Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12- 03] 205 sequences; 69,693,031 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq124 127 2e-24 seq93 113 4e-20 >seq124 Length=198120 Score = 127 bits (140), Expect = 2e-24 Identities = 434/660 (66%), Gaps = 31/660 (5%) Strand=Plus/Plus Query 148238 CTTGCCTTCGGCCTCGTAATTTTCGTAAAGGTCCTCGAATTCTTGGCCATAGCAATCGTT 148297 ||||||||| |||||| || ||||| || ||||||| || | |||||| ||| Sbjct 126161 CTTGCCTTCACGCTCGTACTTCTCGTATAGAGCCTCGAACTCATCACCATAGACATCAGC 126220 Query 148298 TAAACCGGGACACTCGTCGGGGCACATCAATGACCA-TTTCCCTCCTGTCTTTACCCTCT 148356 || || || ||||||| |||||||||||| | ||| | ||| | || ||| || | || Sbjct 126221 CAAGCCTGGGCACTCGTTGGGGCACATCAAAGTCCACTCTCCATTCT-TCTCAACACGCT 126279 Query 148357 TCATAAACAGATCAGGTGTCCACATGGCAAAAAGAAGATCGCGAGCCTTCATATCCTCGG 148416 |||| || |||||||| |||||| ||| | | ||||| ||||| | ||||| Sbjct 126280 TCATGAAGAGATCAGGGATCCACAAGGCGTAGAAGAGATCACGAGCTCGGACTTCCTCTT 126339 Query 148417 CACCCATATTGCGCTTT---AGATCCaaaaaagta----aaaaCGTCTGCGTGCCAAGGC 148469 || | | |||| ||||| || ||| || || ||||||||||| ||| Sbjct 126340 TGCC---GTGGTTCTTTCGGAGATC----AAGGTACTCGAAGACATCTGCGTGCCATGGC 126392 Query 148470 TCGATGTATACGGTCATGGCGCC---TTTCCTTTTACCTCCTTGATCGACATGGCGTAGC 148526 |||| ||| | || | || || | || | || || ||||| ||||| | | | || Sbjct 126393 TCGAGGTAGATGGCGAAAGCACCTGGTCTCTTGTTGCCACCTTGGTCGACGTATC-TGGC 126451 Query 148527 A-TGCTATTAAAAACACGCAATGCA-GGTCCCAATCCCGCCGCAG-TTCCGTTTGTGGAT 148583 | || | || || ||||| | ||| || | || ||| | || ||||||| || Sbjct 126452 AGTGTTGTTGAAGACACGTA--GCATGGGAACGATACCGTTGGAGTTTCCGTTCGTTCCC 126509 Query 148584 TCAATTTTACTATTGGTGGCGCGAATTTGAGTG-ACATTCAGGCCGATGCCGCCTCCGTG 148642 |||| | | ||| || |||||| | ||| ||||| || ||||| || || | | Sbjct 126510 GCAATGTAGGCACCGGTAGCACGAATTCG-GTGAACATTGAGACCGATTCCACCAGCATT 126568 Query 148643 TTTAGATATCATGGCACAATCGTTGAGTGTTTTATAGATGCCGTTAATACTGTCCTCTTG 148702 || || |||||||| ||| || | ||| | ||||| |||| ||| || ||||||| Sbjct 126569 CTTGGAGATCATGGCGCAAGTCTTCAATGTATCGTAGATACCGTCAATGCTATCCTCTTT 126628 Query 148703 AATGTTAAGCAGGTAGCACGATGACATTTGAGGCATTTTCATG--CCAGACGAAAATAGA 148760 |||| | ||| |||| || || | ||| | || | || || | | |||| | Sbjct 126629 CATGTCGATAAGGAAGCATGAAGAGAGTTGTG--CTTGTGGTGTACCGGCGGCGAATAAA 126686 Query 148761 GTTGGACTAGCGTGAGTGAACAGCTTTGCCCGCATCAATCTATAGGATTCGATAGCGCTT 148820 ||||| ||| || ||||| ||| |||||| | || | ||||| || Sbjct 126687 GTTGGGGAAGCATGGGTGAAGCACTTCTGGGACATCAAGTTGTATGTCTCGATGGCAGCC 126746 Query 148821 TCGATGTCATCACCATGAATCTGTAGAGCTACACGCATCAGCATGTGTTGAGGCCTCTCG 148880 || || || ||||| ||||| | ||| || ||||| | ||| ||||| || | |||| Sbjct 126747 TCAATATCTTCACCGTGAATACCAACAGCCACTCGCATAATCATATGTTGTGGGCGCTCG 126806 >seq93 Length=1762202 Score = 113 bits (124), Expect = 4e-20 Identities = 146/202 (72%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 26779 TTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCG 26838 |||| || || | |||||||| | |||||| | || ||||||| ||||||||||| Sbjct 805893 TTGTCAAGACCCTGACTGGAAAGACCATCACCCTGGAGGTAGAATCCTCCGACACCATCG 805952 Query 26839 AGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCA 26898 | | || || ||||| ||||| ||||| || |||||||| |||||| | || | Sbjct 805953 ACAACGTTAAGTCGAAGATCCAGGACAAGGAAGGCATCCCTCCCGACCAACAACGCCTGA 806012 Query 26899 TTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAG 26958 | | || ||||| ||||||||||||| ||| | || |||||| || || || || | Sbjct 806013 TCTTCGCTGGCAAGCAACTCGAAGATGGACGAACCCTCTCCGACTACAATATCCAGAAGG 806072 Query 26959 AATCTACTATCCATCTGGTCCT 26980 | || || ||||||| ||||| Sbjct 806073 AGTCCACCCTCCATCTCGTCCT 806094 Score = 84.2 bits (92), Expect = 2e-11 Identities = 158/227 (70%), Gaps = 4/227 (2%) Strand=Plus/Minus Query 119645 GTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATTCAT 119704 ||| || || ||||| || || || || || ||||| || |||| || ||||| | ||| Sbjct 1532400 GTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTTCCGGCAAGTGAGATGTTCTCCAT 1532341 Query 119705 AAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAAC-AGTC 119763 || ||||| || || || | ||| | ||| |||| ||| | | ||||| || | Sbjct 1532340 GAAGTCGAATGGGTTGGCTGACTTGTAGACCTTCTCGTTGCCAAGAGC-AACAAGGAGAC 1532282 Query 119764 GATCTGCCACAAACTCGATGTATTCGCACATG-GATTGCGAATTCATGCCCAACATAGCG 119822 |||| || || ||||||||||||| |||| | ||| || |||||||| | | ||| Sbjct 1532281 GATCAGCAACGAACTCGATGTATTGCTTCATGAGGTTG-GAGTTCATGCCGAGGAGTGCG 1532223 Query 119823 ACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTC 119869 || | ||| | ||| ||||| |||| ||||| || || || || Sbjct 1532222 CAAGGAAGAGCCTCGGTCAAGAACTCCTGCTCAATCTCAACAGCCTC 1532176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478661173427600