Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12-
03] 205 sequences; 69,693,031 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq124 141 1e-28
seq93 95.1 2e-14
>seq124
Length=198120
Score = 141 bits (156), Expect = 1e-28
Identities = 399/608 (66%), Gaps = 6/608 (1%)
Strand=Plus/Plus
Query 63189 TCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGAC 63248
|||||||| || || | |||| |||| | || || || | || |||||||| | |
Sbjct 126195 TCGAACTCATCACCATAGACATCAGCCAAGCCTGGGCACTCGTTGGGGCACATCAAAGTC 126254
Query 63249 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63308
|||||||| | | || || || ||||| ||||||||||| ||||| | || ||
Sbjct 126255 CACTCTCCATTCTTCTCAACACGCTTCATGAAGAGATCAGGGATCCACAAGGCGTAGAAG 126314
Query 63309 AGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63368
||||| | | || |||||| || || |||||| ||||| ||| || | |
Sbjct 126315 AGATCACGAGCTCGGACTTCCTCTTTGCCGTGGTTCTTTCGGAGATCAAGGTACTCGAAG 126374
Query 63369 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63428
| ||| | ||||| || || | ||| ||||| | | | || || | ||||| || ||
Sbjct 126375 ACATCTGCGTGCCATGGCTCGAGGTAGATGGCGAAAGCACCTGGTCTCTTGTTGCCACCT 126434
Query 63429 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGAT 63488
|| || | |||||| || ||||| || | || | | ||| |||| |||||||| ||
Sbjct 126435 TGGTCGACGTATCTGGCAGTGTTGTTGAAGACACGTAGCATGGGAACGATACCGTTGGAG 126494
Query 63489 ATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAAT--ATTACTAATTGATAGAC 63546
| || || || || | || ||| | || | |||||||| | |||| ||||
Sbjct 126495 TTTCCGTTCGTTCCCGCAATGTAGGCACCGGTAGCACGAATTCGGTGAACATTG--AGAC 126552
Query 63547 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTT 63606
| ||||| || || | || ||||| | ||||| || || || || ||||| || |
Sbjct 126553 CGATTCCACCAGCATTCTTGGAGATCATGGCGCAAGTCTTCAATGTATCGTAGATACCGT 126612
Query 63607 CTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTC 63666
| |||||||| || |||||| | || || || ||| | ||| | | || |
Sbjct 126613 CAATGCTATCCTCTTTCATGTCGATAAGGAAGCATGAAGAGAGTTGTGCTTGTGGTGTAC 126672
Query 63667 CCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACG 63726
| || ||||| || || ||||| || || || || || | || | | ||||| |
Sbjct 126673 CGGCGGCGAATAAAGTTGGGGAAGCATGGGTGAAGCACTTCTGGGACATCAAGTTGTATG 126732
Query 63727 TCTCAATAGCTGAGTCTATATC-CCATTGATGAATTCCTACTGCGACACGCATTAACATG 63785
|||| || || | || ||||| || | ||||| || || || || ||||| | |||
Sbjct 126733 TCTCGATGGCAGCCTCAATATCTTCACCG-TGAATACCAACAGCCACTCGCATAATCATA 126791
Query 63786 TGCTGAGG 63793
|| || ||
Sbjct 126792 TGTTGTGG 126799
>seq93
Length=1762202
Score = 95.1 bits (104), Expect = 2e-14
Identities = 194/285 (68%), Gaps = 5/285 (2%)
Strand=Plus/Minus
Query 33852 TAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAAT 33911
|| || ||||| | ||| ||| | || ||||||||||| || || ||||| ||
Sbjct 1531792 TATGTGTCGATGAGGAGAGAGTACGTCTCGGAATGAATGTTCTCCATCATGATCTGGAAG 1531733
Query 33912 CCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTT 33971
|||||||| || | |||||||| ||||| ||||| || ||| || || | | ||
Sbjct 1531732 CCGTAGAAGCAGCGAGCCTCGGGGATCTGAACTTCACCACTAAAGCGCTCGACAAGGTTC 1531673
Query 33972 TCATTCACTATTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATA---T 34028
|| || || |||||||| || || || || || | || ||| || || ||
Sbjct 1531672 TCGTTGACGATTCCATCTGAAGCGGCGAAGAATGCAAGAACGTGTGAGATGAAGTAACGC 1531613
Query 34029 TTTTCGTC-TGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTC 34087
| ||||| | | | | | || ||||| || | || ||| || || | ||| | |||||
Sbjct 1531612 TCATCGTCATTGAGCTTG-TTGTTCCAGTCGTGGAGATCCTTCGACAGATCAATCTCTTC 1531554
Query 34088 CACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGAT 34132
| ||||| || |||||||| ||||| || ||||| | ||||||
Sbjct 1531553 TGCGGTCCAGAAAGATGCCTCGGCCTTCTTGTACATCTGCCAGAT 1531509
Score = 93.3 bits (102), Expect = 5e-14
Identities = 331/514 (64%), Gaps = 5/514 (1%)
Strand=Plus/Minus
Query 33290 TTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATT 33349
||||||||| ||||| ||||| || ||||| || || || ||||| | | ||| || ||
Sbjct 1532406 TTTTTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTTCCGGCAAGTGAGATGTT 1532347
Query 33350 TTCCATGAAATCAAACGGATTGG-TAACATTGTAAAtttttttAAATCCCAATTCAGAAA 33408
|||||||| || || || |||| | || ||||| | || | || | || ||
Sbjct 1532346 CTCCATGAAGTCGAATGGGTTGGCTGAC-TTGTAGACCTTCTCGTTGCCAAGAGCAACAA 1532288
Query 33409 TCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGA 33468
| | ||| || ||||| || || ||| ||||| | | | ||||| || | ||
Sbjct 1532287 GGAGACGATCAGCAACGAACTCGATGTATTGCTTCATGAGGTTGGAGTTCATGCCGAGGA 1532228
Query 33469 GTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAA 33528
|| ||||||||| | || | || || || ||||| || || | || || |
Sbjct 1532227 GTGCGCAAGGAAGAGCCTCGGTCAAGAACTCCTGCTCAATCTCAACAGCCTCGGTAATGA 1532168
Query 33529 TAAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACATCAAACATGCGA 33588
| |||| || | || || | || ||||| || | | || || |
Sbjct 1532167 CGTCTTGGACGGCTTGCTTGCTTGGGCGGTGCTTCAAATGAGAGAAGAGAAGGCAAGCAA 1532108
Query 33589 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCA 33648
| ||| ||| ||||||||||| | | || | ||||||||| || || || || | ||
Sbjct 1532107 AGTCGGTGTGAAGACCCTCGTCACGAGAGATAAGTTCGTTAGAGAAAGTCAGACCAGCCA 1532048
Query 33649 TTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTT 33708
| || |||||||| || | ||| || || || ||||| ||||| |||||||| || |
Sbjct 1532047 TGAGACCACGCTTCTTTAACCAGAAGATAGATGCGAACGATCCACTGAAGAAGATACCCT 1531988
Query 33709 CTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGC---TGTCATGTATCCACT 33765
| || || || || || | || | | || | | || |||| || |||||
Sbjct 1531987 CGACAGCGGCGAATGCGACGAGACGTTGAGCAAAGGTAGAGCTCTTGTCTTGGATCCATC 1531928
Query 33766 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 33799
| |||||| ||||||||||| || | |||||
Sbjct 1531927 TGACAGCCCAGTCGGCCTTCTTCTTGATGCAAGG 1531894
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629815986092400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |