Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12- 03] 205 sequences; 69,693,031 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq93 86.0 6e-12 >seq93 Length=1762202 Score = 86.0 bits (94), Expect = 6e-12 Identities = 141/200 (71%), Gaps = 4/200 (2%) Strand=Plus/Minus Query 16985 CCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTC 17044 |||||||| | ||||||||||||||| || |||| || | ||| || || ||| Sbjct 1532093 CCCTCGTCACGAGAGATAAGTTCGTTAGAGAAAGTCAGACCAGCCATGAGACCACGCTTC 1532034 Query 17045 TTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAAC 17104 |||||||| || || | |||||||| ||| ||||| ||||||||||| | || || Sbjct 1532033 TTTAACCAGAAGATAGATGCGAACGATCCACTGAAGAAGATACCCTCGACAGCGGCGAAT 1531974 Query 17105 GCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTG-CA-CCCACT 17162 |||| | |||| || | || | | |||| | ||||| |||| || |||| | Sbjct 1531973 GCGACGAGACGTTGAGCAAAGGTAGAGCTCTTGTCTTGGATCCA--TCTGACAGCCCAGT 1531916 Query 17163 CGGCTTTTTGCTTTATGCAA 17182 |||| || | ||| |||||| Sbjct 1531915 CGGCCTTCTTCTTGATGCAA 1531896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517544273789400