Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12-
03] 205 sequences; 69,693,031 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq124 129 1e-24
seq93 102 2e-16
seq64 102 2e-16
>seq124
Length=198120
Score = 129 bits (142), Expect = 1e-24
Identities = 428/657 (65%), Gaps = 18/657 (3%)
Strand=Plus/Plus
Query 94392 ACCTTTGCCTTCAGCCTCATATTTCTCGTACAACGCCTTAAACTCTTCGCCATGGACGTC 94451
||| ||||||||| ||| || |||||||| | |||| ||||| || |||| ||| ||
Sbjct 126158 ACCCTTGCCTTCACGCTCGTACTTCTCGTATAGAGCCTCGAACTCATCACCATAGACATC 126217
Query 94452 GGAAAGGCCAGGGCACTCGTGGGGGCACATCAGGGACCAATTCTTCCCAGCCTTC---AC 94508
| | ||| |||||||||| ||||||||||| | ||| | || ||| |||| ||
Sbjct 126218 AGCCAAGCCTGGGCACTCGTTGGGGCACATCAAAGTCCACT-CT--CCATTCTTCTCAAC 126274
Query 94509 TCTCTCCATGAAGAGATCAGATACCCAGATAGCTGGGAAAAGATCCCTCGTCCTCAAATC 94568
| || |||||||||||||| | ||| | || ||| ||||| | | | | ||
Sbjct 126275 ACGCTTCATGAAGAGATCAGGGATCCACAAGGCGTAGAAGAGATCACGAGCTCGGACTTC 126334
Query 94569 TTCATTACCGGCATTCTTTCTGCAGTCAATAAAGTCCTTCACGTCCAGATGCCAATCAGA 94628
|| || ||| ||||||| | |||| | || || || |||||
Sbjct 126335 CTCTTTGCCGTGGTTCTTTCGGAGATCAAGGTACTCGAAGACATCTGCGTGCCATGGCTC 126394
Query 94629 AATATAGATGGCTGCAGCTCCTCTCCTCTTGTCTCCTCCCTGGCTAACCTTTTTCACAGA 94688
| |||||||| ||| ||| ||||||| || || ||| || | | | |||
Sbjct 126395 GAGGTAGATGGCGAAAGCACCTGGTCTCTTGTTGCCACCTTGGTCGACGTATCTGGCAGT 126454
Query 94689 GACGTTAAAGATTTGGAGGAACGCCATGAGACCAGGGTGGGTACCACTCCATGACGAAAT 94748
| ||| |||| | || | | | || ||| | | | || || | || |||
Sbjct 126455 GTTGTTGAAGACACGTAGCATGGGAACGATACCGTTGGAGTTTCCGTTCGTTCCCGCAAT 126514
Query 94749 GGGGCTTCCTTTTGCCCTCAAATCA-TGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGG 94807
| | || | || | || || |||| | || |||| ||| |||||| ||||||
Sbjct 126515 GTAGGCACCGGTAGCACG-AATTCGGTGAACATTGAGACCGATTCCACCAGCATTCTTGG 126573
Query 94808 AGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATGCTATCATCTTGAAGGC 94867
|||| || || ||| | ||||| || ||||| ||||||||||| |||| | |
Sbjct 126574 AGATCATGGCGCAAGTCTTCAATGTATCGTAGATACCGTCAATGCTATCCTCTTTCATGT 126633
Query 94868 CCAGAAGGAAGCACGAGGAAAGTTG-GGGTGTGACTGTTCC----ACAATTAAACAGTGT 94922
| | ||||||||| || || ||||| | |||| ||| || | | |||| ||
Sbjct 126634 CGATAAGGAAGCATGAAGAGAGTTGTGCTTGTG-GTGTACCGGCGGCGAATAAA----GT 126688
Query 94923 GGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTCAATGACAGATTT 94982
|||||||||||||| || | | | ||||| | | ||||| || ||| ||| |
Sbjct 126689 TGGGGAAGCATGGGTGAAGCACTTCTGGGACATCAAGTTGTATGTCTCGATGGCAGCCTC 126748
Query 94983 GATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCTGAGGGCGCTC 95039
|| ||| |||||||| || |||||||| ||||||||||| | || ||||||||
Sbjct 126749 AATATCTTCACCGTGAATACCAACAGCCACTCGCATAATCATATGTTGTGGGCGCTC 126805
>seq93
Length=1762202
Score = 102 bits (112), Expect = 2e-16
Identities = 158/225 (70%), Gaps = 3/225 (1%)
Strand=Plus/Plus
Query 101851 CATCAAGAAGAAGGAGCAGTGGGCTATTAATTGGATGCAAAGCAATAACGAT---TTGGC 101907
|||||||||||||| | |||||| | | ||||| ||| ||| | | | || ||
Sbjct 1531899 CATCAAGAAGAAGGCCGACTGGGCTGTCAGATGGATCCAAGACAAGAGCTCTACCTTTGC 1531958
Query 101908 GGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATC 101967
||| | || || || || || || || || |||||||| ||||| | ||||||||
Sbjct 1531959 TCAACGTCTCGTCGCATTCGCCGCTGTCGAGGGTATCTTCTTCAGTGGATCGTTCGCATC 1532018
Query 101968 CATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCAT 102027
|| |||||| | ||||| | ||| | || ||||||| || | ||| || || | ||
Sbjct 1532019 TATCTTCTGGTTAAAGAAGCGTGGTCTCATGGCTGGTCTGACTTTCTCTAACGAACTTAT 1532078
Query 102028 TTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072
||| | ||||| |||||||| ||||||||| ||| | || ||
Sbjct 1532079 CTCTCGTGACGAGGGTCTTCACACCGACTTTGCTTGCCTTCTCTT 1532123
>seq64
Length=368017
Score = 102 bits (112), Expect = 2e-16
Identities = 159/221 (72%), Gaps = 10/221 (5%)
Strand=Plus/Plus
Query 35387 AGAGCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAA 35446
||||||| || || | ||||| ||||| || ||||||||||| |||||||||||||||
Sbjct 95435 AGAGCAGTTGGCGACCTCGGACCAGTATATGGTTTCCAATGGCGGCATTTTGGTGCTGAA 95494
Query 35447 TATGATACCTGTTC-TTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAA---TAT 35502
|| | | || || | || ||||| || || || | |||||| | || | |||
Sbjct 95495 TACG-TGGATGCTCAAACGGACTATACGGGGAAAGGCGTGGATCAACTTGCAGAAGTTAT 95553
Query 35503 ACTAAAGACCCTGAGAGAA-AATCCAGATGATAGAAGGATGATTATGACGGCATGGAATC 35561
| ||| |||| |||| ||||| | || |||| || ||| | | || |||||||
Sbjct 95554 CCACAAG---CTGA-AGAACAATCCCTACGACCGAAGAATCATTCTCAGCGCGTGGAATC 95609
Query 35562 CTATGGATCTTCACCTTATGGCTCTTCCTCCATGCCACATG 35602
| | |||||| | || |||||||| ||||||||||| |||
Sbjct 95610 CCAAGGATCTGAAGCTCATGGCTCTACCTCCATGCCATATG 95650
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989581400795775
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |