Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016-
01-07] 71 sequences; 48,876,257 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq4 251 2e-61
seq16 127 6e-24
seq1 114 4e-20
seq26 111 5e-19
seq37 107 6e-18
seq42 84.2 7e-11
>seq4
Length=1888314
Score = 251 bits (278), Expect = 2e-61
Identities = 497/733 (68%), Gaps = 13/733 (2%)
Strand=Plus/Plus
Query 349197 CCGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATC 349256
|||| ||||| |||||| | || ||||| ||||| || |||| | | | | ||||||
Sbjct 923207 CCGCGATAGGTATCGATCTGGGAACTACCTATTCCTGCGTTGGTATCTTCCGCGATGATC 923266
Query 349257 GTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTA 349316
| | ||||| ||||| || || || || ||| |||| || || || | |||||| || |
Sbjct 923267 GAATCGAAATCATTGCCAACGACCAGGGAAACCGAACCACACCTTCCTTCGTTGCCTTCA 923326
Query 349317 CCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAA 349376
|||| ||||||||| |||| || ||| | || || || |||| || || || | |
Sbjct 923327 CCGACACTGAGCGTCTGATCGGAGATGCCGCCAAGAACCAAGTCGCCATGAACCCTCACA 923386
Query 349377 ATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGA--CAAATCTACACA 349434
|||| || || ||||| ||||| | || || | | || |||| | | | ||
Sbjct 923387 ATACAGTCTTCGATGCCAAGCGTTTGATCGGACGCAAGTTCGCTGATGCTGAGGTTCAGG 923446
Query 349435 ATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGAT---AAACCAAT 349491
||||| | || || || || || ||||| | ||| ||| || ||| |
Sbjct 923447 --CTGATATGAAGCACTTCCCATTCACTGTCATC------GACCGTGCCGGAAAGCCAGT 923498
Query 349492 TATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAAT 349551
||||| ||||| | || ||||| | || ||||| ||| || ||||| || || ||
Sbjct 923499 CATTGAAGTTGAGTTCAAGGGTGAGAAGAAGCAATTCACACCTGAGGAAATCTCTTCGAT 923558
Query 349552 GGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGC 349611
||| || || || ||| || | ||| || ||||| | |||| ||| || | | ||
Sbjct 923559 GGTCTTGGTCAAGATGCGTGAGACTGCGGAGGCATACCTTGGTGGAACTGTCAACAACGC 923618
Query 349612 TGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGG 349671
||| | ||||| |||||||| || | ||| | || ||| || ||||| ||||||||
Sbjct 923619 TGTCGTCACTGTCCCAGCCTACTTCACCGATTCACAACGTCAAGCCACAAAGGATGCTGG 923678
Query 349672 CAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGC 349731
|| || || | ||||| || ||||| || || ||||| || || || || |||||
Sbjct 923679 TCTGATCGCCGGTCTCAATGTCCTGAGAATCATCAACGAACCAACCGCAGCCGCCATTGC 923738
Query 349732 ATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGG 349791
||||| || || || | | ||| ||| ||| |||| || || ||| | |||||
Sbjct 923739 CTATGGTCTCGACAAGAAGGTTGAAGGTGAACGCAATGTTCTCATCTTCGATCTTGGTGG 923798
Query 349792 TGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAAC 349851
||| ||||| ||||| || || | || |||| ||||| || || || || || | ||
Sbjct 923799 TGGAACTTTCGATGTTTCCCTCTTGACCATTGAGGAGGGTATCTTCGAGGTCAAGTCCAC 923858
Query 349852 TGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGT 349911
||||||||| || || | ||||| || || || || || | || ||| || |||||
Sbjct 923859 TGCTGGTGACACTCACTTGGGTGGCGAGGACTTCGACAACAGACTTGTTAACCACTTTGT 923918
Query 349912 TAAAGAATTTAAG 349924
||| || || |||
Sbjct 923919 TAATGAGTTCAAG 923931
Score = 158 bits (174), Expect = 4e-33
Identities = 176/235 (75%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| ||||||||| || | | ||||| | ||||||||| ||||| |||||||| || |
Sbjct 716108 TTTGCATACCACCTCGGAGACGAAGAACCAAATGAAGAGTCGACTCCTTTTGAATGTTGT 716167
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
|||| || || || || || ||||||||||| || ||||| ||||| || | ||||| |
Sbjct 716168 AATCTGACAAAGTGCGGCCGTCTTCAAGTTGCTTACCAGCGAAGATAAGTCTCTGCTGGT 716227
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
| || || || || || ||||||||||| || | || ||||| || || | || || |
Sbjct 716228 CGGGTGGGATGCCCTCCTTATCCTGAATCTTGGACTTGACATTGTCGATGGTGTCCGAAG 716287
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|||||| || || || | |||||||| || | || || ||||| ||||||||
Sbjct 716288 ATTCAACCTCCAGAGTGATAGTCTTTCCAGTCAAAGTCTTAACAAAGATCTGCAT 716342
Score = 136 bits (150), Expect = 1e-26
Identities = 159/212 (75%), Gaps = 2/212 (1%)
Strand=Plus/Plus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| |||||| ||||| | | || || ||||| || |||||||| || ||||| ||||
Sbjct 716620 TTTGCATACCGCCACGAAGACGGAGGACGAGATGGAGGGTAGACTCCTTCTGAATGTTAT 716679
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
||||||| | || || || || ||||| || |||||||| ||||| | ||||| || |
Sbjct 716680 AATCAGAAAGGGTGCGACCGTCCTCAAGCTGCTTTCCAGCGAAGATCAAGCGTTGTTGGT 716739
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGAT 140681
| || || ||||| || || || ||||| || ||| || || ||||| || | ||| ||
Sbjct 716740 CGGGTGGGATTCCCTCCTTGTCTTGAATCTT-GCTCTTGACGTTATCGATGGTATCCGAG 716798
Query 140682 GGTTCAACTTCAAGTGTAACTGTCTTTCCGGT 140713
| ||||| ||||| || | |||||||||||
Sbjct 716799 GACTCAACCTCAAGAGTGATGGTCTTTCCGGT 716830
Score = 131 bits (144), Expect = 5e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570
|||||||| | | ||||| | ||| ||||| ||||| ||||| || || ||||||
Sbjct 715888 CCACCACGGAGACGGAGAACCAAATGGAGAGTCGACTCCTTTTGGATGTTGTAATCACTC 715947
Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGA 140630
| ||| |||||||| || | ||| || ||||||||||| | || ||||| || || ||
Sbjct 715948 AGTGTACGCCCATCCTCCAATTGCTTACCAGCAAAGATCAATCGCTGCTGGTCGGGTGGG 716007
Query 140631 ATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACT 140690
|| || || || || || || || | || ||||| ||||| | || || | || |||
Sbjct 716008 ATACCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCAATGGTGTCCGAAGACTCCACT 716067
Query 140691 TCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| | ||||| ||||||||||| | || || ||||| || |||||
Sbjct 716068 TCCAATGTAATGGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 716114
>seq16
Length=1327714
Score = 127 bits (140), Expect = 6e-24
Identities = 159/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570
|||||||| | | || || ||||||||||| ||||| || || || || ||||| ||
Sbjct 332080 CCACCACGGAGACGCAGGACGAGATGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGAG 332139
Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGA 140630
| || || ||||| || ||||| || ||||| ||||| || ||||| || || || |||
Sbjct 332140 AGAGTGCGGCCATCCTCGAGTTGCTTGCCAGCGAAGATCAGGCGTTGTTGGTCGGGTGGA 332199
Query 140631 ATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACT 140690
|||||||| || || || ||||| | || ||||| || || | ||| || | || ||
Sbjct 332200 ATTCCTTCCTTGTCTTGGATTTTGGACTTGACATTGTCGATGGTATCGGAAGACTCCACC 332259
Query 140691 TCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAA 140728
|| ||||| | ||||| || || || || || || ||
Sbjct 332260 TCGAGTGTGATAGTCTTGCCCGTGAGGGTCTTGACGAA 332297
>seq1
Length=2762476
Score = 114 bits (126), Expect = 4e-20
Identities = 221/326 (68%), Gaps = 0/326 (0%)
Strand=Plus/Minus
Query 378121 TCAAATCCATCATCTCCATATGAGAATTGAACAATTTTATCTTTATTGTTTCTTACAGTC 378180
|||| ||||| || ||||| |||||||||||| | | | ||||| || ||
