Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12-
03] 205 sequences; 69,693,031 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq93 111 1e-19
seq99 89.7 4e-13
>seq93
Length=1762202
Score = 111 bits (122), Expect = 1e-19
Identities = 151/211 (72%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
|||||| |||| || ||||| |||||||||||||| ||||||| || || ||||||
Sbjct 806548 CACCAAATGGAGAGTTGACTCCTTTTGAATGTTGTAGTCGCTCAAGGTACGACCATCCTC 806489
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
| || || ||||| |||| | |||||||| || || || || |||||||| ||
Sbjct 806488 CAATTGCTTACCAGCAAAGATCAATCGCTGCTGGTCAGGTGGAATACCCTCCTTATCCTG 806429
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
||| ||| || || | || | |||||| | ||| || || | || | || ||
Sbjct 806428 AATCTTTGACTTGACATTGTCAATGGTGTCTGACGACTCCACTTCCAATGTGATTGTCTT 806369
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
||| |||| ||| || ||||| |||||||||
Sbjct 806368 GCCAGTCAAAGTCTTGACAAAGATCTGCATG 806338
Score = 93.3 bits (102), Expect = 4e-14
Identities = 148/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||| | || ||||| || ||||| ||||| || || || | ||||||
Sbjct 806319 ACCAAGTGCAGGGTGGACTCCTTCTGAATATTGTAGTCTGACAGGGTTCTGCCATCCTCC 806260
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
| || || || ||| |||| ||||| ||||||||||| || || |||||||| ||| |
Sbjct 806259 AATTGCTTACCGGCGAAGATAAGACGTTGCTGATCGGGTGGGATACCCTCCTTATCTTGA 806200
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| || ||||| | |||| ||||| | || | || ||||| | || | || ||
Sbjct 806199 ATCTTCGACTTAACGTTGTCGATTGTGTCGGATGAT-TCAACCTCAAGAGTGATGGTCTT 806141
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||||| || || || || ||||||||
Sbjct 806140 TCCGGTCAAGGTCTTGACGAAGATCTGCAT 806111
Score = 84.2 bits (92), Expect = 2e-11
Identities = 126/179 (70%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595
|||| || |||||||| || || || ||||| | |||||| || || |||||
Sbjct 805802 TGGAGAGTGGACTCTTTCTGGATATTATAATCCGAAAGAGTGCGGCCGTCTTCAAGCTGC 805743
Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655
||||||||| |||| | || || || ||||| || |||||||||||||| ||| ||
Sbjct 805742 TTTCCAGCGAAGATCAAGCGTTGTTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTTG 805683
Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
|| || | |||| ||| || || ||| ||||||| ||| | || ||||| ||
Sbjct 805682 CTCTTTACATTATCGATGGTATCGCTGGACTCAACCTCGAGGGTGATGGTCTTGCCAGT 805624
>seq99
Length=1752785
Score = 89.7 bits (98), Expect = 4e-13
Identities = 127/179 (71%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610
||||| |||||||||||||||| || || ||||||||| || || |||||| ||||
Sbjct 456626 TTTTGGATGTTGTAATCGCTCAGGGTACGGCCATCCTCGAGTTGCTTGCCAGCGAAGATC 456567
Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670
|| || || || ||||| || || || |||||||| || || || || | |||
Sbjct 456566 AGGCGTTGTTGGTCGGGTGGGATTCCTTCCTTGTCCTGGATCTTGGACTTGACGTTGTCG 456507
Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 118729
| ||||| | ||| ||||||| ||| | || ||||| || || || || || ||
Sbjct 456506 ATAGTGTCGCTCGACTCCACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTAACGAA 456448
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433829316101860
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |