Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12- 03] 205 sequences; 69,693,031 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq124 315 2e-80 >seq124 Length=198120 Score = 315 bits (348), Expect = 2e-80 Identities = 1055/1624 (65%), Gaps = 30/1624 (2%) Strand=Plus/Minus Query 363448 GAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGAT 363507 || ||||| || |||||| | ||||| || ||| ||||||| || | ||| |||| Sbjct 126805 GAGCGCCCACAACATATGATTATGCGAGTGGCTGTTGGTATTCACGGTGAAGATATTGAG 126746 Query 363508 GCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGT-GTA-TTCACGCACGCCACGCCAA 363565 || || || || ||||| || ||| | || | | || ||||| || || | |||| Sbjct 126745 GCTGCCATCGAGACATACAA-CTTG-ATGTCCCAGAAGTGCTTCACCCATGCTTCCCCAA 126688 Query 363566 CAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGA 363625 | | | | || || || | | |||| | ||||| ||||| ||| | | |||| Sbjct 126687 CTTTATTCGCCGCCGGTACACCACAAGCACAACTCTCTTCATGCTTCCTTATCGACATGA 126628 Query 363626 AGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGA 363685 | || ||| ||| || ||||||| || ||| | |||| ||| || | || ||||||| Sbjct 126627 AAGAGGATAGCATTGACGGTATCTACGATACATTGAAGACTTGCGCCATGATCTCCAAGA 126568 Query 363686 ATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAGT---TACATTC 363742 |||| || ||||| ||| | | ||| ||||||| | | || |||||| Sbjct 126567 ATGCTGGTGGAATCGGTCTCAATGTTCACCGAATTCGTGCT---ACCGGTGCCTACATTG 126511 Query 363743 GCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTG 363802 || || ||| |||| || || | ||||||||||| ||||| || |||| |||| Sbjct 126510 CGGGAACGAACGGAAACTCCAACGGTATCGTTCCCATGCTACGTGTCTTCAACAACACTG 126451 Query 363803 CGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGC 363862 | || ||||||||||| ||||| ||| | ||| || || || || || ||||||| Sbjct 126450 CCAGATACGTCGACCAAGGTGGCAACAAGAGACCAGGTGCTTTCGCCATCTACCTCGAGC 126391 Query 363863 CTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAAT 363922 | || || ||| | || |||| ||||| ||||| || ||| || ||||||||| Sbjct 126390 CATGGCACGCAGATGTCTTCGAGTACCTTGATCTCCGAAAGAACCACGGCAAAGAGGAAG 126331 Query 363923 TGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGG 363982 | || || |||||||| ||||| || | ||| | |||| | || |||||||| || | Sbjct 126330 TCCGAGCTCGTGATCTCTTCTACGCCTTGTGGATCCCTGATCTCTTCATGAAGCGTGTTG 126271 Query 363983 AGGCAGGTAAGA-ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTA 364041 | | || || | ||| | | | ||||| |||| || ||||| | | ||||| Sbjct 126270 A-GAAGAATGGAGAGTGGACTTTGATGTGCCCCAACGAGTGCCCAGGCTTGGCTGATGTC 126212 Query 364042 TGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAG 364101 | ||||| || | | ||||||||||| ||||| || || || |||| ||| ||| Sbjct 126211 TATGGTGATGAGTTCGAGGCTCTATACGAGAAGTACGAGCGTGAAGGCAAGGGTCGCAAG 126152 Query 364102 ACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACA 364161 || || |||||||| || |||| ||||| |||| | |||| ||||| || | Sbjct 126151 ACCATCAAGGCACAGAAACTTTGGTACTCCATCTTGGAGGCACAGACCGAGACTGGGAAT 126092 Query 364162 CCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACA 364221 || | ||| | ||||| ||| | ||||| | ||| ||||||| || |||| || ||| Sbjct 126091 CCATTCATGCTCTACAAGGATGCTTGCAATAGAAAGAGCAACCAGAAGAACCTCGGCACA 126032 Query 364222 ATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGC 364280 |||| | || |||||| || || |||||| | || ||| ||||| || ||| || Sbjct 126031 ATTC-GAAGCTCCAACCTCTGCACTGAGATTGTGGAGTACTGTGCTCCTGATGAGGTCGC 125973 Query 364281 CGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT------AAAAGATGGTACTTT 364334 || || ||| | || || | || || || | | || || |||||||| | Sbjct 125972 TGTTTGCAACTTGGCTTCCCTTGCTCTCCCCACCTACGTCAACACCAACGATGGTACCTA 125913 Query 364335 TGACCACCAGCATCTTTATGACGTAACCTATCATG-CTACTTGCAATCTCGACAAGGTTA 364393 ||| | | || | || || | | || | | | || || ||||| | | Sbjct 125912 CGACTTTGCGAAGCTCCACGAAGTCTGCCAGGTTGTCGTCAAG-AACCTGAACAAGATCA 125854 Query 364394 TCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGA 364453 | || || || || || | || || ||| || || | ||||| || || | Sbjct 125853 TTGATGTCAACTACTACCCTGTCCCCGAGGCCAAGAAGAGCAACTTCCGTCACCGACCTA 125794 Query 364454 TTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATT 364513 ||| | | ||||| || || || ||||| | ||| || ||| | |||| || | Sbjct 125793 TTGCTGTCGGTGTCCAAGGTCTTGCTGATGCTTTCTTGGCTCTCCGCCTTCCATTCGACT 125734 Query 364514 CGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGA 364573 | ||||| || || || | ||||||| || || || || ||||| | | Sbjct 125733 CTCCTGAGGCCAAGCACCTCAACATCCAGATCTTCGAGACCATTTACCACGCCGCTCTCA 125674 Query 364574 CTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTC 364633 || |||| ||| | || || | ||| ||| || || || || || || Sbjct 125673 CTTCTTCAGTTGAGCTTGCCAAGGTTCACGGACCATACGAGACATACGAAGGTTCACCCG 125614 Query 364634 TTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACT 364693 | || |||| | | |||| ||| | ||| |||||| || | | || ||| ||| Sbjct 125613 TCTCCAAGGGTGAGCTTCAGTATGACATGTGGGGTGTCACTCCTACCGACCTCTGGGACT 125554 Query 364694 GGGATACGCT-ACGTTCCAACGTTAAGAAGCATGGTACTCGCAA---CTCCCTCGTTACA 364749 ||||||| | | | | | | ||| |||| ||| |||||| || |||||| Sbjct 125553 GGGATACCTTGAAGCAGC-AGATCAAGCAGCACGGTGTTCGCAACAGCTTGCTCGTT--- 125498 Query 364750 GCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCG 364809 || |||||||| || || ||| || || ||||| ||||||||||||||| || Sbjct 125497 GCTCCCATGCCAACTGCCAGTACCAGTCAAATTCTCGGCTTCAACGAGTGCTTCGAGCCA 125438 Query 364810 TTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAG 364869 | ||| ||| | || || || || |||||| | || ||||| | ||| || || Sbjct 125437 TACACATCCAACATCTACTCTCGTCGTGTTCTTGCTGGTGAATTCCAGGTCGTCAACCCA 125378 Query 364870 TACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATC 364929 | || | |||||||| ||| || || ||| ||||| |||||||||| ||| Sbjct 125377 TGGCTCCTGAAGGATCTCGTCGATATGGGTCTATGGTCTGACAACATGAAGAACCGCATC 125318 Query 364930 ATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATT 364989 ||||||| | ||||||| | ||||||||||| | |||| || | ||| || | Sbjct 125317 ATCGCCGATGGTGGTTCTATCCAGAACATTCCCAACATCCCAGCTGACATCAAGGCTCTC 125258 Query 364990 TACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGT 365049 ||||| ||||| ||||| || || ||||| || | | ||||| || || || ||| Sbjct 125257 TACAAGACCGTCTGGGAGATCTCTCAACGAACAATCGTCCAGATGGCCGCTGACCGTGGT 125198 Query 365050 GCTT 365053 |||| Sbjct 125197 GCTT 125194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303350176660310