Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016-
01-07] 71 sequences; 48,876,257 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq42 275 7e-69
>seq42
Length=298824
Score = 275 bits (304), Expect = 7e-69
Identities = 1138/1764 (65%), Gaps = 67/1764 (4%)
Strand=Plus/Plus
Query 78190 GTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTC 78249
|| || | |||||||||||| || || |||||| |||||| || | |||||||||
Sbjct 241602 GTACGGAGATAGTACATGCCAGTTTTCAGACCCAACTTCCAGCCAGCGAAGTGCATACTG 241661
Query 78250 GACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATG 78309
| | |||| ||| | || | || |||| ||||| | ||| || || ||||| |||
Sbjct 241662 GTGATCTTGCCCATTGTGGGATCCTTCATGTGAATGTTCATCGATTGTGATTGGTCAATG 241721
Query 78310 TACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGTC 78369
|| ||||| ||||| || ||||| | || || | || | || ||||| | ||||
Sbjct 241722 TAAGCACCACGGTCAGCGGCCATTTGGACGATGGTTCGCTGTGAGATTTCCCAAACGGTC 241781
Query 78370 CGGTAAATGGCCTTCAGCTCTTCCTGGATGTCCAGC--GCT-TGTA-CGCTCC--CACCG 78423
||||| ||||| | || | |||||| | | | || | || ||| || ||
Sbjct 241782 TTGTAAAGAGCCTTGATATCAGCTGGGATGTTGGGGATGTTCTGAATCGATCCACCATCG 241841
Query 78424 GCTCGCACAATTTCATTCTTAAT-TTGAGGGTTCCAGCGATTGATCTTCTGAAGATCCCG 78482
|| | || ||||| || ||| | |||| || || | |||||||
Sbjct 241842 GCA---ATGATACGGTTCTTCATGTTGTCAGA-CCAGAGACCCATGTCAACAAGATCCTT 241897
Query 78483 GACCAGGTGCCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTT 78542
|| || |||| | | ||||||||| || || || || |||||||||
Sbjct 241898 GAGCAACCATGGGTTGACGACTTGGAACTCGCCAGCAAGAACACGACGAGAGTAGATGTT 241957
Query 78543 GGTCGTGTACGGCTCGAAAGC-CTCGTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCG 78601
|| ||| || ||||| ||||| ||| ||| || | || || ||| ||| || |
Sbjct 241958 GGACGTATATGGCTC-AAAGCACTCATTGAAGCCAAGAATTTGACTGGTGCTGGCAGTTG 242016
Query 78602 GCATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGACCTTTAGGC 78661
|||| || ||||| || | ||| ||||||||||| |||||| | ||| | ||
Sbjct 242017 GCATAGGAGCGACAAGCAAGCTATTGCGAAGACCATGTTGCTTGATTTTCTGCTTCAAGC 242076
Query 78662 CGTCCCAA------AATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAGGATACCCT 78715
||||||| | || | | | | |||||||| || || | ||||
Sbjct 242077 TGTCCCAATCCCAGAGATCTGTTGGAGTAACACCCCACATATCATACTGCAACTCGCCCT 242136
Query 78716 CGGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCATG 78775
||| || || || |||| || ||||| |||| || || ||||||| || || ||
Sbjct 242137 TGGAGGCAGGAGAACCCTCAAATGTCTCATAAGTGCCATCAACCTTGGCAAGCTCAACTG 242196
Query 78776 ACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCCT 78835
| | || || || ||||| | | ||||||||| ||||||| | ||||
Sbjct 242197 AAGCAGTGAGTGCGGCATGGTAGATGGTCTCGAAGATTTGAATGTTGAGGTGCTTGGCCT 242256
Query 78836 TGGTCTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACGCCGA 78895
| |||||| | ||| | || || ||| |||| || || |||||||| || |
Sbjct 242257 CTGGAGAGTCGAATGGAAGACGAAGAGCCAAGAAAGCATCAGCAAGACCCTGGACACCAA 242316
Query 78896 TAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTC---GGGTAAAAGT 78952
||||| ||||||||||| | |||||| | || | || |||| |||||| |||
Sbjct 242317 CGGCGATAGGTCGGTGGCGGAAGTTGCT-TCTCTTG--GCTTCGGGAACAGGGTAATAGT 242373
Query 78953 TCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACC-CGAGTCA--CCTCGTACAATT 79009
| ||| |||| ||||| ||| | |||| || | | || | |||| | |
Sbjct 242374 TGACATCAATGATCTTGTTCAAGTT---CTTGACAACGACTTGGCAGACTTCGTGAAGTC 242430
Query 79010 TGGCGAAATCAAAAT----GAT-TTCCTTT-GATGAAAGTCGGTAGGCACAGCGATGCCA 79063
| ||| ||| || | | ||| | | || | || || ||| || || ||||
Sbjct 242431 TCTGGAAGTCATAAGTGCCGTTGTTCATGTCGACATAGGTAGGAAGGGCAAGTGAAGCCA 242490
Query 79064 GGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAG 79123
|||||| ||||| ||| || || | | ||| | || || ||||| | || |
Sbjct 242491 AGTTGCAGACGGCAACCTCATCTGGAGCACAGTACTCAACAATCTCAGTGCAGAGGTTCG 242550
Query 79124 ACGACTT--GATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTA 79181
| ||| |||||| |||| ||||||||||||||||| ||| || || ||||||||
Sbjct 242551 AG--CTTCGGATGGTACCGAGATTCTTCTGGTTGCTCTTTCTGTTGCAAGCATCCTTGTA 242608
Query 79182 GCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCG 79241
|||| | || | || ||||| |||| || || | | || ||||| | |
Sbjct 242609 AAGCATGAAGGGATTGCCAGTCTCGGTCTGAGCCTCCAGGATGGAGTACCAGAGCTTTTG 242668
Query 79242 GGCCCGGACAACCTTCTTGTACCGACCCTGTGCGACGTACGTCCGGTACAACTCGTTGAA 79301
||| || ||||| ||||||| | || | || ||| ||||| ||
Sbjct 242669 CGCCTTGATGG---TCTTG---CGACCCTTACCTTCGCGC-TCA--TACTGCTCGTAGAG 242719
Query 79302 AGCCTCC---------CCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAG 79352
|||||| ||||||||||| | || ||| |||||||| | ||||||||||
Sbjct 242720 AGCCTCGAATTCATCGCCATAGACATCAGCCAAGCCTGGGCACTCATTGGGGCACATCAA 242779
Query 79353 GTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGT 79412
||| || | | ||| ||||| || |||||| || || || |||||||||||
Sbjct 242780 AGTCCACTCGCCATTCTTTTCAACTCGCTTCATGAAAAGATCAGGAATCCACAGGGCGTA 242839
Query 79413 GAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTC 79472
|||||| || || || | |||||| | ||| || ||| || || || || | ||
Sbjct 242840 GAAGAGATCACGAGCTCGGACCTCCTCCTTGCCGTGATTCTTTCGAAGATCAAGGTACTC 242899
Query 79473 CATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCC 79532
| || ||||||||||| ||||| |||||||| ||||| | ||| |||||| ||
Sbjct 242900 GAAGACATCGGCGTGCCATGGCTCAAGATAGATAGCGAAAGCACCTGGTCGCTTGTTACC 242959
Query 79533 GCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTC 79592
|| |||| ||||| || || ||||||||||| |||||||||||||| ||||||||||
Sbjct 242960 ACCTTGGTCAACGTAACGAGCAGTGTTGTTGAAGACTCGGAGCATGGGGACGATGCCGTT 243019
Query 79593 GGCGACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCA--GTGG 79650
| | || || || || || | ||| | || || | ||||| | || |
Sbjct 243020 CGAGTTACCATTTGTTCCTGCAATGTAGGCTCCGGTAGCGCGGA--TTCGATGAACGTTG 243077
Query 79651 ATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATG 79710
| || || || || | |||||| || ||||| ||| | || ||||||||
Sbjct 243078 AGGCCAATTCCACCAGCATTCTTGGAAATCATGGCGCAAGTCTTCAATGTGTCGTAGATA 243137
Query 79711 CCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGT-T 79769
|| ||||| ||| |||||||| |||| ||||| || || | || || ||||
Sbjct 243138 CCGTCGATACTGTCCTCCTTCATGTCGACAAGGAAACATGAAGAGAGTTG-GGCTTGTGG 243196
Query 79770 CGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATC 79829
||||| || |||||| || || | || ||||||||| |||| ||| ||||||||
Sbjct 243197 AGTACCAGCAGCGAAGAGAGTTGGGGAAGCATGCGTGAAGCACTTCTGGGACATCAGATT 243256
Query 79830 GTACGTCTCCTTGACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAA 79889
||| ||||| | | | || || || ||||| |||||||| || || ||||| |
Sbjct 243257 GTATGTCTCAATCGCAGCCTCGATATCTTCACCGTGAATGCCGACTGCTACTCGCATAAT 243316
Query 79890 GAGGTACTG-GGGCGTCTCGCCGA 79912
| || || |||||| |||| ||
Sbjct 243317 CATGTGTTGTGGGCGT-TCGCAGA 243339
Score = 214 bits (236), Expect = 2e-50
Identities = 1116/1743 (64%), Gaps = 75/1743 (4%)
Strand=Plus/Minus
Query 19118 ATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGA----GACATA 19173
|||||||| || |||||||| || || || || || ||| | |||| ||||||
Sbjct 243313 ATGCGAGTAGCAGTCGGCATTCACGGTGAAGATATC----GAGGCTGCGATTGAGACATA 243258
Query 19174 CGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTAC 19233
| | |||||| |||||||| ||||||||| || | || || || ||| || |||||
Sbjct 243257 CAATCTGATGTCCCAGAAGTGCTTCACGCATGCTTCCCCAACTCTCTTCGCTGCTGGTAC 243198
Query 19234 GA-ACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGG 19292
|||| || || | || |||||||| || | |||||||| ||||| || || |
Sbjct 243197 TCCACAAGCC-CAACTCTCTTCATGTTTCCTTGTCGACATGAAGGAGGACAGTATCGACG 243139
Query 19293 GCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGA 19352
| |||||||| || | ||| ||||| || |||||| | || || || ||
Sbjct 243138 GTATCTACGACACATTGAAGACTTGCGCCATGATTTCCAAGAATGCTGGTGGAATTGGCC 243079
Query 19353 TCCAC--TGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGC 19410
|| || | |||||| ||| | | || | || || || || || || |
Sbjct 243078 TCAACGTTCATCGAAT--CCGCGCTACCGGAGCCTACATTGCAGGAACAAATGG--TAAC 243023
Query 19411 -CGA-CGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAG 19468
||| ||| |||||||| |||||||| |||||||||||||| || | ||||| ||||
Sbjct 243022 TCGAACGGCATCGTCCCCATGCTCCGAGTCTTCAACAACACTGCTCGTTACGTTGACCAA 242963
Query 19469 GGGGGCGGCAAACG--CAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACG 19526
|| || ||| || || | ||| ||||| ||||| || |||||||||||||| || |
Sbjct 242962 GGTGGTAACAAGCGACCAGGTGCT--TTCGCTATCTATCTTGAGCCATGGCACGCCGATG 242905
Query 19527 TCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACC 19586
|| | || | ||| || || || ||| || || | |||||| | || ||| || |
Sbjct 242904 TCTTCGAGTACCTTGATCTTCGAAAGAATCACGGCAAGGAGGAGGTCCGAGCTCGTGATC 242845
Query 19587 TCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAAT 19646
||||| ||| |||||||||| || || |||||| || ||||| ||| | | || |
Sbjct 242844 TCTTCTACGCCCTGTGGATTCCTGATCTTTTCATGAAGCGAGTTGAAAAGAATGGCGAGT 242785
Query 19647 GGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTCA 19706
|| |||||||||| | || ||||| ||| | | || ||||| ||||| | |||
Sbjct 242784 GGACTTTGATGTGCCCCAATGAGTGCCCAGGCTTGGCTGATGTCTATGGCGATGAATTCG 242725
Query 19707 ATGAGTTGTACCGGACTTACGTAGCCC--AGGGCCGGTTCAAGAAGGTGGTCCGGGCCCG 19764
| | | ||| | || | ||| | ||| || || ||| || ||| |
Sbjct 242724 AGGCTCTCTACGAGCAGTATG-AGCGCGAAGGTAAGGGTC-GCAAGACCATCAAGGCGCA 242667
Query 19765 GGACGTCTGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGTGCTA 19824
| ||||| || | |||| | ||| |||||| |||| || | |||| ||
Sbjct 242666 AAAGCTCTGGTACTCCATCCTGGAGGCTCAGACCGAGACTGGCAATCCCTTCATGCTTTA 242607
Query 19825 CAAGGACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATC--AAGTCGTCC 19882
|||||| || ||| ||| || |||||||| |||| | ||| ||| ||
Sbjct 242606 CAAGGATGCTTGCAACAGAAAGAGCAACCAGAAGAATCTCGGTACCATCCGAAG--CTCG 242549
Query 19883 AACCTGTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATCTG 19942
||||| || ||||| || | ||| | || || ||| |||||| || || ||
Sbjct 242548 AACCTCTGCACTGAGATTGTTGAGTACTGTGCTCCAGATGAGGTTGCCGTCTGCAACTTG 242489
Query 19943 GCGTCCCTGTGCCTGCCGAC---TTTCG---TCAAGGCCTCCTCCTTCGACTTTGCCAAA 19996
|| || || ||| || || | ||| | || | | | | ||||| | |
