Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12-
03] 205 sequences; 69,693,031 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq93 111 1e-19
>seq93
Length=1762202
Score = 111 bits (122), Expect = 1e-19
Identities = 155/214 (72%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCC 94855
|||||| || | ||| || |||||||| | ||| || ||||||| || || || ||||
Sbjct 806548 CACCAAATGGAGAGTTGACTCCTTTTGAATGTTGTAGTCGCTCA-AG-GTACGACCATCC 806491
Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCA 94915
|||| || || || ||||||| |||| ||||| || || |||||||| || || ||
Sbjct 806490 TCCAATTGCTTACCAGCAAAGATCAATCGCTGCTGGTCAGGTGGAATACCCTCCTTATCC 806431
Query 94916 TAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTT 94975
| ||| |||| |||||| | | | ||||| | || || || | ||||| ||
Sbjct 806430 TGAATCTTTGACTTGACATTGTCAATGGTGTCTGACGACTCCACTTCCAATGTGATTGTC 806371
Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009
|| ||||| | ||| || ||||||||||||||||
Sbjct 806370 TTGCCAGTCAAAGTCTTGACAAAGATCTGCATGC 806337
Score = 89.7 bits (98), Expect = 5e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858
|||||||||| || || ||||| || | || || || || || || |||||||
Sbjct 806319 ACCAAGTGCAGGGTGGACTCCTTCTGAATATTGTAGTCTGACAGGGTTCTGCCATCCTCC 806260
Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918
| || || ||| | ||||| | | ||||||||| || || ||||| || || || | |
Sbjct 806259 AATTGCTTACCGGCGAAGATAAGACGTTGCTGATCGGGTGGGATACCCTCCTTATCTTGA 806200
Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978
|| || | ||| ||| | ||| ||||| | || || |||| |||||||| |||
Sbjct 806199 ATCTTCGACTTAACGTTGTCGATTGTGTCGGATGATTCAACCTCAAGAGTGATGGTCTTT 806140
Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || | || || || |||||||||||
Sbjct 806139 CCGGTCAAGGTCTTGACGAAGATCTGCAT 806111
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448290051253800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |