Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016-
01-07] 71 sequences; 48,876,257 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq42 316 3e-81
>seq42
Length=298824
Score = 316 bits (350), Expect = 3e-81
Identities = 1328/2063 (64%), Gaps = 45/2063 (2%)
Strand=Plus/Plus
Query 76782 GTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 76841
|||||||| || |||| || || | | ||||| ||||||||||| |||||||| |||
Sbjct 241572 GTAAACTGGATAGGAGCTGAAGCAGCCATGGTACGGAGATAGTACATGCCAGTTTTCAGA 241631
Query 76842 CCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATA 76901
|||| |||| || ||| ||||| || || | ||| | ||||| ||
Sbjct 241632 CCCAACTTCCAGCCAGCGAAGTGCATACTGGTGATCTTGCCCATTGTGGGATCCTTCATG 241691
Query 76902 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 76961
||||| |||||||| || ||| || ||| |||| || | ||||| ||||||| |
Sbjct 241692 TGAATGTTCATCGATTGTGATTGGTCAATGTAAGCACCACGGTCAGCGGCCATTTGGACG 241751
Query 76962 ATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGG 77021
||||| || | |||||||||| || ||| ||| ||||||||| |||| | |
Sbjct 241752 ATGGTTCGCTGTGAGATTTCCCAAACGGTCTTGTAAAGAGCCTTGATATCAGCTGGGATG 241811
Query 77022 TTTG---TATTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCATCATTC 77078
|| | | || ||||| || |||||||| | || || ||||| || | ||| |
Sbjct 241812 TTGGGGATGTTCTGAATCGATCCACCATCGGCAATGATACGGTTCTTCATGTTGTCAGAC 241871
Query 77079 CACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCCA 77138
|| | | | || | | | | || | || || || | ||| || || |||
Sbjct 241872 CAGAGACCCATGTCAACAAGATCCTTGAGCAACCATGGGTTGACGACTTGGAACTCGCCA 241931
Query 77139 GACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCC 77198
| | || | ||||| ||| || || |||||||| || | | |||||| ||
Sbjct 241932 GCAAGAACACGACGAGAGTAGATGTTGGACGTATATGGCTCAAAGCACTCATTGAAGCCA 241991
Query 77199 AAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCA 77258
| ||||||| || |||||||||||||| || || | || ||||| | ||||||
Sbjct 241992 AGAATTTGACTGGTGCTGGCAGTTGGCATAGGAGCGACAAGCAAGCTATTGCGAAGACCA 242051
Query 77259 TGTGTTCTGATTTTAT-CTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACATC 77317
||| ||||||| | ||| || | | ||||||||| ||||||| || |||| |
Sbjct 242052 TGTTGCTTGATTTTCTGCTTCAAGCTGTC-CCAATCCCAGAGATCTGTTGGAGTAACACC 242110
Query 77318 CCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATATGTTTCATAAGG 77377
||| | ||| || || | || || ||| || || | | |||| |||||||
Sbjct 242111 CCACATATCATACTGCAACTCGCCCTTGGAGGCAGGAGAACCCTCAAATGTCTCATAAGT 242170
Query 77378 TCCTTCTGTTTCAGCTAGTTCACAACTC--GCTTCCAATGCTCCGTAATAAATTGTTTCG 77435
|| || | || || ||| ||| || | ||| | | || || || |||
Sbjct 242171 GCCATCAACCTTGGCAAGCTCA--ACTGAAGCAGTGAGTGCGGCATGGTAGATGGTCTCG 242228
Query 77436 AAAATCTTCTTATTGAGAT-CTTGTGCTTCAATACTATCAAACGGATAATGTAAAAG--A 77492
|| || | | ||||| | |||| || || | || || ||| | | || || |
Sbjct 242229 AAGATTTGAATGTTGAGGTGCTTG-GCCTCTGGAGAGTCGAATGGAAGACG-AAGAGCCA 242286
Query 77493 ATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAA 77552
| |||| |||| || | ||||| || |||| | ||||||| || | |||
Sbjct 242287 AGAAAG-CATCAGCAAGACCCTGGACACCAACGGCGATAGGTCGGTGGCGGAAGTTGCTT 242345
Query 77553 ATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTCTAACA 77612
| || ||||| |||| ||| ||||| || | || || || || || | || | |||
Sbjct 242346 CTCTTGGCTTCGGGAACAGGGTAATAGTTGACATCAATGATCTTGTTCAAGTTCTTGACA 242405
Query 77613 ACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCCATCTATAACAA--ACA 77670
|| |||| || || | ||| | | || ||| | | || | | | |||
Sbjct 242406 ACGACTTGGCAGACTTCGTGAAGTCTCTGGAAGTCATAAGTGCCGTTGTTCATGTCGACA 242465
Query 77671 T--GTTCAAAG--CTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCA-TA 77725
| || ||| | | || || | || || || || ||||||| | | || ||
Sbjct 242466 TAGGTAGGAAGGGCAAGTGAAGCCAAGTTGCAGACGGCAACCTCATCTG-GAGCACAGTA 242524
Query 77726 TTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCT 77785
| | ||||| || || || || | | ||| || || ||||| | ||||||||
Sbjct 242525 CTCAACAATCTCAGTGCAGAGGTTCGAGCTTCGGATGGTACCGAGATTCTTCTGGTTGCT 242584
Query 77786 CTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTC 77845
|||| | ||||| | ||||| ||||| || || ||| | || || || |||| | ||
Sbjct 242585 CTTTCTGTTGCAAGCATCCTTGTAAAGCATGAAGGGATTGCCAGTCTCGGTCTGAGCCTC 242644
Query 77846 GATAATAGATTTCCAGACGACTCTAGCTTTTATCATAGATTTGTATCGCCTCTCT---CT 77902
| || || | ||||| || | || | | || | ||| | | | || |
Sbjct 242645 CAGGATGGAGTACCAGAG--CTTTTGCGCCT-TGATGGTCTTGCGACCCTTACCTTCGCG 242701
Query 77903 TTCATATTGA--GTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGG 77960
||||| || ||| | |||| || |||||||| || | |||||| |||| || |||
Sbjct 242702 CTCATACTGCTCGTAGAGAGCC--TCGAATTCATCGCCATAGACATCAGCCAAGCCTGGG 242759
Query 77961 CATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGA 78020
|| ||||| ||||||||||| | ||| || |||| | | |||||| ||||| || |||
Sbjct 242760 CACTCATTGGGGCACATCAAAGTCCACTCGCCATTCTTTTCAACTCGCTTCATGAAAAGA 242819
Query 78021 TCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTC 78080
||||| ||||| || || || ||||| || | || || || || || ||||
Sbjct 242820 TCAGGAATCCACAGGGCGTAGAAGAGATCACGAGCTCGGACCTCCTCCTTGCCGTGATTC 242879
Query 78081 TTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATA 78140
||| |||||| || |||| | | ||| | |||||||| || ||||| || || | |
Sbjct 242880 TTTCGAAGATCAAGGTACTCGAAGACATCGGCGTGCCATGGCTCAAGATAGATAGCGAAA 242939
Query 78141 ACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTC 78200
| || ||||| || ||||| || || || | || | || ||||| || | ||||
Sbjct 242940 GCACCTGGTCGCTTGTTACCACCTTGGTCAACGTAACGAGCAGTGTTGTTGAAGACTCGG 242999
Query 78201 AACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCG 78260
| ||| || | || ||||| || | ||||||||||| | ||| || ||| | |||
Sbjct 243000 AGCATGGGGACGATGCCGTTCGAGTTACCATTTGTTCCTGCAATGTAGGCTCCGGTAGCG 243059
Query 78261 CGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGT 78320
|| || | || | | || ||||| || || |||| || || | ||||||
Sbjct 243060 CGGATTCGATGAACGTTGAGGCCAATTCCACCAGCATTCTTGGAAATCATGGCGCAAGTC 243119
Query 78321 TTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTA 78380
|||||||| ||||||||||| || |||||||| ||| |||||| | ||| ||||| |
Sbjct 243120 TTCAATGTGTCGTAGATACCGTCGATACTGTCCTCCTTCATGTCGACAAGGAAACATGAA 243179
Query 78381 GACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCAT 78440
|| | ||| || ||| || ||| || | || || || |||||||| || ||
Sbjct 243180 GAGAGTTGGGCTTGTGGAGTACCAGCAGCGAAGAGAGTTGGGGAAGCATGCGTGAAGCAC 243239
Query 78441 TTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTC-CCATTGATGAATTCC 78499
|| | || | ||||||||||| ||||| || | || || || || | ||||| ||
Sbjct 243240 TTCTGGGACATCAGATTGTATGTCTCAATCGCAGCCTCGATATCTTCACCG-TGAATGCC 243298
Query 78500 TACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAA 78559
|| ||||| ||||| | ||| || || || | ||| |||| ||| | |
Sbjct 243299 GACTGCTACTCGCATAATCATGTGTTGTGGGCGTTCGCAGATCTTGCCATTGAGGCGGAG 243358
Query 78560 CAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCTCTCG 78617
| ||||||| || | ||| || || ||||| || | ||| ||||| |||| |||
Sbjct 243359 GAGGTATGATCGCTCGAGAGTCTTGAAGCCAAAGTATTGGTAATTGAAA--TCTCGGTCG 243416
Query 78618 TAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGTAACA-ATATCCATG-ACAGTAG 78675
|| | |||| | ||||| |||| | | || ||| ||||| | | ||| | |
Sbjct 243417 TAGACAATAGCGGAATTAAGTTCTGCCTCGTGCTTGATAACACACTTGTATGTGGCCTCG 243476
Query 78676 TTGAAATAATAGGAGATCGTACACCATTTTTAGGATTAACATAGTTAAATAAATCTTCCA 78735
|| || |||||||| | ||||| |||||| || ||||| | | ||| |
Sbjct 243477 CTG--ATCATAGGAGAAAGCTTGCCATTCCGAGGATTGACGTAGTTGTAGAGGTCTGATA 243534
Query 78736 TTACA-TCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCA 78794
| ||| || || | | || || || | |||||| || || || || || |||| ||||
Sbjct 243535 TCACAGTCGAGAACT-GCTTCTTGGTCTGCTTGTGGAGGTTGGAGACTGCAATTCGTGCA 243593
Query 78795 GCTAGAATAGCATAATCAGGATG 78817
|| || || ||||| || |||||
Sbjct 243594 GCGAGGATGGCATAGTCGGGATG 243616
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694668183481440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |