Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016- 01-07] 71 sequences; 48,876,257 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq42 316 3e-81 >seq42 Length=298824 Score = 316 bits (350), Expect = 3e-81 Identities = 1328/2063 (64%), Gaps = 45/2063 (2%) Strand=Plus/Plus Query 76782 GTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 76841 |||||||| || |||| || || | | ||||| ||||||||||| |||||||| ||| Sbjct 241572 GTAAACTGGATAGGAGCTGAAGCAGCCATGGTACGGAGATAGTACATGCCAGTTTTCAGA 241631 Query 76842 CCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATA 76901 |||| |||| || ||| ||||| || || | ||| | ||||| || Sbjct 241632 CCCAACTTCCAGCCAGCGAAGTGCATACTGGTGATCTTGCCCATTGTGGGATCCTTCATG 241691 Query 76902 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 76961 ||||| |||||||| || ||| || ||| |||| || | ||||| ||||||| | Sbjct 241692 TGAATGTTCATCGATTGTGATTGGTCAATGTAAGCACCACGGTCAGCGGCCATTTGGACG 241751 Query 76962 ATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGG 77021 ||||| || | |||||||||| || ||| ||| ||||||||| |||| | | Sbjct 241752 ATGGTTCGCTGTGAGATTTCCCAAACGGTCTTGTAAAGAGCCTTGATATCAGCTGGGATG 241811 Query 77022 TTTG---TATTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCATCATTC 77078 || | | || ||||| || |||||||| | || || ||||| || | ||| | Sbjct 241812 TTGGGGATGTTCTGAATCGATCCACCATCGGCAATGATACGGTTCTTCATGTTGTCAGAC 241871 Query 77079 CACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCCA 77138 || | | | || | | | | || | || || || | ||| || || ||| Sbjct 241872 CAGAGACCCATGTCAACAAGATCCTTGAGCAACCATGGGTTGACGACTTGGAACTCGCCA 241931 Query 77139 GACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCC 77198 | | || | ||||| ||| || || |||||||| || | | |||||| || Sbjct 241932 GCAAGAACACGACGAGAGTAGATGTTGGACGTATATGGCTCAAAGCACTCATTGAAGCCA 241991 Query 77199 AAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCA 77258 | ||||||| || |||||||||||||| || || | || ||||| | |||||| Sbjct 241992 AGAATTTGACTGGTGCTGGCAGTTGGCATAGGAGCGACAAGCAAGCTATTGCGAAGACCA 242051 Query 77259 TGTGTTCTGATTTTAT-CTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACATC 77317 ||| ||||||| | ||| || | | ||||||||| ||||||| || |||| | Sbjct 242052 TGTTGCTTGATTTTCTGCTTCAAGCTGTC-CCAATCCCAGAGATCTGTTGGAGTAACACC 242110 Query 77318 CCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATATGTTTCATAAGG 77377 ||| | ||| || || | || || ||| || || | | |||| ||||||| Sbjct 242111 CCACATATCATACTGCAACTCGCCCTTGGAGGCAGGAGAACCCTCAAATGTCTCATAAGT 242170 Query 77378 TCCTTCTGTTTCAGCTAGTTCACAACTC--GCTTCCAATGCTCCGTAATAAATTGTTTCG 77435 || || | || || ||| ||| || | ||| | | || || || ||| Sbjct 242171 GCCATCAACCTTGGCAAGCTCA--ACTGAAGCAGTGAGTGCGGCATGGTAGATGGTCTCG 242228 Query 77436 AAAATCTTCTTATTGAGAT-CTTGTGCTTCAATACTATCAAACGGATAATGTAAAAG--A 77492 || || | | ||||| | |||| || || | || || ||| | | || || | Sbjct 242229 AAGATTTGAATGTTGAGGTGCTTG-GCCTCTGGAGAGTCGAATGGAAGACG-AAGAGCCA 242286 Query 77493 ATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAA 77552 | |||| |||| || | ||||| || |||| | ||||||| || | ||| Sbjct 242287 AGAAAG-CATCAGCAAGACCCTGGACACCAACGGCGATAGGTCGGTGGCGGAAGTTGCTT 242345 Query 77553 ATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTCTAACA 77612 | || ||||| |||| ||| ||||| || | || || || || || | || | ||| Sbjct 242346 CTCTTGGCTTCGGGAACAGGGTAATAGTTGACATCAATGATCTTGTTCAAGTTCTTGACA 242405 Query 77613 ACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCCATCTATAACAA--ACA 77670 || |||| || || | ||| | | || ||| | | || | | | ||| Sbjct 242406 ACGACTTGGCAGACTTCGTGAAGTCTCTGGAAGTCATAAGTGCCGTTGTTCATGTCGACA 242465 Query 77671 T--GTTCAAAG--CTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCA-TA 77725 | || ||| | | || || | || || || || ||||||| | | || || Sbjct 242466 TAGGTAGGAAGGGCAAGTGAAGCCAAGTTGCAGACGGCAACCTCATCTG-GAGCACAGTA 242524 Query 77726 TTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCT 77785 | | ||||| || || || || | | ||| || || ||||| | |||||||| Sbjct 242525 CTCAACAATCTCAGTGCAGAGGTTCGAGCTTCGGATGGTACCGAGATTCTTCTGGTTGCT 242584 Query 77786 CTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTC 77845 |||| | ||||| | ||||| ||||| || || ||| | || || || |||| | || Sbjct 242585 CTTTCTGTTGCAAGCATCCTTGTAAAGCATGAAGGGATTGCCAGTCTCGGTCTGAGCCTC 242644 Query 77846 GATAATAGATTTCCAGACGACTCTAGCTTTTATCATAGATTTGTATCGCCTCTCT---CT 77902 | || || | ||||| || | || | | || | ||| | | | || | Sbjct 242645 CAGGATGGAGTACCAGAG--CTTTTGCGCCT-TGATGGTCTTGCGACCCTTACCTTCGCG 242701 Query 77903 TTCATATTGA--GTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGG 77960 ||||| || ||| | |||| || |||||||| || | |||||| |||| || ||| Sbjct 242702 CTCATACTGCTCGTAGAGAGCC--TCGAATTCATCGCCATAGACATCAGCCAAGCCTGGG 242759 Query 77961 CATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGA 78020 || ||||| ||||||||||| | ||| || |||| | | |||||| ||||| || ||| Sbjct 242760 CACTCATTGGGGCACATCAAAGTCCACTCGCCATTCTTTTCAACTCGCTTCATGAAAAGA 242819 Query 78021 TCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTC 78080 ||||| ||||| || || || ||||| || | || || || || || |||| Sbjct 242820 TCAGGAATCCACAGGGCGTAGAAGAGATCACGAGCTCGGACCTCCTCCTTGCCGTGATTC 242879 Query 78081 TTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATA 78140 ||| |||||| || |||| | | ||| | |||||||| || ||||| || || | | Sbjct 242880 TTTCGAAGATCAAGGTACTCGAAGACATCGGCGTGCCATGGCTCAAGATAGATAGCGAAA 242939 Query 78141 ACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTC 78200 | || ||||| || ||||| || || || | || | || ||||| || | |||| Sbjct 242940 GCACCTGGTCGCTTGTTACCACCTTGGTCAACGTAACGAGCAGTGTTGTTGAAGACTCGG 242999 Query 78201 AACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCG 78260 | ||| || | || ||||| || | ||||||||||| | ||| || ||| | ||| Sbjct 243000 AGCATGGGGACGATGCCGTTCGAGTTACCATTTGTTCCTGCAATGTAGGCTCCGGTAGCG 243059 Query 78261 CGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGT 78320 || || | || | | || ||||| || || |||| || || | |||||| Sbjct 243060 CGGATTCGATGAACGTTGAGGCCAATTCCACCAGCATTCTTGGAAATCATGGCGCAAGTC 243119 Query 78321 TTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTA 78380 |||||||| ||||||||||| || |||||||| ||| |||||| | ||| ||||| | Sbjct 243120 TTCAATGTGTCGTAGATACCGTCGATACTGTCCTCCTTCATGTCGACAAGGAAACATGAA 243179 Query 78381 GACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCAT 78440 || | ||| || ||| || ||| || | || || || |||||||| || || Sbjct 243180 GAGAGTTGGGCTTGTGGAGTACCAGCAGCGAAGAGAGTTGGGGAAGCATGCGTGAAGCAC 243239 Query 78441 TTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTC-CCATTGATGAATTCC 78499 || | || | ||||||||||| ||||| || | || || || || | ||||| || Sbjct 243240 TTCTGGGACATCAGATTGTATGTCTCAATCGCAGCCTCGATATCTTCACCG-TGAATGCC 243298 Query 78500 TACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAA 78559 || ||||| ||||| | ||| || || || | ||| |||| ||| | | Sbjct 243299 GACTGCTACTCGCATAATCATGTGTTGTGGGCGTTCGCAGATCTTGCCATTGAGGCGGAG 243358 Query 78560 CAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCTCTCG 78617 | ||||||| || | ||| || || ||||| || | ||| ||||| |||| ||| Sbjct 243359 GAGGTATGATCGCTCGAGAGTCTTGAAGCCAAAGTATTGGTAATTGAAA--TCTCGGTCG 243416 Query 78618 TAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGTAACA-ATATCCATG-ACAGTAG 78675 || | |||| | ||||| |||| | | || ||| ||||| | | ||| | | Sbjct 243417 TAGACAATAGCGGAATTAAGTTCTGCCTCGTGCTTGATAACACACTTGTATGTGGCCTCG 243476 Query 78676 TTGAAATAATAGGAGATCGTACACCATTTTTAGGATTAACATAGTTAAATAAATCTTCCA 78735 || || |||||||| | ||||| |||||| || ||||| | | ||| | Sbjct 243477 CTG--ATCATAGGAGAAAGCTTGCCATTCCGAGGATTGACGTAGTTGTAGAGGTCTGATA 243534 Query 78736 TTACA-TCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCA 78794 | ||| || || | | || || || | |||||| || || || || || |||| |||| Sbjct 243535 TCACAGTCGAGAACT-GCTTCTTGGTCTGCTTGTGGAGGTTGGAGACTGCAATTCGTGCA 243593 Query 78795 GCTAGAATAGCATAATCAGGATG 78817 || || || ||||| || ||||| Sbjct 243594 GCGAGGATGGCATAGTCGGGATG 243616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668183481440