Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12-
03] 205 sequences; 69,693,031 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq93 127 5e-24
seq62 102 2e-16
>seq93
Length=1762202
Score = 127 bits (140), Expect = 5e-24
Identities = 143/189 (76%), Gaps = 2/189 (1%)
Strand=Plus/Minus
Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407
|| || ||||| | || || |||||||| |||||||| || || ||||| | ||||||
Sbjct 805811 AGGACGAGATGGAGAGTGGACTCTTTCTGGATATTATAATCCGAAAGAGTGCGGCCGTCT 805752
Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467
|| || || |||||||| || || | | ||||| || || || || || || || |||
Sbjct 805751 TCAAGCTGCTTTCCAGCGAAGATCAAGCGTTGTTGGTCGGGGGGAATGCCCTCCTTGTCC 805692
Query 104468 TGAATCTTTGCT-TTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526
|||||| ||||| |||||||| || | ||||||||| | || ||||| || || || ||
Sbjct 805691 TGAATC-TTGCTCTTTACATTATCGATGGTATCGCTGGACTCAACCTCGAGGGTGATGGT 805633
Query 104527 CTTACCAGT 104535
||| |||||
Sbjct 805632 CTTGCCAGT 805624
Score = 98.7 bits (108), Expect = 2e-15
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || ||||||||||| ||||| || || ||||| || || || | ||| || ||
Sbjct 806307 GTGGACTCCTTCTGAATATTGTAGTCTGACAGGGTTCTGCCATCCTCCAATTGCTTACCG 806248
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| || || || | || ||||| || || || || || ||||| |||||||| | ||
Sbjct 806247 GCGAAGATAAGACGTTGCTGATCGGGTGGGATACCCTCCTTATCTTGAATCTTCGACTTA 806188
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|| || || | || ||| | ||| ||||| || || || ||||| || || | ||
Sbjct 806187 ACGTTGTCGATTGTGTCGGATGATTCAACCTCAAGAGTGATGGTCTTTCCGGTCAAGGTC 806128
Query 104543 TTTACAAATATCTGCAT 104559
|| || || ||||||||
Sbjct 806127 TTGACGAAGATCTGCAT 806111
Score = 95.1 bits (104), Expect = 3e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || || ||||| || ||||| | || | ||| || || | ||| || |||
Sbjct 806535 GTTGACTCCTTTTGAATGTTGTAGTCGCTCAAGGTACGACCATCCTCCAATTGCTTACCA 806476
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || | | ||| || ||||| || || || || |||||||||||||||| ||
Sbjct 806475 GCAAAGATCAATCGCTGCTGGTCAGGTGGAATACCCTCCTTATCCTGAATCTTTGACTTG 806416
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | ||| || | || || || | ||| || ||||| ||||| | ||
Sbjct 806415 ACATTGTCAATGGTGTCTGACGACTCCACTTCCAATGTGATTGTCTTGCCAGTCAAAGTC 806356
Query 104543 TTTACAAATATCTGCAT 104559
|| ||||| ||||||||
Sbjct 806355 TTGACAAAGATCTGCAT 806339
>seq62
Length=1271336
Score = 102 bits (112), Expect = 2e-16
Identities = 130/179 (73%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 104372 TTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATT 104431
|||||||| || ||||| || || || | || || || ||||| ||||||||||| ||
Sbjct 898283 TTCTGAATGTTGTAGTCCGAAAGGGTGCGGCCATCCTCAAGTTGCTTTCCAGCAAAGATC 898342
Query 104432 AGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCT 104491
| | ||| || || || || ||||| || || ||||| ||||| | || || || ||
Sbjct 898343 AATCGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCG 898402
Query 104492 ACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAA 104550
| |||||||| | || ||||| || || || ||||| || ||||| || || || ||
Sbjct 898403 ATCGTATCGCTGGACTCGACCTCAAGAGTGATGGTCTTGCCCGTAAGGGTCTTGACGAA 898461
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151395375780140
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |