Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12-
03] 205 sequences; 69,693,031 total letters
Query= NC_004690.1
Length=113220
Score E
Sequences producing significant alignments: (Bits) Value
seq93 104 2e-17
seq99 84.2 2e-11
>seq93
Length=1762202
Score = 104 bits (114), Expect = 2e-17
Identities = 131/180 (73%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219
||| || ||||| ||||| || || || ||||| ||| | | ||||||| | ||
Sbjct 805803 ATGGAGAGTGGACTCTTTCTGGATATTATAATCCGAAAGAGTGCGGCCGTCTTCAAGCTG 805744
Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT 15279
|| |||||| | ||||| |||||||||||| ||||| || || ||||| ||| ||
Sbjct 805743 CTTTCCAGCGAAGATCAAGCGTTGTTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTT 805684
Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339
|||||||||| | || ||||||||||| || || || | ||| ||||| || || ||
Sbjct 805683 GCTCTTTACATTATCGATGGTATCGCTGGACTCAACCTCGAGGGTGATGGTCTTGCCAGT 805624
Score = 89.7 bits (98), Expect = 4e-13
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219
||| |||||||| || || || || ||||| ||| || ||| | ||||| | |||
Sbjct 806086 ATGGAGGGTGGACTCCTTCTGGATATTGTAGTCGGAGAGGGTTCGTCCATCTTCGAGTTG 806027
Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT 15279
||||||||| | |||| |||||||||||| || || ||||| ||||| || ||
Sbjct 806026 CTTGCCAGCGAAGATCAGGCGTTGTTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTT 805967
Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339
||| || | || ||||| ||| |||||| || | ||| ||||| || || ||
Sbjct 805966 CGACTTAACGTTGTCGATGGTGTCGGAGGATTCTACCTCCAGGGTGATGGTCTTTCCAGT 805907
Query 15340 CAGAGTTTTTACAA 15353
||| || || ||||
Sbjct 805906 CAGGGTCTTGACAA 805893
>seq99
Length=1752785
Score = 84.2 bits (92), Expect = 2e-11
Identities = 126/179 (70%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 15176 TTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATC 15235
||||| |||||||||||||| || | | | || || | ||| ||||||||| | |||
Sbjct 456626 TTTTGGATGTTGTAATCGCTCAGGGTACGGCCATCCTCGAGTTGCTTGCCAGCGAAGATC 456567
Query 15236 AAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCT 15295
| |||||||||||| ||| |||||||| ||||| || ||| ||| || | ||
Sbjct 456566 AGGCGTTGTTGGTCGGGTGGGATTCCTTCCTTGTCCTGGATCTTGGACTTGACGTTGTCG 456507
Query 15296 ATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAA 15354
|| || ||||| || || || | ||| || || || || || || || || || ||
Sbjct 456506 ATAGTGTCGCTCGACTCCACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTAACGAA 456448
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 362178295117905
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |