Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12-
03] 205 sequences; 69,693,031 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq124 315 2e-80
>seq124
Length=198120
Score = 315 bits (348), Expect = 2e-80
Identities = 1055/1624 (65%), Gaps = 30/1624 (2%)
Strand=Plus/Minus
Query 363448 GAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGAT 363507
|| ||||| || |||||| | ||||| || ||| ||||||| || | ||| ||||
Sbjct 126805 GAGCGCCCACAACATATGATTATGCGAGTGGCTGTTGGTATTCACGGTGAAGATATTGAG 126746
Query 363508 GCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGT-GTA-TTCACGCACGCCACGCCAA 363565
|| || || || ||||| || ||| | || | | || ||||| || || | ||||
Sbjct 126745 GCTGCCATCGAGACATACAA-CTTG-ATGTCCCAGAAGTGCTTCACCCATGCTTCCCCAA 126688
Query 363566 CAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGA 363625
| | | | || || || | | |||| | ||||| ||||| ||| | | ||||
Sbjct 126687 CTTTATTCGCCGCCGGTACACCACAAGCACAACTCTCTTCATGCTTCCTTATCGACATGA 126628
Query 363626 AGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGA 363685
| || ||| ||| || ||||||| || ||| | |||| ||| || | || |||||||
Sbjct 126627 AAGAGGATAGCATTGACGGTATCTACGATACATTGAAGACTTGCGCCATGATCTCCAAGA 126568
Query 363686 ATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAGT---TACATTC 363742
|||| || ||||| ||| | | ||| ||||||| | | || ||||||
Sbjct 126567 ATGCTGGTGGAATCGGTCTCAATGTTCACCGAATTCGTGCT---ACCGGTGCCTACATTG 126511
Query 363743 GCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTG 363802
|| || ||| |||| || || | ||||||||||| ||||| || |||| ||||
Sbjct 126510 CGGGAACGAACGGAAACTCCAACGGTATCGTTCCCATGCTACGTGTCTTCAACAACACTG 126451
Query 363803 CGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGC 363862
| || ||||||||||| ||||| ||| | ||| || || || || || |||||||
Sbjct 126450 CCAGATACGTCGACCAAGGTGGCAACAAGAGACCAGGTGCTTTCGCCATCTACCTCGAGC 126391
Query 363863 CTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAAT 363922
| || || ||| | || |||| ||||| ||||| || ||| || |||||||||
Sbjct 126390 CATGGCACGCAGATGTCTTCGAGTACCTTGATCTCCGAAAGAACCACGGCAAAGAGGAAG 126331
Query 363923 TGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGG 363982
| || || |||||||| ||||| || | ||| | |||| | || |||||||| || |
Sbjct 126330 TCCGAGCTCGTGATCTCTTCTACGCCTTGTGGATCCCTGATCTCTTCATGAAGCGTGTTG 126271
Query 363983 AGGCAGGTAAGA-ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTA 364041
| | || || | ||| | | | ||||| |||| || ||||| | | |||||
Sbjct 126270 A-GAAGAATGGAGAGTGGACTTTGATGTGCCCCAACGAGTGCCCAGGCTTGGCTGATGTC 126212
Query 364042 TGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAG 364101
| ||||| || | | ||||||||||| ||||| || || || |||| ||| |||
Sbjct 126211 TATGGTGATGAGTTCGAGGCTCTATACGAGAAGTACGAGCGTGAAGGCAAGGGTCGCAAG 126152
Query 364102 ACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACA 364161
|| || |||||||| || |||| ||||| |||| | |||| ||||| || |
Sbjct 126151 ACCATCAAGGCACAGAAACTTTGGTACTCCATCTTGGAGGCACAGACCGAGACTGGGAAT 126092
Query 364162 CCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACA 364221
|| | ||| | ||||| ||| | ||||| | ||| ||||||| || |||| || |||
Sbjct 126091 CCATTCATGCTCTACAAGGATGCTTGCAATAGAAAGAGCAACCAGAAGAACCTCGGCACA 126032
Query 364222 ATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGC 364280
|||| | || |||||| || || |||||| | || ||| ||||| || ||| ||
Sbjct 126031 ATTC-GAAGCTCCAACCTCTGCACTGAGATTGTGGAGTACTGTGCTCCTGATGAGGTCGC 125973
Query 364281 CGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT------AAAAGATGGTACTTT 364334
|| || ||| | || || | || || || | | || || |||||||| |
Sbjct 125972 TGTTTGCAACTTGGCTTCCCTTGCTCTCCCCACCTACGTCAACACCAACGATGGTACCTA 125913
Query 364335 TGACCACCAGCATCTTTATGACGTAACCTATCATG-CTACTTGCAATCTCGACAAGGTTA 364393
||| | | || | || || | | || | | | || || ||||| | |
Sbjct 125912 CGACTTTGCGAAGCTCCACGAAGTCTGCCAGGTTGTCGTCAAG-AACCTGAACAAGATCA 125854
Query 364394 TCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGA 364453
| || || || || || | || || ||| || || | ||||| || || |
Sbjct 125853 TTGATGTCAACTACTACCCTGTCCCCGAGGCCAAGAAGAGCAACTTCCGTCACCGACCTA 125794
Query 364454 TTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATT 364513
||| | | ||||| || || || ||||| | ||| || ||| | |||| || |
Sbjct 125793 TTGCTGTCGGTGTCCAAGGTCTTGCTGATGCTTTCTTGGCTCTCCGCCTTCCATTCGACT 125734
Query 364514 CGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGA 364573
| ||||| || || || | ||||||| || || || || ||||| | |
Sbjct 125733 CTCCTGAGGCCAAGCACCTCAACATCCAGATCTTCGAGACCATTTACCACGCCGCTCTCA 125674
Query 364574 CTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTC 364633
|| |||| ||| | || || | ||| ||| || || || || || ||
Sbjct 125673 CTTCTTCAGTTGAGCTTGCCAAGGTTCACGGACCATACGAGACATACGAAGGTTCACCCG 125614
Query 364634 TTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACT 364693
| || |||| | | |||| ||| | ||| |||||| || | | || ||| |||
Sbjct 125613 TCTCCAAGGGTGAGCTTCAGTATGACATGTGGGGTGTCACTCCTACCGACCTCTGGGACT 125554
Query 364694 GGGATACGCT-ACGTTCCAACGTTAAGAAGCATGGTACTCGCAA---CTCCCTCGTTACA 364749
||||||| | | | | | | ||| |||| ||| |||||| || ||||||
Sbjct 125553 GGGATACCTTGAAGCAGC-AGATCAAGCAGCACGGTGTTCGCAACAGCTTGCTCGTT--- 125498
Query 364750 GCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCG 364809
|| |||||||| || || ||| || || ||||| ||||||||||||||| ||
Sbjct 125497 GCTCCCATGCCAACTGCCAGTACCAGTCAAATTCTCGGCTTCAACGAGTGCTTCGAGCCA 125438
Query 364810 TTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAG 364869
| ||| ||| | || || || || |||||| | || ||||| | ||| || ||
Sbjct 125437 TACACATCCAACATCTACTCTCGTCGTGTTCTTGCTGGTGAATTCCAGGTCGTCAACCCA 125378
Query 364870 TACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATC 364929
| || | |||||||| ||| || || ||| ||||| |||||||||| |||
Sbjct 125377 TGGCTCCTGAAGGATCTCGTCGATATGGGTCTATGGTCTGACAACATGAAGAACCGCATC 125318
Query 364930 ATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATT 364989
||||||| | ||||||| | ||||||||||| | |||| || | ||| || |
Sbjct 125317 ATCGCCGATGGTGGTTCTATCCAGAACATTCCCAACATCCCAGCTGACATCAAGGCTCTC 125258
Query 364990 TACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGT 365049
||||| ||||| ||||| || || ||||| || | | ||||| || || || |||
Sbjct 125257 TACAAGACCGTCTGGGAGATCTCTCAACGAACAATCGTCCAGATGGCCGCTGACCGTGGT 125198
Query 365050 GCTT 365053
||||
Sbjct 125197 GCTT 125194
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303350176660310
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |