Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12-
03] 205 sequences; 69,693,031 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq93 132 1e-25
>seq93
Length=1762202
Score = 132 bits (146), Expect = 1e-25
Identities = 182/252 (72%), Gaps = 2/252 (1%)
Strand=Plus/Plus
Query 230387 TCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC- 230445
||||||| || || ||||| | || |||||||| | || ||| |||| || |||
Sbjct 1532168 TCATTACCGAGGCTGTTGAGATTGAGCAGGAGTTCTTGACCGAGGCTCTTCCTTG-CGCA 1532226
Query 230446 CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505
|| | ||||||||| | | || ||| || |||||||| ||||| || || || |
Sbjct 1532227 CTCCTCGGCATGAACTCCAACCTCATGAAGCAATACATCGAGTTCGTTGCTGATCGTCTC 1532286
Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565
||||||| ||||| ||||||| || ||||| || ||||| || | || ||||||
Sbjct 1532287 CTTGTTGCTCTTGGCAACGAGAAGGTCTACAAGTCAGCCAACCCATTCGACTTCATGGAG 1532346
Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGG 230625
||| || ||| || ||||||||||||||||| |||||||| ||||||| || |
Sbjct 1532347 AACATCTCACTTGCCGGAAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCAAAAA 1532406
Query 230626 CCTGGTGTGATG 230637
||||||| |||
Sbjct 1532407 GCTGGTGTCATG 1532418
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057821221559150
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |