Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12-
03] 205 sequences; 69,693,031 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq93 82.4 6e-11
>seq93
Length=1762202
Score = 82.4 bits (90), Expect = 6e-11
Identities = 159/235 (68%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 18091 TTTGTTATCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGT 18150
||| || || || || || | || |||| || || ||||| || |||||||||||||
Sbjct 806573 TTTATTGACCACCACGGAGACGGAGCACCAAATGGAGAGTTGACTCCTTTTGAATGTTGT 806514
Query 18151 AGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGAT 18210
||||| || || || ||| |||||||| || || ||| |||| | || || || |
Sbjct 806513 AGTCGCTCAAGGTACGACCATCCTCCAATTGCTTACCAGCAAAGATCAATCGCTGCTGGT 806454
Query 18211 CCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGG 18270
| || | || |||||||| ||| | | |||||| | ||| ||||| |
Sbjct 806453 CAGGTGGAATACCCTCCTTATCCTGAATCTTTGACTTGACATTGTCAATGGTGTCTGACG 806394
Query 18271 GCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
||| ||| | ||||| | ||||| ||||| || || ||||| || |||||
Sbjct 806393 ACTCCACTTCCAATGTGATTGTCTTGCCAGTCAAAGTCTTGACAAAGATCTGCAT 806339
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379343052232725
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |