Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12- 03] 205 sequences; 69,693,031 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq124 138 2e-27 >seq124 Length=198120 Score = 138 bits (152), Expect = 2e-27 Identities = 554/860 (64%), Gaps = 18/860 (2%) Strand=Plus/Plus Query 71698 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCA 71757 |||| || |||| || ||||| || ||||||| || | | || | | ||| ||| Sbjct 125949 GCAAGGGAAGCCAAGTTGCAAACAGCGACCTCATCAGGAGCACAGTACTCCACAATCTCA 126008 Query 71758 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 71817 ||||| || || | || || || | || | || || |||||| | || || Sbjct 126009 GTGCAGAGGTTGGAGCTTCGAATTGTGCCGAGGTTCTTCTGGTTGCTCTTTCTATTGCAA 126068 Query 71818 GCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 71877 |||||||| || || || || ||| | ||||| || |||| | || | || | | | Sbjct 126069 GCATCCTTGTAGAGCATGAATGGATTCCCAGTCTCGGTCTGTGCCTCCAAGATGGAGTAC 126128 Query 71878 CAGACGACTC-GAGCCTTTATTATATTCTTGTATCTCTT---TTCTCTTTCGTA-TTGT- 71931 || | | || | ||||| || | |||| | ||| ||| | ||||| || | Sbjct 126129 CAAA-GTTTCTGTGCCTTGATGGT---CTTGCGACCCTTGCCTTCACGCTCGTACTTCTC 126184 Query 71932 GTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGA 71991 ||||| | | |||||||| || || | ||| | || || || || || || || Sbjct 126185 GTATAGAGCC--TCGAACTCATCACCATAGACATCAGCCAAGCCTGGGCACTCGTTGGGG 126242 Query 71992 CACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAA 72051 |||||||| | ||||||||||| | | || || ||||| ||||||||||| ||||| Sbjct 126243 CACATCAAAGTCCACTCTCCATTCTTCTCAACACGCTTCATGAAGAGATCAGGGATCCAC 126302 Query 72052 AGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCG 72111 | || || ||||| | | || ||||| || || |||||| ||||| Sbjct 126303 AAGGCGTAGAAGAGATCACGAGCTCGGACTTCCTCTTTGCCGTGGTTCTTTCGGAGATCA 126362 Query 72112 AGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGT 72171 ||| || | | | ||| | ||||| || || | ||| ||||| | | | || || | Sbjct 126363 AGGTACTCGAAGACATCTGCGTGCCATGGCTCGAGGTAGATGGCGAAAGCACCTGGTCTC 126422 Query 72172 TTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATA 72231 ||||| || || || || | |||||| || ||||| || | || | | ||| |||| Sbjct 126423 TTGTTGCCACCTTGGTCGACGTATCTGGCAGTGTTGTTGAAGACACGTAGCATGGGAACG 126482 Query 72232 ATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTGC 72289 ||||| ||||| || || || || | || ||| || | |||||||| || Sbjct 126483 ATACCGTTGGAGTTTCCGTTCGTTCCCGCAATGTAGGCACCGGTAGCACGAATTCGGTGA 126542 Query 72290 TAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTAT 72349 |||| ||||| ||||| || || | || ||||| | ||||| || || |||| Sbjct 126543 ACATTG--AGACCGATTCCACCAGCATTCTTGGAGATCATGGCGCAAGTCTTCAATGTAT 126600 Query 72350 CATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGT 72409 | ||||| || || || ||||| || |||||| | || || || ||| | ||| Sbjct 126601 CGTAGATACCGTCAATGCTATCCTCTTTCATGTCGATAAGGAAGCATGAAGAGAGTTGTG 126660 Query 72410 GACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACA 72469 | || || || ||||| || || ||||| || || || || || | |||| Sbjct 126661 CTTGTGGTGTACCGGCGGCGAATAAAGTTGGGGAAGCATGGGTGAAGCACTTCTGGGACA 126720 Query 72470 GTAGATTGTACGTCTCAATAGCTGATTCTATATC-CCATTGATGTATTCCTACCGCGACA 72528 | ||||| ||||| || || | || ||||| || | || || || || || || Sbjct 126721 TCAAGTTGTATGTCTCGATGGCAGCCTCAATATCTTCACCG-TGAATACCAACAGCCACT 126779 Query 72529 CGCATTAACATATGCTGAGG 72548 ||||| | |||||| || || Sbjct 126780 CGCATAATCATATGTTGTGG 126799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671137480205800