Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016-
01-07] 71 sequences; 48,876,257 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq42 179 4e-40
seq12 122 1e-22
seq4 109 6e-19
>seq42
Length=298824
Score = 179 bits (198), Expect = 4e-40
Identities = 505/764 (66%), Gaps = 30/764 (4%)
Strand=Plus/Minus
Query 53195 ATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCG--TGAGACGTACG 53252
||||| || || | || || |||||||| || || || | | || |||||| |||
Sbjct 243313 ATGCGAGTAGCAGTCGGCATTCACGGTGAAGA-TAT-CGAGGCTGCGATTGAGACATACA 243256
Query 53253 ACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA 53312
| | ||| ||| |||| ||| ||||| || | ||||| || ||| ||||||||
Sbjct 243255 ATCTGATGTCCCAGAAGTGCTTCACGCATGCTTCCCCAACTCTCTTCGCTGCTGGTACTC 243196
Query 53313 ATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCA 53372
|| | || | || || ||||| || | |||||||| ||| |||||||| |
Sbjct 243195 CACAAGCCCAACTCTCTTCATGTTTCCTTGTCGACATGAAGGAGGACAGTATCGACGGTA 243136
Query 53373 TCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCC 53432
||||||| || | ||| || ||| || |||||| | ||||| || || ||
Sbjct 243135 TCTACGACACATTGAAGACTTGCGCCATGATTTCCAAGAATGCTGGTGGAATTGGCCTCA 243076
Query 53433 AC--TGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGA 53490
|| | ||||| |||| || | ||| | || || || || || | | |
Sbjct 243075 ACGTTCATCGAA--TCCGCGCTACCGGAGCCTACATTGCAGGAACAAATGGTAACTCGAA 243018
Query 53491 TGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGG 53550
|| ||||| || |||||||| |||||||||||||| || || ||||| |||| |||||
Sbjct 243017 CGGCATCGTCCCCATGCTCCGAGTCTTCAACAACACTGCTCGTTACGTTGACCAAGGTGG 242958
Query 53551 TGGGAAGCG-CAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGG 53609
| ||||| | ||| | | ||||| ||||| || ||||| ||||||||||| | | |
Sbjct 242957 TAACAAGCGACCAGGTG-CTTTCGCTATCTATCTTGAGCCATGGCACGCCGATGTCTTCG 242899
Query 53610 AGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT-T 53668
||| || || || || |||||| || | || ||| | || ||||| || || |
Sbjct 242898 AGTACCTTGATCTTCGAAAGAATCACGGCAAGGAGGAGGTCCGAGCTCGTGATCTCTTCT 242839
Query 53669 ACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTAC 53728
|| || ||||||||||| || || |||||| | || || ||| | | ||||||
Sbjct 242838 AC-GCCCTGTGGATTCCTGATCTTTTCATGAAGCGAGTTGAAAAGAATGGCGAGTGGACT 242780
Query 53729 CTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGT-------- 53780
|||||||||| || |||||||| ||| | | |||||| || || || |
Sbjct 242779 TTGATGTGCCCCAATGAGTGCCCAGGCTTGGCTGATGTCTATGGCGATGAATTCGAGGCT 242720
Query 53781 -TTAACGAGATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCG 53839
| ||||| |||| || | || || | |||| ||| |||| ||||||||
Sbjct 242719 CTCTACGAGCAGTAT--GA-GCGCGAAGGTAAGGGTCGC------AAGACCATCAAGGCG 242669
Query 53840 CGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGC 53899
| || | ||| | | ||||| || ||| ||||| || | || | ||||
Sbjct 242668 CAAAAGCTCTGGTACTCCATCCTGGAGGCTCAGACCGAGACTGGCAATCCCTTCATGCTT 242609
Query 53900 TACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGG 53943
||||||||| | |||| ||||||||||||||||| ||||
Sbjct 242608 TACAAGGATGCTTGCAACAGAAAGAGCAACCAGAAGAATCTCGG 242565
Score = 82.4 bits (90), Expect = 8e-11
Identities = 101/138 (73%), Gaps = 0/138 (0%)
Strand=Plus/Minus
Query 55787 GCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCT 55846
||||| |||||||| ||||| ||||| || || || ||||||| |||| || ||||
Sbjct 241738 GCTGACCGTGGTGCTTACATTGACCAATCACAATCGATGAACATTCACATGAAGGATCCC 241679
Query 55847 TCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGT 55906
|| ||| |||| | | | |||||||| || |||||| ||| || || || ||
Sbjct 241678 ACAATGGGCAAGATCACCAGTATGCACTTCGCTGGCTGGAAGTTGGGTCTGAAAACTGGC 241619
Query 55907 ATGTACTATCTGCGGACC 55924
||||||||||| || |||
Sbjct 241618 ATGTACTATCTCCGTACC 241601
>seq12
Length=1482706
Score = 122 bits (134), Expect = 1e-22
Identities = 201/285 (71%), Gaps = 14/285 (5%)
Strand=Plus/Plus
Query 117293 GGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGC 117352
|||| || | |||||| || ||||||| ||| |||||||| | || |||||||| |
Sbjct 867253 GGTGAAAGTCTAGTGAAGATATAACGAGGGCTAGCAGCATCGCTACCTCCAGCAAGTCTG 867312
Query 117353 GTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGA 117412
||||||| | ||| || || |||||| ||| | |||||| | ||| ||||| ||||||
Sbjct 867313 CTACCGAAATTTCCGCTGGGTTCCAAGCAGTTGACGTTGTTTGAGCCAACAAAATTTTGA 867372
Query 117413 GCCAAGT----TGACAATCGTAC-CTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCT 117467
|| ||| ||| | || || | | || ||| ||||| || || || || || |
Sbjct 867373 GC-AAGACCAATGATAGTCATATGCATAGAAGCT----TCACCGTGATGGTAGGCGGTAT 867427
Query 117468 GCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATGTCTGACG--TCAGGTTCTTCTT 117525
|||| | ||||| || |||| | | ||||||||||||| ||| || || |||
Sbjct 867428 TCTCCCCAACGTAACCGGCCAATTCAACCACCTTCATGTC--ACGGACAAGATTACGCTT 867485
Query 117526 GAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCAGACCATC 117570
|| ||| ||| | || ||||| | ||| | ||||| | ||||||
Sbjct 867486 GAAGCAAGCAAACATGACCTTTCTCTGTCCAGGCTTGAAACCATC 867530
>seq4
Length=1888314
Score = 109 bits (120), Expect = 6e-19
Identities = 96/120 (80%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 74789 TTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACA 74848
|||||| || || | ||| |||| |||||| ||||||||||||||||| |||||||
Sbjct 1224473 TTCATTGGAGAAGGTAAGACCAGCCATAAGACCACGCTTCTTCAACCAGAAGATGGACGC 1224532
Query 74849 GAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAA 74908
||||||||||||||||||||| || ||||| || || ||||| || ||||| || ||
Sbjct 1224533 GAAGGAACCACTGAAGAAGATACCCTCGACGGCGGCGAATGCGACGAGACGTTGAGCAAA 1224592
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547215514345800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |