Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12-
03] 205 sequences; 69,693,031 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq124 145 1e-29
seq93 98.7 1e-15
>seq124
Length=198120
Score = 145 bits (160), Expect = 1e-29
Identities = 619/967 (64%), Gaps = 16/967 (2%)
Strand=Plus/Plus
Query 62892 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 62951
|||| || |||| || ||||| || ||||||| || | | || | | ||||||
Sbjct 125949 GCAAGGGAAGCCAAGTTGCAAACAGCGACCTCATCAGGAGCACAGTACTCCACAATCTCA 126008
Query 62952 GTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 63011
||||| || || | || || || | || | || || |||||| | || ||
Sbjct 126009 GTGCAGAGGTTGGAGCTTCGAATTGTGCCGAGGTTCTTCTGGTTGCTCTTTCTATTGCAA 126068
Query 63012 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 63071
|||||||| || || ||||||||| | ||||| || |||| | || | || | | |
Sbjct 126069 GCATCCTTGTAGAGCATGAATGGATTCCCAGTCTCGGTCTGTGCCTCCAAGATGGAGTAC 126128
Query 63072 CAGACGACTC-GAGCCTTTATTATAGATTTGTATC--TCCTTTCTCTTTCGTA--TAGTG 63126
|| | | || | ||||| || | || | | | | ||| | ||||| | |
Sbjct 126129 CAAA-GTTTCTGTGCCTTGATGGTC--TTGCGACCCTTGCCTTCACGCTCGTACTTCTCG 126185
Query 63127 TATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGAC 63186
|||| | | |||||||| || || | |||| |||| || || || || | || |
Sbjct 126186 TATAGAGCC--TCGAACTCATCACCATAGACATCAGCCAAGCCTGGGCACTCGTTGGGGC 126243
Query 63187 ACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAA 63246
||||||| | ||||||||| | | || || || ||||| ||||||||||| ||||| |
Sbjct 126244 ACATCAAAGTCCACTCTCCATTCTTCTCAACACGCTTCATGAAGAGATCAGGGATCCACA 126303
Query 63247 GAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGA 63306
|| || ||||| | | || |||||| || || |||||| ||||| |
Sbjct 126304 AGGCGTAGAAGAGATCACGAGCTCGGACTTCCTCTTTGCCGTGGTTCTTTCGGAGATCAA 126363
Query 63307 GGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTT 63366
|| || | | | ||| | ||||| || || | ||| ||||| | | | || || | |
Sbjct 126364 GGTACTCGAAGACATCTGCGTGCCATGGCTCGAGGTAGATGGCGAAAGCACCTGGTCTCT 126423
Query 63367 TGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAA 63426
|||| || || || || | |||||| || ||||| || | || | | ||| |||| |
Sbjct 126424 TGTTGCCACCTTGGTCGACGTATCTGGCAGTGTTGTTGAAGACACGTAGCATGGGAACGA 126483
Query 63427 TACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAAT--ATTACT 63484
||||||| || | || || || || | || ||| || | |||||||| |
Sbjct 126484 TACCGTTGGAGTTTCCGTTCGTTCCCGCAATGTAGGCACCGGTAGCACGAATTCGGTGAA 126543
Query 63485 AATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTC 63544
|||| ||||| ||||| || || | || ||||| | ||||| || || || ||
Sbjct 126544 CATTG--AGACCGATTCCACCAGCATTCTTGGAGATCATGGCGCAAGTCTTCAATGTATC 126601
Query 63545 ATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTG 63604
|||||||| || |||||||| || |||||| | || || || ||| | |||
Sbjct 126602 GTAGATACCGTCAATGCTATCCTCTTTCATGTCGATAAGGAAGCATGAAGAGAGTTGTGC 126661
Query 63605 ACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAG 63664
| || || || ||||| || || ||||| || || || || || | || |
Sbjct 126662 TTGTGGTGTACCGGCGGCGAATAAAGTTGGGGAAGCATGGGTGAAGCACTTCTGGGACAT 126721
Query 63665 TAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATGAATTCCTACTGCGACAC 63723
| ||||| ||||| || || | || ||||| || | ||||| || || || || |
Sbjct 126722 CAAGTTGTATGTCTCGATGGCAGCCTCAATATCTTCACCG-TGAATACCAACAGCCACTC 126780
Query 63724 GCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATT 63783
|||| | ||| || || || | || |||||| || | | | ||| |||
Sbjct 126781 GCATAATCATATGTTGTGGGCGCTCGCAGATCTTTCCGTCCAGGCGGAGGAGGTATGATC 126840
Query 63784 TTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCG 63843
