Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12-
03] 205 sequences; 69,693,031 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq93 118 2e-21
seq124 109 8e-19
>seq93
Length=1762202
Score = 118 bits (130), Expect = 2e-21
Identities = 205/290 (71%), Gaps = 6/290 (2%)
Strand=Plus/Plus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| | |||||||| ||||| |||| || || ||||| | |||||| | ||||||
Sbjct 1531509 ATCTGGCAGATGTACAAGAAGGCCGAGGCATCTTTCTGGACCGCAGAAGAGATTGATCTG 1531568
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
|| ||||| || |||| ||| | | | | ||| |||||| | || || ||
Sbjct 1531569 TCGAAGGATCTCCACGACTGGAACAACAAGCTCAATGACGATGAGCGTTACTTCATCTCA 1531628
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATC-TGTTGACACG 125197
||| || | || ||||| |||| || ||||||||||||||||| || | ||| || ||
Sbjct 1531629 CACGTTCTTGCATTCTTCGCCGCTTCAGATGGAATCGTCAACGAGAACCTTGTCGA-GCG 1531687
Query 125198 ATTCTCTCAAG-AGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATG 125255
|| | | |||| | || || |||| ||| ||||| ||||| ||||| ||||||
Sbjct 1531688 CTTTAGTGGTGAAGTTCA-GATCCCCGAGG-CTCGCTGCTTCTACGGCTTCCAGATCATG 1531745
Query 125256 ATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACAT 125305
|| |||||| | || || || | ||||||| || || |||| |||||
Sbjct 1531746 ATGGAGAACATTCATTCCGAGACGTACTCTCTCCTCATCGACACATACAT 1531795
Score = 93.3 bits (102), Expect = 6e-14
Identities = 291/438 (66%), Gaps = 27/438 (6%)
Strand=Plus/Plus
Query 125427 CTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTT 125486
|| || ||||||||||| || ||||| |||||||| || || || | |||||
Sbjct 1531966 CTCGTCGCATTCGCCGCTGTCGAGGGTATCTTCTTCAGTGGATCGTTCGCATCTATCTTC 1532025
Query 125487 TGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGA 125546
||| | |||||||| || |||||| | || ||||| | |||||| |||| |||||
Sbjct 1532026 TGGTTAAAGAAGCGTGGTCTCATGGCTGGTCTGACTTTCTCTAACGAACTTATCTCTCGT 1532085
Query 125547 GACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT--ATCTGCGTCCC 125603
|||||||| || ||| |||||||| || || || || || | | | || |||
Sbjct 1532086 GACGAGGGTCTTCACACCGACTTTGCTTGCCTTCTCTTCTCTCATTTGAAGCACCG-CCC 1532144
Query 125604 GAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAA 125663
| ||| | | ||| | || | | ||| | ||||| || || ||| ||
Sbjct 1532145 AA--GCA-AGCAAGCCGTCCAA--GACGTCA------TTACCGAGGCTGTTGAGATTGAG 1532193
Query 125664 CAAGAGTTTCTAACCGAATCCCTACCGGTCAGCA-TGATTGGCATGAACTGCAAGCTAAT 125722
|| ||||| | ||||| | || || | ||| | | |||||||||| ||| || ||
Sbjct 1532194 CAGGAGTTCTTGACCGAGGCTCTTCC-TTGCGCACTCCTCGGCATGAACTCCAACCTCAT 1532252
Query 125723 GTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTG--ATTGGC--CG-C 125777
| | ||||| ||||| || || |||||||| || |||| ||||| ||
Sbjct 1532253 GAAGCAATACATCGAGTTCGTTGCTGATCGTCTCCT-----TGTTGCTCTTGGCAACGAG 1532307
Query 125778 AAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAG 125837
||| | ||||| | || || || || |||||| | ||| ||||| | || |||
Sbjct 1532308 AAGGTCTACAAGTCAGCCAACCCATTCGACTTCATGGAGAACATCTCACTTGCCGGAAAG 1532367
Query 125838 ACCAACTTTTTCGAGAAG 125855
|||||||| |||||||||
Sbjct 1532368 ACCAACTTCTTCGAGAAG 1532385
>seq124
Length=198120
Score = 109 bits (120), Expect = 8e-19
Identities = 353/543 (65%), Gaps = 4/543 (1%)
Strand=Plus/Minus
Query 96806 AACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATG-CAATGTCAC 96864
||| ||||| ||| ||| || | || || ||||| | | | ||| || || ||
Sbjct 126506 AACGAACGGAAACTCCAACGGTATCGTTCCCATGCTACGTGTCTTCAACAACACTGCCA- 126448
Query 96865 GATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTT 96924
||||||| || || ||||| || | ||||| ||| | ||| ||||| | || || |
Sbjct 126447 GATACGTCGACCAAGGTGGCAACAAGAGACCAGGTGCTTTCGCCATCTACCTCGAGCCAT 126388
Query 96925 GGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCAC 96984
||||||| || || || || | | || | || || ||| ||| || || | |
Sbjct 126387 GGCACGCAGATGTCTTCGAGTACCTTGATCTCCGAAAGAACCACGGCAAAGAGGAAGTCC 126328
Query 96985 GAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACG 97044
|||| | || | || || || | ||| | || ||| | ||||||||||| || |
Sbjct 126327 GAGCTCGTGATCTCTTCTACGCCTTGTGGATCCCTGATCTCTTCATGAAGCGTGTTGAGA 126268
Query 97045 ACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGG 97104
| ||| | |||| | ||||||||| || || || || || | ||| || |
Sbjct 126267 AGAATGGAGAGTGGACTTTGATGTGCCCCAACGAGTGCCCAGGCTTGGCTGATGTCTATG 126208
Query 97105 GCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCC-GATACGTGAGACGA 97163
| || ||||| ||||| ||| | ||||||| || ||| | || |||| |
Sbjct 126207 GTGATGAGTTCGAGGCTCTATACGAGAAGTACGAGCGTGAAGGCAAGGGTCGCAAGACCA 126148
Query 97164 GTCGATGCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCG 97223
|| | |||| |||| ||| | ||||| || ||| ||| |||||||| | |||
Sbjct 126147 -TCAAGGCACAGAAACTTTGGTACTCCATCTTGGAGGCACAGACCGAGACTGGGAATCCA 126089
Query 97224 TACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATC 97283
| ||| |||||||||||| | ||| | || |||||||| || | ||||| ||
Sbjct 126088 TTCATGCTCTACAAGGATGCTTGCAATAGAAAGAGCAACCAGAAGAACCTCGGCACAATT 126029
Query 97284 AAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTT 97343
||||||| || ||||| || ||||| |||||| |||| || ||| || |||
Sbjct 126028 CGAAGCTCCAACCTCTGCACTGAGATTGTGGAGTACTGTGCTCCTGATGAGGTCGCTGTT 125969
Query 97344 TGC 97346
|||
Sbjct 125968 TGC 125966
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741057301035800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |