Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12-
03] 205 sequences; 69,693,031 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq124 104 2e-17
>seq124
Length=198120
Score = 104 bits (114), Expect = 2e-17
Identities = 378/584 (65%), Gaps = 12/584 (2%)
Strand=Plus/Plus
Query 37966 AATCCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCC 38025
|| ||||| || ||| || ||||| | || ||| ||| ||| || || || || | |
Sbjct 126222 AAGCCTGGGCACTCGTTGGGGCACATCAAAGTCCACTCTCCATTCTTCTCAACACGCTTC 126281
Query 38026 ATAAATAAATCAGGTACCCATAATGCAGTA-AATAAATCTTTGGTTCTATATTCTTCGTT 38084
|| || | |||||| | ||| || || ||| || | ||| | || ||| || ||
Sbjct 126282 ATGAAGAGATCAGGGATCCACAAGGC-GTAGAAGAGATCACGAGCTCGGACTTCCTCTTT 126340
Query 38085 CCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATA 38144
|| ||||||| | || | ||||| | ||| ||||||||||| || | ||
Sbjct 126341 GCCGTGGTTCTTTCGGAGATCAAGGTACTCGAAGACATCTGCGTGCCATGGCTCGAGGTA 126400
Query 38145 AATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATT 38204
|| | | || |||||||| || | || || || | | ||||| | ||||| ||
Sbjct 126401 GATGGCGAAAGCACCTGGTCTCTTGTTGCCACCTTGGTCGACGTATCTGGCAGTGTTGTT 126460
Query 38205 ATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGT 38264
| | | || ||| || || ||||| || || || ||||| | || | || || |
Sbjct 126461 GAAGACACGTAGCATGGGAACGATACCGTTGGAGTTTCCGTTCGTTCCCGCAATGTAGGC 126520
Query 38265 ACCCTTAGCTCGTATAT--TACTTATCGACAATCCTATTCCACCTGCATGTTTTGATATT 38322
||| |||| || || | || || | || |||||||| |||| || || ||
Sbjct 126521 ACCGGTAGCACGAATTCGGTGAACATTGAGA--CCGATTCCACCAGCATTCTTGGAGATC 126578
Query 38323 AAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGT 38382
| ||||| || || ||||| | ||||| || || || || || || || || |
Sbjct 126579 ATGGCGCAAGTCTTCAATGTATCGTAGATACCGTCAATGCTATCCTCTTTCAT--GTCG- 126635
Query 38383 ATAA---AACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGAT 38439
|||| | || ||| | ||| | ||| || |||||| ||||| || || ||
Sbjct 126636 ATAAGGAAGCATGAAGAGAGTTGTGCTTGTGGTGTACCGGCGGCGAATAAAGTTGGGGAA 126695
Query 38440 GCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATATCA 38499
||||| |||| || || | |||| | || ||||| || || || | || |||||
Sbjct 126696 GCATGGGTGAAGCACTTCTGGGACATCAAGTTGTATGTCTCGATGGCAGCCTCAATATCT 126755
Query 38500 CCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGG 38543
| ||||||||||| | || || | ||| | ||||||||||||
Sbjct 126756 TCACCGTGAATACCAACAGCCACTCGCATAATCATATGTTGTGG 126799
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468523599405200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |