Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12-
03] 205 sequences; 69,693,031 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq35 116 6e-22
seq67 86.0 1e-12
>seq35
Length=201966
Score = 116 bits (128), Expect = 6e-22
Identities = 142/194 (73%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 16512 GTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCT 16571
|||| ||||||||| |||| | || |||| ||||||| || | ||| | |||| ||
Sbjct 90086 GTGGTGTCAAGCGTATCTCAGCCATGATCTACGAAGAGACCCGCGGTGTCCTCAAGACCT 90027
Query 16572 TCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTG 16631
||||| || || |||| ||| ||| || ||| ||||| ||||| || | |||||||
Sbjct 90026 TCCTCGAGGGTGTCATCCGTGACGCTGTCACCTACACCGAACACGCCAAGAGAAAGACTG 89967
Query 16632 TCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTG 16691
|||||||| | ||| | ||||| || | || || |||||||||| |||| ||||| |
Sbjct 89966 TCACCTCCCTCGATGTTGTCTACGCCCTCAAGCGCCAAGGCCGTACCCTTTACGGTTTCG 89907
Query 16692 GAAGTTAATCTTCT 16705
| | ||| | |||
Sbjct 89906 GTGGCTAAGCGTCT 89893
Score = 80.6 bits (88), Expect = 4e-11
Identities = 68/81 (84%), Gaps = 2/81 (2%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| ||| | ||||||| ||| |||||| || |||||||| || || || ||||| |||||
Sbjct 90217 GCCAAGAGACATCGCAAGAT-TCTTCGTGACAACATCCAGGGTATTACAAAGCCTGCTAT 90159
Query 16492 CCGTCGTCTGGCTCGTCGTGG 16512
||||||||| |||||||||||
Sbjct 90158 CCGTCGTCTCGCTCGTCGTGG 90138
>seq67
Length=3716956
Score = 86.0 bits (94), Expect = 1e-12
Identities = 69/81 (85%), Gaps = 2/81 (2%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| ||| | ||||||| ||| |||||| || ||||||||||| ||||| ||||| || ||
Sbjct 2633631 GCCAAGAGACATCGCAAGAT-TCTTCGTGACAACATCCAAGGTATCACAAAGCCTGCCAT 2633573
Query 16492 CCGTCGTCTGGCTCGTCGTGG 16512
||||||||| |||||||||||
Sbjct 2633572 CCGTCGTCTTGCTCGTCGTGG 2633552
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075012567065
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |