Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12- 03] 205 sequences; 69,693,031 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq124 104 2e-17 >seq124 Length=198120 Score = 104 bits (114), Expect = 2e-17 Identities = 378/584 (65%), Gaps = 12/584 (2%) Strand=Plus/Plus Query 37966 AATCCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCC 38025 || ||||| || ||| || ||||| | || ||| ||| ||| || || || || | | Sbjct 126222 AAGCCTGGGCACTCGTTGGGGCACATCAAAGTCCACTCTCCATTCTTCTCAACACGCTTC 126281 Query 38026 ATAAATAAATCAGGTACCCATAATGCAGTA-AATAAATCTTTGGTTCTATATTCTTCGTT 38084 || || | |||||| | ||| || || ||| || | ||| | || ||| || || Sbjct 126282 ATGAAGAGATCAGGGATCCACAAGGC-GTAGAAGAGATCACGAGCTCGGACTTCCTCTTT 126340 Query 38085 CCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATA 38144 || ||||||| | || | ||||| | ||| ||||||||||| || | || Sbjct 126341 GCCGTGGTTCTTTCGGAGATCAAGGTACTCGAAGACATCTGCGTGCCATGGCTCGAGGTA 126400 Query 38145 AATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATT 38204 || | | || |||||||| || | || || || | | ||||| | ||||| || Sbjct 126401 GATGGCGAAAGCACCTGGTCTCTTGTTGCCACCTTGGTCGACGTATCTGGCAGTGTTGTT 126460 Query 38205 ATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGT 38264 | | | || ||| || || ||||| || || || ||||| | || | || || | Sbjct 126461 GAAGACACGTAGCATGGGAACGATACCGTTGGAGTTTCCGTTCGTTCCCGCAATGTAGGC 126520 Query 38265 ACCCTTAGCTCGTATAT--TACTTATCGACAATCCTATTCCACCTGCATGTTTTGATATT 38322 ||| |||| || || | || || | || |||||||| |||| || || || Sbjct 126521 ACCGGTAGCACGAATTCGGTGAACATTGAGA--CCGATTCCACCAGCATTCTTGGAGATC 126578 Query 38323 AAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGT 38382 | ||||| || || ||||| | ||||| || || || || || || || || | Sbjct 126579 ATGGCGCAAGTCTTCAATGTATCGTAGATACCGTCAATGCTATCCTCTTTCAT--GTCG- 126635 Query 38383 ATAA---AACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGAT 38439 |||| | || ||| | ||| | ||| || |||||| ||||| || || || Sbjct 126636 ATAAGGAAGCATGAAGAGAGTTGTGCTTGTGGTGTACCGGCGGCGAATAAAGTTGGGGAA 126695 Query 38440 GCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATATCA 38499 ||||| |||| || || | |||| | || ||||| || || || | || ||||| Sbjct 126696 GCATGGGTGAAGCACTTCTGGGACATCAAGTTGTATGTCTCGATGGCAGCCTCAATATCT 126755 Query 38500 CCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGG 38543 | ||||||||||| | || || | ||| | |||||||||||| Sbjct 126756 TCACCGTGAATACCAACAGCCACTCGCATAATCATATGTTGTGG 126799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468523599405200