Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12- 03] 205 sequences; 69,693,031 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq35 116 6e-22 seq67 86.0 1e-12 >seq35 Length=201966 Score = 116 bits (128), Expect = 6e-22 Identities = 142/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 16512 GTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCT 16571 |||| ||||||||| |||| | || |||| ||||||| || | ||| | |||| || Sbjct 90086 GTGGTGTCAAGCGTATCTCAGCCATGATCTACGAAGAGACCCGCGGTGTCCTCAAGACCT 90027 Query 16572 TCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTG 16631 ||||| || || |||| ||| ||| || ||| ||||| ||||| || | ||||||| Sbjct 90026 TCCTCGAGGGTGTCATCCGTGACGCTGTCACCTACACCGAACACGCCAAGAGAAAGACTG 89967 Query 16632 TCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTG 16691 |||||||| | ||| | ||||| || | || || |||||||||| |||| ||||| | Sbjct 89966 TCACCTCCCTCGATGTTGTCTACGCCCTCAAGCGCCAAGGCCGTACCCTTTACGGTTTCG 89907 Query 16692 GAAGTTAATCTTCT 16705 | | ||| | ||| Sbjct 89906 GTGGCTAAGCGTCT 89893 Score = 80.6 bits (88), Expect = 4e-11 Identities = 68/81 (84%), Gaps = 2/81 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||| | ||||||| ||| |||||| || |||||||| || || || ||||| ||||| Sbjct 90217 GCCAAGAGACATCGCAAGAT-TCTTCGTGACAACATCCAGGGTATTACAAAGCCTGCTAT 90159 Query 16492 CCGTCGTCTGGCTCGTCGTGG 16512 ||||||||| ||||||||||| Sbjct 90158 CCGTCGTCTCGCTCGTCGTGG 90138 >seq67 Length=3716956 Score = 86.0 bits (94), Expect = 1e-12 Identities = 69/81 (85%), Gaps = 2/81 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||| | ||||||| ||| |||||| || ||||||||||| ||||| ||||| || || Sbjct 2633631 GCCAAGAGACATCGCAAGAT-TCTTCGTGACAACATCCAAGGTATCACAAAGCCTGCCAT 2633573 Query 16492 CCGTCGTCTGGCTCGTCGTGG 16512 ||||||||| ||||||||||| Sbjct 2633572 CCGTCGTCTTGCTCGTCGTGG 2633552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075012567065