Sbjct 1592307 TCAAGACCATCTTCACCATAGACGAATTGAACAATATCGCCAAGAGAATTTCTAACCGTG 1592248
Query 378181 ATATCATATCTAACCATTAAATCTTCTAATGCTTTAATAAGTCGTCGAGAAATATAACCA 378240
|| || | |||| | |||||| | || || | ||| || || || ||||||
Sbjct 1592247 CCGTCGTACTTCGCCATAACATCTTCGAGAGCCTTGACAAGACGACGTTGGATGTAACCA 1592188
Query 378241 GTTTGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATTGCATGGAAG 378300
|||| ||| || || ||||||||||| | ||| |||||||| ||||||||||||||
Sbjct 1592187 GTTTCGGCAGTCTTGACAGCAGTATCAATAAGACCTTCACGACCAGCCATTGCATGGAAG 1592128
Query 378301 AATAATTCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAATCCTCTTGCGCCT 378360
|| |||||||| || || | || | | | ||| |||||| || || | | |
Sbjct 1592127 AAGAATTCAGTCGGCGTCAAACCTCGGAGGTAAGAATTCTCAACGAAGCCACGCGATTCA 1592068
Query 378361 GGCGAATCATCATATTTTGTATAATGAGGTAATGTACGATTCTCAAACCCATATGGAATT 378420
|| |||| ||||| || || | || || | || |||| || ||| || | || ||
Sbjct 1592067 GGGGAATAATCATCCTTGGTGAAGTGGGGAAGAGTGCGATACTTAAAGCCGAAGGGGATG 1592008
Query 378421 CGTTTTCCATCAACATTCTGTTGACC 378446
|| ||||| ||||| |||||||||
Sbjct 1592007 CGCTTTCCCTCAACGGACTGTTGACC 1591982
>seq26
Length=969302
Score = 111 bits (122), Expect = 5e-19
Identities = 132/179 (74%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 140550 TTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATT 140609
||||| || |||||||| || | || || |||||||||||||| ||||| ||||||||
Sbjct 292270 TTTTGGATGTTATAATCGGAGAGGGTACGGCCATCTTCAAGTTGCTTTCCGGCAAAGATC 292211
Query 140610 AGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCA 140669
| ||| || || || || |||||||| || || ||||| || || | || ||||| ||
Sbjct 292210 AAACGCTGTTGGTCCGGTGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 292151
Query 140670 ATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAA 140728
|| | ||| || | || || ||||| || | ||||| || || || || || || ||
Sbjct 292150 ATAGTATCGGAGGACTCGACCTCAAGAGTGATGGTCTTGCCCGTAAGGGTCTTGACGAA 292092
>seq37
Length=479966
Score = 107 bits (118), Expect = 6e-18
Identities = 140/194 (72%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 140544 GACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCA 140603
||||| |||||||| || || || |||| || || | |||||||||||| || | ||||
Sbjct 404102 GACTCCTTTTGAATGTTGTAGTCGGATAGGGTGCGGCTATCTTCAAGTTGCTTACTAGCA 404161
Query 140604 AAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACA 140663
|| || || | ||||| || || || || || || ||||||||||| || | || ||
Sbjct 404162 AAAATAAGTCTCTGCTGGTCGGGTGGGATACCCTCCTTATCCTGAATCTTGGACTTGACG 404221
Query 140664 TTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTT 140723
|| || || | || || | |||||| || | || | |||||||| || | || ||
Sbjct 404222 TTGTCGATAGTGTCCGAAGATTCAACCTCCAAAGTGATAGTCTTTCCAGTCAAGGTCTTA 404281
Query 140724 ACAAAAATCTGCAT 140737
||||| || |||||
Sbjct 404282 ACAAAGATTTGCAT 404295
>seq42
Length=298824
Score = 84.2 bits (92), Expect = 7e-11
Identities = 75/94 (80%), Gaps = 0/94 (0%)
Strand=Plus/Plus
Query 202735 GTAAATGGTTCAAAACATTCATTATTACCTAAAATTTGACTGGTACTAGCAGTTGGCATA 202794
||| |||| ||||| || ||||| || | |||||||||||| || ||||||||||||
Sbjct 241962 GTATATGGCTCAAAGCACTCATTGAAGCCAAGAATTTGACTGGTGCTGGCAGTTGGCATA 242021
Query 202795 GGTGCAACTAGTAAACTATTGCGAAGCCCATATT 202828
|| || || || || ||||||||||| |||| ||
Sbjct 242022 GGAGCGACAAGCAAGCTATTGCGAAGACCATGTT 242055
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515253021592013
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