Sbjct 242488 GCTTCACTTGCCCTTCCTACCTATGTCGACATGAACAACGGCACTTATGACTTCCAGAGA 242429
Query 19997 TTGTACGAGGTGACCCGGGTC---GTCACGCGTAATCTGAATCGCGTCATCGATCGGAAC 20053
| |||| || || ||| |||| | || |||| |||| ||| |||
Sbjct 242428 CTTCACGAAGTCTGCCAAGTCGTTGTCAAG---AACTTGAACAAGATCATTGATGTCAAC 242372
Query 20054 TTTTACCC---GACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATC 20110
| |||||| |||| || | | ||| || | |||||||| || ||||| |
Sbjct 242371 TATTACCCTGTTCCCGAAGCCAAGAG-AAG--CAACTTCCGCCACCGACCTATCGCCGTT 242315
Query 20111 GGCGTCCAGGGCCTGGCCGACGTTTTCATGATGCTCGGCCTCT--CATTCGACGATCCCA 20168
|| |||||||| || || || | |||| || |||| | ||| |||||||| |||
Sbjct 242314 GGTGTCCAGGGTCTTGCTGATGCTTTCTTG--GCTCTTCGTCTTCCATTCGACTCTCCAG 242257
Query 20169 AGGCGCGCGAGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAAT 20228
|||| | ||||||| ||||||||| || | ||||| || || ||| | |
Sbjct 242256 AGGCCAAGCACCTCAACATTCAAATCTTCGAGACCATCTACCATGCCGCACTCACTGCTT 242197
Query 20229 CGTGCGAACTCGCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGTCCG 20288
| || || ||||| | || ||| | || ||||| || |||| || || || |||
Sbjct 242196 CAGTTGAGCTTGCCAAGGTTGATGGCACTTATGAGACATTTGAGGGTTCTCCTGCCTCCA 242137
Query 20289 AGGGTATCCTCCAGCCGGACATGTGGGGCGTCACT----GAGA---ATGAGTTTTGGAGC 20341
|||| | ||| || |||||||| || ||| ||| || | || ||| |
Sbjct 242136 AGGGCGAGTTGCAGTATGATATGTGGGGTGTTACTCCAACAGATCTCTGGGATTGGGA-C 242078
Query 20342 GCCCTCAAGGTTGAGATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATG 20401
| | ||| | |||||| || || |||||||| ||||| ||||| || |||
Sbjct 242077 AGCTTGAAGCAGAAAATCAAGCAACATGGTCTTCGCAATAGCTTGCTTGTCGCTCCTATG 242018
Query 20402 CCGACCGCCTCGACCGCCCAGATCATGGGGAACAACGAG-GCTTTCGAGCCGTACACGAC 20460
|| || ||| ||| || || | || ||| ||| ||||| ||||| || ||| |
Sbjct 242017 CCAACTGCCAGCACCAGTCAAATTCTTGGCTTCAATGAGTGCTTT-GAGCCATATACGTC 241959
Query 20461 CAACATCTACTTGCGTCGTACACTGGCCGGTGAGTTCGTCATGGTAAACAAGCACCTGGT 20520
||||||||||| |||||| || || || |||||| | || ||| || |
Sbjct 241958 CAACATCTACTCTCGTCGTGTTCTTGCTGGCGAGTTCCAAGTCGTCAACCCATGGTTGCT 241899
Query 20521 CCGCGA-CTTGCAGAAGATCGATATGTGGTCGCCCAAAATTAAGAA---TGAAATTGTCC 20576
| || |||| | | || | | | ||||| ||| || ||||| | |||| ||
Sbjct 241898 CAAGGATCTTGTTG-ACATGGGTCTCTGGTCTGACAACATGAAGAACCGTATCATTG-CC 241841
Query 20577 GAGCCGGCGGGAGCG-TCCAG-GCAT--TGGATATCCCCCAGAACCTCAAGGACATTTAC 20632
|| | ||| || | ||| ||| | ||||| | |||||| |||||
Sbjct 241840 GA---TGGTGGATCGATTCAGAACATCCCCAACATCCCAGCTGATATCAAGGCTCTTTAC 241784
Query 20633 AGGACCGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCGGCCGATCGCGGCGCC 20692
| |||||| ||||||||| ||||| | |||| || | ||||| || || || || ||
Sbjct 241783 AAGACCGTTTGGGAAATCTCACAGCGAACCATCGTCCAAATGGCCGCTGACCGTGGTGCT 241724
Query 20693 TACATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCGAGCCTGGCGAAGCTG 20752
||||| ||||| || || ||| | || | |||| || |||| | ||| ||| |
Sbjct 241723 TACATTGACCAATCACAATCGATGAACATTCACATGAAGGATCCCACAATGGGCAAGATC 241664
Query 20753 AGCTCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGCATGTACTATCTGCGG 20812
| | ||||| | |||||| | ||| || || || |||||||||||||| ||
Sbjct 241663 ACCAGTATGCACTTCGCTGGCTGGAAGTTGGGTCTGAAAACTGGCATGTACTATCTCCGT 241604
Query 20813 ACC 20815
|||
Sbjct 241603 ACC 241601
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548524313184240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |