Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12-
03] 205 sequences; 69,693,031 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq124 297 2e-75
seq93 100 3e-16
seq99 89.7 5e-13
>seq124
Length=198120
Score = 297 bits (328), Expect = 2e-75
Identities = 561/818 (69%), Gaps = 8/818 (1%)
Strand=Plus/Plus
Query 23065 GTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTT 23124
|||||| ||||| || || || || ||| | || ||||| | || |||||||
Sbjct 125993 GTACTCCACAATCTCAGTGCAGAGGTTGGAGCTTCGAATTGTGCCGAGGTTCTTCTGGTT 126052
Query 23125 GCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGA 23184
||| |||| |||||| | |||||||||||||||| | || | || |||||| ||| |
Sbjct 126053 GCTCTTTCTATTGCAAGCATCCTTGTAGAGCATGAATGGATTCCCAGTCTCGGTCTGTGC 126112
Query 23185 CTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCACGTACC-TGCCTTCTT 23243
||| | ||| | ||| | |||| || | | ||| || || |||||||
Sbjct 126113 CTCCAAGATGGAGTACCAAAGTTTCTGTGCCTTGA-TGGTCTTGCGACCCTTGCCTTCAC 126171
Query 23244 CCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTA-ACAGTCGGCCAGGCCGGGC 23302
||||||||| | ||| | || || || || |||| || ||| || |||| ||| ||
Sbjct 126172 GCTCGTACTTCTCGTATAGAGCCTCGAACTCATCACCATAGACA-TCAGCCAAGCCTGGG 126230
Query 23303 GATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGA 23362
| | | || ||||| | | ||||| | | || ||||| || |||| || |||
Sbjct 126231 CACTCGTTGGGGCACATCAAAGTCCACTCTCCATTCTTCTCAACACGCTTCATGAAGAGA 126290
Query 23363 TCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTC 23422
|| || ||||| | |||||||| || || || || || || |||||||||||| ||||
Sbjct 126291 TCAGGGATCCACAAGGCGTAGAAGAGATCACGAGCTCGGACTTCCTCTTTGCCGTGGTTC 126350
Query 23423 TTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAAC 23482
||| | ||| | | || || || || || ||||| ||||||||||| | ||| ||
Sbjct 126351 TTTCGGAGATCAAGGTACTCGAAGACATCTGCGTGCCATGGCTCGAGGTAGATGGCGAAA 126410
Query 23483 GCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTT 23542
|| || |||||||| ||||| || || |||||||| | ||| ||||||||| | || | |
Sbjct 126411 GCACCTGGTCTCTTGTTGCCACCTTGGTCGACGTATCTGGCAGTGTTGTTGAAGACACGT 126470
Query 23543 AGCATCGGCACGAGACCGTTGGACGCGCCGCCTACG--CCCGCCACACTCGAACCTTTTG 23600
||||| || |||| ||||||||| ||| | || ||||| | | ||| | |
Sbjct 126471 AGCATGGGAACGATACCGTTGGAGTTTCCG--TTCGTTCCCGCAATGTAGGCACCGGTAG 126528
Query 23601 CTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATT 23660
| |||| |||||| | || ||| || || || | || || ||||| |||||
Sbjct 126529 CACGAATTCGGTGAACATTGAGACCGATTCCACCAGCATTCTTGGAGATCATGGCGCAAG 126588
Query 23661 GTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACG 23720
|||| || |||||||| || || ||||| |||||||| | ||| | ||| || |
Sbjct 126589 TCTTCAATGTATCGTAGATACCGTCAATGCTATCCTCTTTCATGTCGATAAGGAAGCATG 126648
Query 23721 AAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGT 23780
|||| | ||| |||| || ||| |||| | ||| | || ||| || || || |||
Sbjct 126649 AAGAGAGTTGTGCTTGTGGTGTACCGGCGGCGAATAAAGTTGGGGAAGCATGGGTGAAGC 126708
Query 23781 ATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATAC 23840
| | ||||| | ||||| || |||||||| || ||||| || || ||||| ||||
Sbjct 126709 ACTTCTGGGACATCAAGTTGTATGTCTCGATGGCAGCCTCAATATCTTCACCGTGAATAC 126768
Query 23841 CGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCG 23878
| | || || ||||| ||||| | ||| || | ||||
Sbjct 126769 CAACAGCCACTCGCATAATCATATGTTGTGGGCGCTCG 126806
>seq93
Length=1762202
Score = 100 bits (110), Expect = 3e-16
Identities = 152/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| || || || |||||| |||| ||||| || ||||| | || || || ||||
Sbjct 806338 CATGCAGATCTTTGTCAAGACTTTGACTGGCAAGACAATCACATTGGAAGTGGAGTCGTC 806397
Query 31252 CGACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310
|||| | || | ||||| || ||| | ||| ||||| || | || || ||||
Sbjct 806398 AGACACCATTGACAATGTCAAGTCAAAGATTCA-GGATAAGGAGGGTATTCCACCTGACC 806456
Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATA 31370
||||||| | || || ||||| || || ||||| || | || ||||||| || |
Sbjct 806457 AGCAGCGATTGATCTTTGCTGGTAAGCAATTGGAGGATGGTCGTACCTTGAGCGACTACA 806516
Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
|||||||||| || || ||||| ||| |||| ||
Sbjct 806517 ACATTCAAAAGGAGTCAACTCTCCATTTGGTGCT 806550
Score = 82.4 bits (90), Expect = 7e-11
Identities = 104/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 31205 GTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCGAA 31264
|| ||||| ||||| || || || |||||| | || || ||| | ||||||| ||||
Sbjct 805895 GTCAAGACCCTGACTGGAAAGACCATCACCCTGGAGGTAGAATCCTCCGACACCATCGAC 805954
Query 31265 ACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATA 31324
| || || || || ||||||||||||| | || |||||||| || || || ||
Sbjct 805955 AACGTTAAGTCGAAGATCCAGGACAAGGAAGGCATCCCTCCCGACCAACAACGCCTGATC 806014
Query 31325 TTCGCTGGCAAACAGTTGGAAGA 31347
||||||||||| || | |||||
Sbjct 806015 TTCGCTGGCAAGCAACTCGAAGA 806037
>seq99
Length=1752785
Score = 89.7 bits (98), Expect = 5e-13
Identities = 127/179 (71%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 31202 TTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTC 31261
||||| ||||| || || ||||| || |||||| |||| || || || ||||| | ||
Sbjct 456448 TTCGTTAAGACCCTCACGGGCAAGACTATCACCCTCGAGGTGGAGTCGAGCGACACTATC 456507
Query 31262 GAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTA 31321
|| | ||||| | || |||||||||||| | || |||||||| || || ||
Sbjct 456508 GACAACGTCAAGTCCAAGATCCAGGACAAGGAAGGAATCCCACCCGACCAACAACGCCTG 456567
Query 31322 ATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAA 31380
|| ||||||||||| || | || || || |||||||||| ||||| |||||
Sbjct 456568 ATCTTCGCTGGCAAGCAACTCGAGGATGGCCGTACCCTGAGCGATTACAACATCCAAAA 456626
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445765257723600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |