCTGGCAGT 242014
Query 118247 GGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAG 118306
||||| || || | || | ||| || || ||||| | || | | || | ||| |
Sbjct 242015 TGGCATAGGAGCGACAAGCAAGCTATTGCGAAGACCATGTTGCTTGATTTTCTGCTTCA- 242073
Query 118307 AGC-GTCCCAGTCGTAGTTGAGCTTT----GTCTCCCCCTGCCACATATCAAACTGGAGG 118361
||| |||||| || || || || | || | || |||||||||| |||| |
Sbjct 242074 AGCTGTCCCAATCCCAG-AGATCTGTTGGAGTAACACC---CCACATATCATACTGCAAC 242129
Query 118362 ATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAAT 118421
|| | ||| || || || ||||||||||||||||| | ||| ||||||| || |
Sbjct 242130 TCGCCCTTGGAGGCAGGAGAACCCTCAAATGTCTCATAAGTGCCATCAACCTTGGCAAGC 242189
Query 118422 TCGGAGCT--CGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTG 118479
|| | || || ||| || || || || || || || || || || || |
Sbjct 242190 TC--AACTGAAGCAGTGAGTGCGGCATGGTAGATGGTCTCGAAGATTTGAATGTTGAGGT 242247
Query 118480 CCTTGGCCTCGTCGGAATCAAACGCGAGTCG-GCACAAAATAAATACATCCGCGAGACCT 118538
||||||||| || || || | || || | || ||| |||| || |||||
Sbjct 242248 GCTTGGCCTCTGGAGAGTCGAATGGAAGACGAAGAGCCAAGAAA-GCATCAGCAAGACCC 242306
Query 118539 TGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTC-CGAGCGGTC-TCCACGG 118596
|||||||| | | | || || || || | | || |||| | | || || |
Sbjct 242307 TGGACACCAACGGCGATAGGTCGGTGGCGGAAGTT--GCTTCTCTTGGCTTCGGGAACAG 242364
Query 118597 GATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAAC--CTTTG-TGATTT 118653
| ||| | || ||| || | | | || | || | ||||||| ||| | || ||
Sbjct 242365 GGTAATAGTTGACATCAATGATCTTGTTCAAGTTCT---TGACAACGACTTGGCAGACTT 242421
Query 118654 CATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCA--TTGACATACTTAGGAAGGGC 118711
| ||||| | | | | ||| || ||| || | |||| | |||||| ||||||||||
Sbjct 242422 CGTGAAGTCTCTGGAAGTCATAAGTGC-CGT-TGTTCATGTCGACATAGGTAGGAAGGGC 242479
Query 118712 GATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGT 118771
| ||| |||| || || || | |||||| | || |||||| | ||| || ||
Sbjct 242480 AAGTGAAGCCAAGTTGCAGACGGCAACCTCATCTGGAGCACAGTACTCAACAATCTCAGT 242539
Query 118772 GCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGC 118831
||| | ||| || || ||||| || | ||||| || || |||| |||| || ||
Sbjct 242540 GCAGAGGTTCGAGCTTCGGATGGTACCGAGATTCTTCTGGTTGCTCTTTCTGTTGCAAGC 242599
Query 118832 ATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA 118891
|||||||||||||||| | || | || ||||| || || | || || || | | |||
Sbjct 242600 ATCCTTGTAAAGCATGAAGGGATTGCCAGTCTCGGTCTGAGCCTCCAGGATGGAGTACCA 242659
Query 118892 GA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCT---CTTC---CTCGTACTTTG 118944
|| | | || || | ||| ||| || |||| |||| ||| ||||
Sbjct 242660 GAGCTTTTGCGCCTTG----ATGGTCTTG---CGACCCTTACCTTCGCGCTCATACTGCT 242712
Query 118945 TGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGC 119004
|||||| || || || || || || | | || | | ||||| || || ||||
Sbjct 242713 CGTAGAGAGCCTCGAATTCATCGCCATAGACATCAGCCAAGCCTGGGCACTCATTGGGGC 242772
Query 119005 AGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGA 119064
| | | || ||| | ||| || ||||| ||||||||||| || || || ||||| |
Sbjct 242773 ACATCAAAGTCCACTCGCCATTCTTTTCAACTCGCTTCATGAAAAGATCAGGAATCCACA 242832
Query 119065 GCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCA 119124
| || |||||||||| ||| || | || || | || ||||| || | || |
Sbjct 242833 GGGCGTAGAAGAGATCACGAGCTCGGACCTCCTCCTTGCCGTGATTCTTTCGAAGATCAA 242892
Query 119125 AAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGAC 119184
| || | || ||| |||||||| || || || || | |||| | | ||| | |
Sbjct 242893 GGTACTCGAAGACATCGGCGTGCCATGGCTCAAGATAGATAGCGAAAG-CACCT--GGTC 242949
Query 119185 G------ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAA 119238
| |||| | |||| || || | |||||| ||| || || || ||||| || |
Sbjct 242950 GCTTGTTACCACCTTGGTCAACGTAACGAGCAGTGTTGTTGAAGACTCGGAGCATGGGGA 243009
Query 119239 TGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACT-TATTGGCTCTGACATCG 119297
||| || | || | |||||||| || ||| || || | || | || |||
Sbjct 243010 CGATGCCGTTCGAGTTACCATTTGTTCCTGCAAT-GTAGGCTCCGGTAGCGCGGA-TTCG 243067
Query 119298 -TGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACT 119356
|| | || | ||||| || || || ||| || || ||||| | | | |
Sbjct 243068 ATGAACGTTGAGGCCAATTCCACCAGCATTCTTGGAAATCATGGCGCAAGTCTTCAATGT 243127
Query 119357 GCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTG 119416
| ||||||| || ||||| ||| |||| | ||| ||||| || || | |||
Sbjct 243128 GTCGTAGATACCGTCGATACTGTCCTCCTTCATGTCGACAAGGAAACATGAAGAGAGTTG 243187
Query 119417 AGGCCTG-GGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAA-CATACCTTGG 119474
||| || || |||||||| |||||||||||| | || || |||| || | |||
Sbjct 243188 -GGCTTGTGGAGTACCAGCAGCGAAGAGAGTTGGGGAAGCATGCGTGAAGCACTTC-TGG 243245
Query 119475 GACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAG 119534
|||||| | ||| ||||| | | || || ||||| |||||||| |||| |
Sbjct 243246 GACATCAGATTGTATGTCTCAATCGCAGCCTCGATATCTTCACCGTGAATGCCGACTGCT 243305
Query 119535 ACCCGCATAAACATGTATTG-GGGTGTT 119561
|| ||||||| ||||| ||| ||| |||
Sbjct 243306 ACTCGCATAATCATGTGTTGTGGGCGTT 243333
>seq4
Length=1888314
Score = 158 bits (174), Expect = 1e-33
Identities = 346/512 (68%), Gaps = 6/512 (1%)
Strand=Plus/Plus
Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787
||||| ||||| |||||||| |||||||| ||||| || | | ||| |||||||||
Sbjct 1224147 TAGTCACCAACGCGCTTCTCAAAGAAGTTAGTCTTGCCAGCGAGCGAGATGTTCTCCATA 1224206
Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAAT-TGCTGGCACTCCAATCTGTTTGAGG-AGAC 129845
|| ||||||||||| || || | | | || || | | | || | ||||
Sbjct 1224207 AAGTCAAATGGGTTGGCAGACTTGTAGACCTTCT--CATTGCCGAGGGCAAGAAGCAGAC 1224264
Query 129846 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTAC 129905
|||| | |||| |||| ||||| | |||| | |||||||| || | ||| ||
