Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12- 03] 205 sequences; 69,693,031 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq124 179 5e-40 seq93 98.7 1e-15 >seq124 Length=198120 Score = 179 bits (198), Expect = 5e-40 Identities = 1123/1776 (63%), Gaps = 47/1776 (3%) Strand=Plus/Plus Query 78718 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 78777 ||||| ||||| ||||| || || | | ||||| || || ||||| || || || | Sbjct 125043 GTGAACTGAATAGGAGCTGAAGCAGCCATGGTACGGAGGTAATACATGCCAGTCTTCAAG 125102 Query 78778 CCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 78837 || | |||| || ||| ||||| || || | ||| | |||||| ||| Sbjct 125103 CCCAACTTCCAGCCAGCGAAGTGCATGCTGGTGATCTTGCCCATTGTGGGATCTTTCATA 125162 Query 78838 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 78897 ||||| ||||| |||||| |||||||||| | || || | ||| || ||||| | | | Sbjct 125163 TGGATGTTCATCGATTGAGATTGATCGATGTAAGCACCACGGTCAGCGGCCATCTGGACG 125222 Query 78898 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 78957 || || ||| | || ||||| | || || || | ||| || || |||| | | Sbjct 125223 ATTGTTCGTTGAGAGATCTCCCAGACGGTCTTGTAGAGAGCCTTGATGTCAGCTGGGATG 125282 Query 78958 TTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTC 79014 || | | ||||| || || |||||||| || || || | ||||| || | ||| | Sbjct 125283 TTGGGAATGTTCTGGATAGAACCACCATCGGCGATGATGCGGTTCTTCATGTTGTCAGAC 125342 Query 79015 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 79074 |||| | ||| | | | | ||||| || || || || || ||||| ||| Sbjct 125343 CATAGACCCATATCGACGAGATCCTTCAGGAGCCATGGGTTGACGACCTGGAATTCACCA 125402 Query 79075 GACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCCC 79134 | | || | |||| ||| || || || ||||| || | | || || || Sbjct 125403 GCAAGAACACGACGAGAGTAGATGTTGGATGTGTATGGCTCGAAGCACTCGTTGAAGCCG 125462 Query 79135 AAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 79194 | ||||||| || || |||||||| || || || | || || || | || |||| Sbjct 125463 AGAATTTGACTGGTACTGGCAGTTGGCATGGGAGCAACGAGCAAGCTGTTGCGAACACCG 125522 Query 79195 TA-TGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACATT 79253 | || | |||| | | || | | ||||| ||||| || || | || ||| Sbjct 125523 TGCTGCT-TGATCTGCTGCTTCAAGGTATCCCAGTCCCAGAGGTCGGTAGGAGTGACACC 125581 Query 79254 CCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATGTTTCATAAGG 79313 ||| | ||||| || || ||| || || ||| ||| |||||| || || || Sbjct 125582 CCACATGTCATACTGAAGCTCACCCTTGGAGACGGGTGAACCTTCGTATGTCTCGTATGG 125641 Query 79314 TCCTT---CCTTTTCGGCTAATTCACAACTC--GCCTCTAATGCTCCGTAATAAATGGTT 79368 ||| | |||| ||| | ||| ||| | | || ||| |||||||| Sbjct 125642 TCCGTGAACCTT---GGCAAGCTCA--ACTGAAGAAGTGAGAGCGGCGTGGTAAATGGTC 125696 Query 79369 TCGAAAATCTTCTTATTGAGAT-CTTGTGCTTCTAGGCTA-TCAAATGGATAATTTAAGA 79426 ||||| |||| | ||||| | |||| || || ||| | || |||||| | ||| Sbjct 125697 TCGAAGATCTGGATGTTGAGGTGCTTG-GCCTC-AGGAGAGTCGAATGGA-AGGCGGAGA 125753 Query 79427 G--AATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATT 79484 | || ||| || || || | ||||| ||||| | | | ||||||| || | || Sbjct 125754 GCCAAGAAA-GCATCAGCAAGACCTTGGACACCGACAGCAATAGGTCGGTGACGGAAGTT 125812 Query 79485 AGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCT 79544 | | || || || | ||| || || || | ||| || || || || || ||| | Sbjct 125813 GCTCTTCTTGGCCTCGGGGACAGGGTAGTAGTTGACATCAATGATCTTGTTCAGGTTCTT 125872 Query 79545 GACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCGTCCATC-----TATT 79599 ||| | || | | || || | || || ||| || | ||||| | || Sbjct 125873 GACGACAACCTGGCAGACTTCGTGGAGCTTCGCAAAGTCGTAGGTACCATCGTTGGTGTT 125932 Query 79600 -ACAAACATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGC 79658 || | || | || | || |||| || ||||| || ||||||| || | | Sbjct 125933 GACGTAGGTGGGGAGAGCAAGGGAAGCCAAGTTGCAAACAGCGACCTCATCAGGAGCACA 125992 Query 79659 ATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATT 79718 || | | || |||||||||||||| | ||| || || | || | || || Sbjct 125993 GTACTCCACAATCTCAGTGCAGAGGTTGGAGCTTCGAATTGTGCCGAGGTTCTTCTGGTT 126052 Query 79719 ACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGA 79778 |||||| | || || |||||||| || || ||||| ||| | ||||| || |||| | Sbjct 126053 GCTCTTTCTATTGCAAGCATCCTTGTAGAGCATGAATGGATTCCCAGTCTCGGTCTGTGC 126112 Query 79779 TTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTATTATAGACTTGTATCTCTT---TT 79834 || | || | | ||| | | || | ||||| || | |||| | ||| || Sbjct 126113 CTCCAAGATGGAGTACCAAA-GTTTCTGTGCCTTGATGGT---CTTGCGACCCTTGCCTT 126168 Query 79835 CTCTTTCGTA-TTGT-GTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCC 79892 | | ||||| || | ||||| | | |||||||| || || | ||||| | || || Sbjct 126169 CACGCTCGTACTTCTCGTATAGAGCC--TCGAACTCATCACCATAGACATCAGCCAAGCC 126226 Query 79893 AGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAA 79952 || || |||| || |||||||| | ||||||||||| | || || || ||||| || Sbjct 126227 TGGGCACTCGTTGGGGCACATCAAAGTCCACTCTCCATTCTTCTCAACACGCTTCATGAA 126286 Query 79953 GAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGT 80012 ||||||||| ||||| | || || ||||| | | || ||||| || || Sbjct 126287 GAGATCAGGGATCCACAAGGCGTAGAAGAGATCACGAGCTCGGACTTCCTCTTTGCCGTG 126346 Query 80013 ATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGC 80072 |||||| ||||| ||| || | | | ||| | ||||| || || | ||| ||||| Sbjct 126347 GTTCTTTCGGAGATCAAGGTACTCGAAGACATCTGCGTGCCATGGCTCGAGGTAGATGGC 126406 Query 80073 CATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAAC 80132 | | | || |||| ||||| || || || || | |||||| || ||||| || | || Sbjct 126407 GAAAGCACCTGGTCTCTTGTTGCCACCTTGGTCGACGTATCTGGCAGTGTTGTTGAAGAC 126466 Query 80133 TCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACT 80192 | | ||| |||| ||||| ||||| | || || || || | || ||| || | Sbjct 126467 ACGTAGCATGGGAACGATACCGTTGGAGTTTCCGTTCGTTCCCGCAATGTAGGCACCGGT 126526 Query 80193 GGCACGAAT--ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCG 80250 |||||||| | |||| ||||| ||||| || || | || ||||| | ||| Sbjct 126527 AGCACGAATTCGGTGAACATTG--AGACCGATTCCACCAGCATTCTTGGAGATCATGGCG 126584 Query 80251 CATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAA 80310 || || || ||||| ||||| || || |||||||| || |||||| | || || Sbjct 126585 CAAGTCTTCAATGTATCGTAGATACCGTCAATGCTATCCTCTTTCATGTCGATAAGGAAG 126644 Query 80311 CAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTA 80370 || ||| | ||| | || || || ||||| || || ||||| || || Sbjct 126645 CATGAAGAGAGTTGTGCTTGTGGTGTACCGGCGGCGAATAAAGTTGGGGAAGCATGGGTG 126704 Query 80371 AACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATC-CCATTGATG 80429 || || || | |||| | ||||| ||||| || || | || ||||| || | || Sbjct 126705 AAGCACTTCTGGGACATCAAGTTGTATGTCTCGATGGCAGCCTCAATATCTTCACCG-TG 126763 Query 80430 AATTCCTACCGCGACACGCATTAACATGTGCTGAGG 80465 ||| || || || || ||||| | ||| || || || Sbjct 126764 AATACCAACAGCCACTCGCATAATCATATGTTGTGG 126799 >seq93 Length=1762202 Score = 98.7 bits (108), Expect = 1e-15 Identities = 332/514 (65%), Gaps = 5/514 (1%) Strand=Plus/Minus Query 49668 TTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATT 49727 ||||||||| ||||| ||||| || ||||| || || || ||||| | | ||| || || Sbjct 1532406 TTTTTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTTCCGGCAAGTGAGATGTT 1532347 Query 49728 TTCCATGAAATCAAACGGATTGG-TAACATTATAAAtttttttAAATCCCAATTCAGAAA 49786 |||||||| || || || |||| | || || || | || | || | || || Sbjct 1532346 CTCCATGAAGTCGAATGGGTTGGCTGAC-TTGTAGACCTTCTCGTTGCCAAGAGCAACAA 1532288 Query 49787 TCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAA 49846 | | ||| || || || || || ||| ||||| | | | ||||| || | | Sbjct 1532287 GGAGACGATCAGCAACGAACTCGATGTATTGCTTCATGAGGTTGGAGTTCATGCCGAGGA 1532228 Query 49847 GTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAA 49906 || ||||||||| | || | || || || ||||| || || || || || | Sbjct 1532227 GTGCGCAAGGAAGAGCCTCGGTCAAGAACTCCTGCTCAATCTCAACAGCCTCGGTAATGA 1532168 Query 49907 TAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGA 49966 | |||| || | || || | ||| ||||| || | | || || | Sbjct 1532167 CGTCTTGGACGGCTTGCTTGCTTGGGCGGTGCTTCAAATGAGAGAAGAGAAGGCAAGCAA 1532108 Query 49967 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCA 50026 | ||| ||| ||||||||||| | | || |||||||| || || || || || | || Sbjct 1532107 AGTCGGTGTGAAGACCCTCGTCACGAGAGATAAGTTCGTTAGAGAAAGTCAGACCAGCCA 1532048 Query 50027 TTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTT 50086 | || |||||||| || | ||| || || || || || || ||| |||||||| || | Sbjct 1532047 TGAGACCACGCTTCTTTAACCAGAAGATAGATGCGAACGATCCACTGAAGAAGATACCCT 1531988 Query 50087 CTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGC---TGTCATGTATCCACT 50143 | || ||||| || || || || | | || | | | || |||| || ||||| Sbjct 1531987 CGACAGCGGCGAATGCGACGAGACGTTGAGCAAAGGTAGAGCTCTTGTCTTGGATCCATC 1531928 Query 50144 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 50177 | |||||| ||||||||||| || | ||||| Sbjct 1531927 TGACAGCCCAGTCGGCCTTCTTCTTGATGCAAGG 1531894 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718266959436200