Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016- 01-07] 71 sequences; 48,876,257 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq4 123 2e-23 seq26 111 1e-19 seq16 104 2e-17 seq37 89.7 4e-13 >seq4 Length=1888314 Score = 123 bits (136), Expect = 2e-23 Identities = 145/194 (75%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 ||||||||||||||||||||| ||| ||| | || |||| ||||| || ||||| Sbjct 715923 CTCCTTTTGGATGTTGTAATCACTCAGTGTACGCCCATCCTCCAATTGCTTACCAGCAAA 715982 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAAT 44263 |||||| |||||||| || | || | ||| ||||| || |||||| ||| || | Sbjct 715983 GATCAATCGCTGCTGGTCGGGTGGGATACCCTCCTTGTCTTGGATCTTCGACTTGACATT 716042 Query 44264 GTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTC 44323 || | |||||||| | || ||||| |||| ||||| |||||||| || | ||||| Sbjct 716043 GT--CAATGGTGTCCGAAGACTCCACTTCCAATGTAATGGTCTTTCCGGTCAAAGTCTTG 716100 Query 44324 ACGAAGATTTGCAT 44337 || ||||||||||| Sbjct 716101 ACAAAGATTTGCAT 716114 Score = 96.9 bits (106), Expect = 2e-15 Identities = 149/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||||| || ||||||||| ||||||||||| | | ||| |||| || Sbjct 716134 ACCAAATGAAGAGTCGACTCCTTTTGAATGTTGTAATCTGACAAAGTGCGGCCGTCTTCA 716193 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| || || ||||| | | |||||| || | || | || ||||| ||| Sbjct 716194 AGTTGCTTACCAGCGAAGATAAGTCTCTGCTGGTCGGGTGGGATGCCCTCCTTATCCTGA 716253 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| || ||| | |||||||| | ||||| ||||||| || || |||| Sbjct 716254 ATCTTGGACTTGACATTGT--CGATGGTGTCCGAAGATTCAACCTCCAGAGTGATAGTCT 716311 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| || | ||||| || ||||| ||||| Sbjct 716312 TTCCAGTCAAAGTCTTAACAAAGATCTGCAT 716342 >seq26 Length=969302 Score = 111 bits (122), Expect = 1e-19 Identities = 136/184 (74%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207 ||||||||||||| ||||||| ||| || | || || || ||||| |||||||||| Sbjct 292272 CCTTTTGGATGTTATAATCGGAGAGGGTACGGCCATCTTCAAGTTGCTTTCCGGCAAAGA 292213 Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGT 44265 |||||||||| || || | || | || ||||| ||| ||||| ||| || ||| Sbjct 292212 TCAAACGCTGTTGGTCCGGTGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 292153 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | || || |||| ||| || ||||| | || || ||||| ||||| |||||||| || Sbjct 292152 --CGATAGTATCGGAGGACTCGACCTCAAGAGTGATGGTCTTGCCCGTAAGGGTCTTGAC 292095 Query 44326 GAAG 44329 |||| Sbjct 292094 GAAG 292091 >seq16 Length=1327714 Score = 104 bits (114), Expect = 2e-17 Identities = 146/203 (72%), Gaps = 4/203 (2%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || || ||||| || |||||| |||||||||||||||| ||| ||| | || || Sbjct 332098 ACGAGATGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGAGAGAGTGCGGCCATCCTCG 332157 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| || || ||||||| || || || || | || | |||||||| || Sbjct 332158 AGTTGCTTGCCAGCGAAGATCAGGCGTTGTTGGTCGGGTGGAATTCCTTCCTTGTCTTGG 332217 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 || || ||| || ||| | ||||| |||| || |||||||| | || || |||| Sbjct 332218 ATTTTGGACTTGACATTGT--CGATGGTATCGGAAGACTCCACCTCGAGTGTGATAGTCT 332275 Query 44307 TTCCCGTGAGGGTCTTCACGAAG 44329 | |||||||||||||| |||||| Sbjct 332276 TGCCCGTGAGGGTCTTGACGAAG 332298 >seq37 Length=479966 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 ||||||||| |||||||| |||| || ||| || || || ||||| | ||||| Sbjct 404104 CTCCTTTTGAATGTTGTAGTCGGATAGGGTGCGGCTATCTTCAAGTTGCTTACTAGCAAA 404163 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 || | | |||||| || | || | ||| ||||| ||| ||||| ||| | | Sbjct 404164 AATAAGTCTCTGCTGGTCGGGTGGGATACCCTCCTTATCCTGAATCTTGGACTTGACGTT 404223 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | || ||||| | ||||| ||||||| || || |||||||| || | |||||| || Sbjct 404224 GTCGATAGTGTCCGAAGATTCAACCTCCAAAGTGATAGTCTTTCCAGTCAAGGTCTTAAC 404283 Query 44326 GAAGATTTGCAT 44337 ||||||||||| Sbjct 404284 AAAGATTTGCAT 404295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359990088495807