Sbjct 1224265 GATCAGCGACGAACTCGATGTATTGCTTCATCAGATTCGAGTTCATGCCAAGGAGTGCAC 1224324
Query 129906 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGT 129965
| || || || || | |||| | | |||||| || |||||||| | || | | |
Sbjct 1224325 AAGGAAGAGCCTCAGTCAAGAACTCTTGCTCAATCTCGACAGCTTCGGTAATGACGTCTT 1224384
Query 129966 GAATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTT-GAAGAGTTCCACGGCAAACTCC 130024
| | | | | ||| || | | || |||| |||||| ||||| ||
Sbjct 1224385 GGACAGCTTGCTTGCTTGGGCGGT-GCTTCAAGTGAGAGAAGAGAAGGCAAGCAAAGTCG 1224443
Query 130025 TGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGA 130084
|||||||||||||||||| |||||||||||||| |||||| ||||| | ||| |||
Sbjct 1224444 GTGTGGAGACCCTCGTCACGAGAGATGAGTTCATTGGAGAAGGTAAGACCAGCCATAAGA 1224503
Query 130085 CCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACA 130144
|| ||||||||||||||||| || | || || ||| ||||||||| ||||| ||
Sbjct 1224504 CCACGCTTCTTCAACCAGAAGATGGACGCGAAGGAACCACTGAAGAAGATACCCTCGACG 1224563
Query 130145 CACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCAAACCACTTCATC 130204
||||| || | |||||| | |||||| | | ||| | || |||||| |
Sbjct 1224564 GCGGCGAATGCGACGAGACGTTGAGCAAATGTAGAGTTCTTGTCTTGAATCCACTTGACA 1224623
Query 130205 GCCCACTGCGCCTTTTTCTCGATACACGGGAC 130236
||||| | ||||| |||| |||||| || ||
Sbjct 1224624 GCCCAGTCGGCCTTCTTCTTGATACATGGAAC 1224655
>seq7
Length=1615722
Score = 89.7 bits (98), Expect = 6e-13
Identities = 216/322 (67%), Gaps = 10/322 (3%)
Strand=Plus/Minus
Query 14153 AAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCA--G 14210
|| ||||||||||||||||||| |||||||| || ||| | || || || || |
Sbjct 424186 AATCCATCCATCTCAGTCAAGATTTGATTGAGTGTAGCTTCTCTCTCGTCGTTACCACCG 424127
Query 14211 GCATACCACCCGCACTG----CGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACG 14266
| | | ||| || || || || | ||||| |||||||||||||| | |
Sbjct 424126 CCGAATGAGCCGGCCTTTCCACGGGCTTTGCCAATAGCGTCGATTTCATCGATGAAGATG 424067
Query 14267 ATACATGGTTGATTTTCACGGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGACA 14326
|||||||| ||| | | || | ||| | ||||||||||| ||||| |||
Sbjct 424066 ATACATGGAGTATTCTTTCTCGCCATAGAAAAAAGATCTCGCACTCGTGAAGCACCAACA 424007
Query 14327 CCCACAAACATCTCCACAAAATTGG--CGGCGGAACATTGGATGAAGGGGACGTTAGATT 14384
|| |||||||| ||||| || | || | | | ||| | || ||| || || | ||| |
Sbjct 424006 CCAACAAACATTTCCACGAACTCGGAACCACTG-ACACT-GAAGAACGGAACCTGAGACT 423949
Query 14385 CACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCTGGTTTCCCTGCGAGAAGGG 14444
| || || | ||| || | || ||||| || || ||||| || | |||| |
Sbjct 423948 CGCCAGCAGTAGCTTTCGCCAACAGCGTCTTACCAGTTCCTGGAGGTCCAGAAAGAATAG 423889
Query 14445 CACCACGTGGGATCCTGGCACC 14466
|||| ||||||||| |||||||
Sbjct 423888 CACCTCGTGGGATCTTGGCACC 423867
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618434651138760
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