|| | ||| || || || || || | ||| ||||| || || || | |||| | |
Sbjct 126841 GCTCGAGAGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCCCGGTCATAGACAATAGCGG 126900
Query 63844 AGTTGAG 63850
|||||||
Sbjct 126901 AGTTGAG 126907
>seq93
Length=1762202
Score = 98.7 bits (108), Expect = 1e-15
Identities = 332/514 (65%), Gaps = 5/514 (1%)
Strand=Plus/Minus
Query 33012 TTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATT 33071
||||||||| ||||| ||||| || ||||| || || || ||||| | | ||| || ||
Sbjct 1532406 TTTTTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTTCCGGCAAGTGAGATGTT 1532347
Query 33072 TTCCATGAAATCAAACGGATTGG-TAACATTATAAAtttttttAAATCCCAATTCAGAAA 33130
|||||||| || || || |||| | || || || | || | || | || ||
Sbjct 1532346 CTCCATGAAGTCGAATGGGTTGGCTGAC-TTGTAGACCTTCTCGTTGCCAAGAGCAACAA 1532288
Query 33131 TCAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAA 33190
| | ||| || ||||| || || ||| ||||| | | | ||||| || | |
Sbjct 1532287 GGAGACGATCAGCAACGAACTCGATGTATTGCTTCATGAGGTTGGAGTTCATGCCGAGGA 1532228
Query 33191 GTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAA 33250
|| ||||||||| | || | || || || ||||| || || || || || |
Sbjct 1532227 GTGCGCAAGGAAGAGCCTCGGTCAAGAACTCCTGCTCAATCTCAACAGCCTCGGTAATGA 1532168
Query 33251 TAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGA 33310
| |||| || | || || | ||| ||||| || | | || || |
Sbjct 1532167 CGTCTTGGACGGCTTGCTTGCTTGGGCGGTGCTTCAAATGAGAGAAGAGAAGGCAAGCAA 1532108
Query 33311 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCA 33370
| ||| ||| ||||||||||| | | || |||||||| || || || || || | ||
Sbjct 1532107 AGTCGGTGTGAAGACCCTCGTCACGAGAGATAAGTTCGTTAGAGAAAGTCAGACCAGCCA 1532048
Query 33371 TTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTT 33430
| || |||||||| || | ||| || || || ||||| |||||| |||||||| || |
Sbjct 1532047 TGAGACCACGCTTCTTTAACCAGAAGATAGATGCGAACGATCCACTGAAGAAGATACCCT 1531988
Query 33431 CTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGC---TGTCATGTATCCACT 33487
| || || || || || | || | | || | | || |||| || |||||
Sbjct 1531987 CGACAGCGGCGAATGCGACGAGACGTTGAGCAAAGGTAGAGCTCTTGTCTTGGATCCATC 1531928
Query 33488 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 33521
| |||||| ||||||||||| || | |||||
Sbjct 1531927 TGACAGCCCAGTCGGCCTTCTTCTTGATGCAAGG 1531894
Score = 91.5 bits (100), Expect = 2e-13
Identities = 193/285 (68%), Gaps = 5/285 (2%)
Strand=Plus/Minus
Query 33574 TAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAAT 33633
|| || ||||| | ||| ||| | || ||||||||||| || || ||||| ||
Sbjct 1531792 TATGTGTCGATGAGGAGAGAGTACGTCTCGGAATGAATGTTCTCCATCATGATCTGGAAG 1531733
Query 33634 CCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTT 33693
|||||||| || | |||||||| ||||| ||||| || ||| || || | | ||
Sbjct 1531732 CCGTAGAAGCAGCGAGCCTCGGGGATCTGAACTTCACCACTAAAGCGCTCGACAAGGTTC 1531673
Query 33694 TCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATA---T 33750
|| || || ||||| || || || || || || | || ||| || || ||
Sbjct 1531672 TCGTTGACGATTCCATCTGAAGCGGCGAAGAATGCAAGAACGTGTGAGATGAAGTAACGC 1531613
Query 33751 TTTTCGTC-TGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTC 33809
| ||||| | | | | | || ||||| || | || ||| || || | ||| | |||||
Sbjct 1531612 TCATCGTCATTGAGCTTG-TTGTTCCAGTCGTGGAGATCCTTCGACAGATCAATCTCTTC 1531554
Query 33810 CACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTCCAGAT 33854
| ||||| || |||||||| ||||| || ||||| | ||||||
Sbjct 1531553 TGCGGTCCAGAAAGATGCCTCGGCCTTCTTGTACATCTGCCAGAT 1531509
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622945603697800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |