Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12- 03] 205 sequences; 69,693,031 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq124 134 2e-26 >seq124 Length=198120 Score = 134 bits (148), Expect = 2e-26 Identities = 617/968 (64%), Gaps = 18/968 (2%) Strand=Plus/Plus Query 65736 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 65795 |||| || |||| || ||||| || ||||||| || | | || | | |||||| Sbjct 125949 GCAAGGGAAGCCAAGTTGCAAACAGCGACCTCATCAGGAGCACAGTACTCCACAATCTCA 126008 Query 65796 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 65855 ||||| || || | || || || | || | || || |||||| | || || Sbjct 126009 GTGCAGAGGTTGGAGCTTCGAATTGTGCCGAGGTTCTTCTGGTTGCTCTTTCTATTGCAA 126068 Query 65856 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 65915 |||||||| || || ||||||||| | ||||| || |||| | || | || | | | Sbjct 126069 GCATCCTTGTAGAGCATGAATGGATTCCCAGTCTCGGTCTGTGCCTCCAAGATGGAGTAC 126128 Query 65916 CAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCTT---TTCTCTTTCGTA--TAGT 65969 || | | || | ||||| || | ||| | ||| ||| | ||||| | Sbjct 126129 CAAA-GTTTCTGTGCCTTGATGGTC---TTGCGACCCTTGCCTTCACGCTCGTACTTCTC 126184 Query 65970 GTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGA 66029 ||||| | | |||||||| || || | |||| |||| || || || || | || Sbjct 126185 GTATAGAGCC--TCGAACTCATCACCATAGACATCAGCCAAGCCTGGGCACTCGTTGGGG 126242 Query 66030 CACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAA 66089 |||||||| | ||||||||| | | || || || ||||| ||||||||||| ||||| Sbjct 126243 CACATCAAAGTCCACTCTCCATTCTTCTCAACACGCTTCATGAAGAGATCAGGGATCCAC 126302 Query 66090 AGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCG 66149 | || || | ||| | | || |||||| || || |||||| ||||| Sbjct 126303 AAGGCGTAGAAGAGATCACGAGCTCGGACTTCCTCTTTGCCGTGGTTCTTTCGGAGATCA 126362 Query 66150 AGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGT 66209 ||| || | | | ||| ||||| || || | ||| ||||| | | | || || | Sbjct 126363 AGGTACTCGAAGACATCTGCGTGCCATGGCTCGAGGTAGATGGCGAAAGCACCTGGTCTC 126422 Query 66210 TTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATA 66269 ||||| || || || || | |||||| || ||||| || | || | | ||| |||| Sbjct 126423 TTGTTGCCACCTTGGTCGACGTATCTGGCAGTGTTGTTGAAGACACGTAGCATGGGAACG 126482 Query 66270 ATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAAT--ATTAC 66327 ||||| ||||| | || || || || | || ||| || | |||||||| | Sbjct 126483 ATACCGTTGGAGTTTCCGTTCGTTCCCGCAATGTAGGCACCGGTAGCACGAATTCGGTGA 126542 Query 66328 TAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTAT 66387 |||| ||||| ||||| || || | || ||||| | ||||| || || |||| Sbjct 126543 ACATTG--AGACCGATTCCACCAGCATTCTTGGAGATCATGGCGCAAGTCTTCAATGTAT 126600 Query 66388 CATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGT 66447 | ||||| || || || ||||| || |||||| | || || || ||| | ||| Sbjct 126601 CGTAGATACCGTCAATGCTATCCTCTTTCATGTCGATAAGGAAGCATGAAGAGAGTTGTG 126660 Query 66448 GACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAA 66507 | || || || ||||| || || ||||| || || || || || | || | Sbjct 126661 CTTGTGGTGTACCGGCGGCGAATAAAGTTGGGGAAGCATGGGTGAAGCACTTCTGGGACA 126720 Query 66508 GTAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATGAATTCCTACTGCGACA 66566 | ||||| ||||| || || | || ||||| || | ||||| || || || || Sbjct 126721 TCAAGTTGTATGTCTCGATGGCAGCCTCAATATCTTCACCG-TGAATACCAACAGCCACT 126779 Query 66567 CGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGAT 66626 ||||| | ||| || || || | || |||||| || | | | ||| ||| Sbjct 126780 CGCATAATCATATGTTGTGGGCGCTCGCAGATCTTTCCGTCCAGGCGGAGGAGGTATGAT 126839 Query 66627 TTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACC 66686 || | ||| || || || || || | ||| ||||| || || || | |||| | Sbjct 126840 CGCTCGAGAGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCCCGGTCATAGACAATAGCG 126899 Query 66687 GAGTTGAG 66694 |||||||| Sbjct 126900 GAGTTGAG 126907 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658171113432200