Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12-
03] 205 sequences; 69,693,031 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq124 127 2e-24
seq93 113 4e-20
>seq124
Length=198120
Score = 127 bits (140), Expect = 2e-24
Identities = 434/660 (66%), Gaps = 31/660 (5%)
Strand=Plus/Plus
Query 148238 CTTGCCTTCGGCCTCGTAATTTTCGTAAAGGTCCTCGAATTCTTGGCCATAGCAATCGTT 148297
||||||||| |||||| || ||||| || ||||||| || | |||||| |||
Sbjct 126161 CTTGCCTTCACGCTCGTACTTCTCGTATAGAGCCTCGAACTCATCACCATAGACATCAGC 126220
Query 148298 TAAACCGGGACACTCGTCGGGGCACATCAATGACCA-TTTCCCTCCTGTCTTTACCCTCT 148356
|| || || ||||||| |||||||||||| | ||| | ||| | || ||| || | ||
Sbjct 126221 CAAGCCTGGGCACTCGTTGGGGCACATCAAAGTCCACTCTCCATTCT-TCTCAACACGCT 126279
Query 148357 TCATAAACAGATCAGGTGTCCACATGGCAAAAAGAAGATCGCGAGCCTTCATATCCTCGG 148416
|||| || |||||||| |||||| ||| | | ||||| ||||| | |||||
Sbjct 126280 TCATGAAGAGATCAGGGATCCACAAGGCGTAGAAGAGATCACGAGCTCGGACTTCCTCTT 126339
Query 148417 CACCCATATTGCGCTTT---AGATCCaaaaaagta----aaaaCGTCTGCGTGCCAAGGC 148469
|| | | |||| ||||| || ||| || || ||||||||||| |||
Sbjct 126340 TGCC---GTGGTTCTTTCGGAGATC----AAGGTACTCGAAGACATCTGCGTGCCATGGC 126392
Query 148470 TCGATGTATACGGTCATGGCGCC---TTTCCTTTTACCTCCTTGATCGACATGGCGTAGC 148526
|||| ||| | || | || || | || | || || ||||| ||||| | | | ||
Sbjct 126393 TCGAGGTAGATGGCGAAAGCACCTGGTCTCTTGTTGCCACCTTGGTCGACGTATC-TGGC 126451
Query 148527 A-TGCTATTAAAAACACGCAATGCA-GGTCCCAATCCCGCCGCAG-TTCCGTTTGTGGAT 148583
| || | || || ||||| | ||| || | || ||| | || ||||||| ||
Sbjct 126452 AGTGTTGTTGAAGACACGTA--GCATGGGAACGATACCGTTGGAGTTTCCGTTCGTTCCC 126509
Query 148584 TCAATTTTACTATTGGTGGCGCGAATTTGAGTG-ACATTCAGGCCGATGCCGCCTCCGTG 148642
|||| | | ||| || |||||| | ||| ||||| || ||||| || || | |
Sbjct 126510 GCAATGTAGGCACCGGTAGCACGAATTCG-GTGAACATTGAGACCGATTCCACCAGCATT 126568
Query 148643 TTTAGATATCATGGCACAATCGTTGAGTGTTTTATAGATGCCGTTAATACTGTCCTCTTG 148702
|| || |||||||| ||| || | ||| | ||||| |||| ||| || |||||||
Sbjct 126569 CTTGGAGATCATGGCGCAAGTCTTCAATGTATCGTAGATACCGTCAATGCTATCCTCTTT 126628
Query 148703 AATGTTAAGCAGGTAGCACGATGACATTTGAGGCATTTTCATG--CCAGACGAAAATAGA 148760
|||| | ||| |||| || || | ||| | || | || || | | |||| |
Sbjct 126629 CATGTCGATAAGGAAGCATGAAGAGAGTTGTG--CTTGTGGTGTACCGGCGGCGAATAAA 126686
Query 148761 GTTGGACTAGCGTGAGTGAACAGCTTTGCCCGCATCAATCTATAGGATTCGATAGCGCTT 148820
||||| ||| || ||||| ||| |||||| | || | ||||| ||
Sbjct 126687 GTTGGGGAAGCATGGGTGAAGCACTTCTGGGACATCAAGTTGTATGTCTCGATGGCAGCC 126746
Query 148821 TCGATGTCATCACCATGAATCTGTAGAGCTACACGCATCAGCATGTGTTGAGGCCTCTCG 148880
|| || || ||||| ||||| | ||| || ||||| | ||| ||||| || | ||||
Sbjct 126747 TCAATATCTTCACCGTGAATACCAACAGCCACTCGCATAATCATATGTTGTGGGCGCTCG 126806
>seq93
Length=1762202
Score = 113 bits (124), Expect = 4e-20
Identities = 146/202 (72%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 26779 TTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCG 26838
|||| || || | |||||||| | |||||| | || ||||||| |||||||||||
Sbjct 805893 TTGTCAAGACCCTGACTGGAAAGACCATCACCCTGGAGGTAGAATCCTCCGACACCATCG 805952
Query 26839 AGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCA 26898
| | || || ||||| ||||| ||||| || |||||||| |||||| | || |
Sbjct 805953 ACAACGTTAAGTCGAAGATCCAGGACAAGGAAGGCATCCCTCCCGACCAACAACGCCTGA 806012
Query 26899 TTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAG 26958
| | || ||||| ||||||||||||| ||| | || |||||| || || || || |
Sbjct 806013 TCTTCGCTGGCAAGCAACTCGAAGATGGACGAACCCTCTCCGACTACAATATCCAGAAGG 806072
Query 26959 AATCTACTATCCATCTGGTCCT 26980
| || || ||||||| |||||
Sbjct 806073 AGTCCACCCTCCATCTCGTCCT 806094
Score = 84.2 bits (92), Expect = 2e-11
Identities = 158/227 (70%), Gaps = 4/227 (2%)
Strand=Plus/Minus
Query 119645 GTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATTCAT 119704
||| || || ||||| || || || || || ||||| || |||| || ||||| | |||
Sbjct 1532400 GTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTTCCGGCAAGTGAGATGTTCTCCAT 1532341
Query 119705 AAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAAC-AGTC 119763
|| ||||| || || || | ||| | ||| |||| ||| | | ||||| || |
Sbjct 1532340 GAAGTCGAATGGGTTGGCTGACTTGTAGACCTTCTCGTTGCCAAGAGC-AACAAGGAGAC 1532282
Query 119764 GATCTGCCACAAACTCGATGTATTCGCACATG-GATTGCGAATTCATGCCCAACATAGCG 119822
|||| || || ||||||||||||| |||| | ||| || |||||||| | | |||
Sbjct 1532281 GATCAGCAACGAACTCGATGTATTGCTTCATGAGGTTG-GAGTTCATGCCGAGGAGTGCG 1532223
Query 119823 ACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTC 119869
|| | ||| | ||| ||||| |||| ||||| || || || ||
Sbjct 1532222 CAAGGAAGAGCCTCGGTCAAGAACTCCTGCTCAATCTCAACAGCCTC 1532176
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478661173427600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |