Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12- 03] 205 sequences; 69,693,031 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq93 132 1e-25 >seq93 Length=1762202 Score = 132 bits (146), Expect = 1e-25 Identities = 182/252 (72%), Gaps = 2/252 (1%) Strand=Plus/Plus Query 230387 TCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC- 230445 ||||||| || || ||||| | || |||||||| | || ||| |||| || ||| Sbjct 1532168 TCATTACCGAGGCTGTTGAGATTGAGCAGGAGTTCTTGACCGAGGCTCTTCCTTG-CGCA 1532226 Query 230446 CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505 || | ||||||||| | | || ||| || |||||||| ||||| || || || | Sbjct 1532227 CTCCTCGGCATGAACTCCAACCTCATGAAGCAATACATCGAGTTCGTTGCTGATCGTCTC 1532286 Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565 ||||||| ||||| ||||||| || ||||| || ||||| || | || |||||| Sbjct 1532287 CTTGTTGCTCTTGGCAACGAGAAGGTCTACAAGTCAGCCAACCCATTCGACTTCATGGAG 1532346 Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGG 230625 ||| || ||| || ||||||||||||||||| |||||||| ||||||| || | Sbjct 1532347 AACATCTCACTTGCCGGAAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCAAAAA 1532406 Query 230626 CCTGGTGTGATG 230637 ||||||| ||| Sbjct 1532407 GCTGGTGTCATG 1532418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057821221559150