Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12- 03] 205 sequences; 69,693,031 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq99 105 6e-18 seq124 104 2e-17 seq93 104 2e-17 seq62 96.9 3e-15 >seq99 Length=1752785 Score = 105 bits (116), Expect = 6e-18 Identities = 132/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 ||||||| |||||||||||||||| ||| || ||||| || |||||||| ||| ||| Sbjct 456628 CCTTTTGGATGTTGTAATCGCTCAGGGTACGGCCATCCTCGAGTTGCTTGCCAGCGAAGA 456569 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | | || || ||||| || ||||||||||| ||||| ||| || ||||| | | Sbjct 456568 TCAGGCGTTGTTGGTCGGGTGGGATTCCTTCCTTGTCCTGGATCTTGGACTTGACGTTGT 456509 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | ||| ||| | ||||| | |||| ||| | || || || || || || || |||| Sbjct 456508 CGATAGTGTCGCTCGACTCCACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTAACGA 456449 Query 131225 A 131225 | Sbjct 456448 A 456448 >seq124 Length=198120 Score = 104 bits (114), Expect = 2e-17 Identities = 902/1441 (63%), Gaps = 37/1441 (3%) Strand=Plus/Plus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||||||||| || || || || | |||||||| | || | ||| || ||| | || Sbjct 125382 TTGACGACCTGGAATTCACCAGCAAGAACACGACGAGAGTAGATGTTGGATGTGTATGGC 125441 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || || ||||||| ||| || |||||| ||| | || || |||||| || || Sbjct 125442 TCGAAGCACTCGTTGAAGCCGAGAATTTGACTGGTACTGGCAGTTGGCATGGGAGCAACG 125501 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | || ||||| | ||||||| |||||| | | ||| | ||| |||| ||||| Sbjct 125502 AGCAAGCTGTTGCGAACACCGTGCTGCTTGATCTGCTGCTTCAAGGTATCCCAGTCCCAG 125561 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTG 145297 || || || | || |||||||||| ||||| | |||| | | |||| Sbjct 125562 AGGTCGGTAGGAGTGACACCCCACATGTCATACTGAAGCTCACCCTTGGAGACGGGTGAA 125621 Query 145298 CCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAACT--CGCCTCCAGAG 145355 |||| | | ||| || | ||||| |||| ||||| | |||| Sbjct 125622 CCTTCGTATGTCTCGTATGGTCCGTGAACCTTGGCAAGCT--CAACTGAAGAAGTGAGAG 125679 Query 145356 CGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGT 145415 || || ||||| |||||| || || ||||||| || | || ||| ||| Sbjct 125680 CGGCGTGGTAAATGGTCTCGAAGATCTGGATGTTGAGGTGCTTGGCCTCAGGAGAGTCGA 125739 Query 145416 ACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGCC 145475 | || | ||| || | |||||||| || || || || | || || | || || | Sbjct 125740 ATGGAAGGCGGAGAGCCAAGAAAGCATCAGCAAGACCTTGGACACCGACAGCAATAGGTC 125799 Query 145476 GATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATA-TCGATTACGGTCGATAATT 145534 | || | ||||||| || | ||| || ||| || | | | || || || || Sbjct 125800 GGTGACGGAAGTTGCTCTTCTTGGCCTCGGGGACAGGGTAGTAGTTGAC-ATCAATGATC 125858 Query 145535 TTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACCGA 145594 || |||| ||| || || |||| | | | | ||| ||||||| | | Sbjct 125859 TTGTTCAGGTTCTTGACGACAACCTGGCAGACTTCGTGGAGCTTCGCAAAGTCGTAGGTA 125918 Query 145595 GCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTGCCGTC 145654 | |||| | || || | || || | || ||||| || ||||| || | Sbjct 125919 CCATCGTTGGTGTTGACGTAGGTGGGGAGAGCAAGGGAAGCCAAGTTGCAAACAGCGACC 125978 Query 145655 TCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTCCC 145714 || || | | | ||| | || ||||| | ||| | ||| | | || || || Sbjct 125979 TCATCAGGAGCACAGTACTCCACAATCTCAGTGCAGAGGTTGGAGCTTCGAATTGTGCCG 126038 Query 145715 AGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGCCA 145774 || || | ||| || || || || ||||| || ||||||||||||||| | || ||| Sbjct 126039 AGGTTCTTCTGGTTGCTCTTTCTATTGCAAGCATCCTTGTAGAGCATGAATGGATTCCCA 126098 Query 145775 GTCTCCACCTGCGTCTCCACGATAAAACGGTGC--AAG-TCCTGCGCACGCACCTGCTGC 145831 ||||| ||| | ||||| ||| | || | ||| | ||| || | || || Sbjct 126099 GTCTCGGTCTGTGCCTCCAAGATGGA---GTACCAAAGTTTCTGTGC-----CTTGATGG 126150 Query 145832 TGGTAGCGGCCCT---CTTC---TTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCG 145885 | | ||| |||| |||| ||||| ||| ||| || |||| ||| | ||| Sbjct 126151 T-CTTGCGACCCTTGCCTTCACGCTCGTACTTCTCGTATAGAGCCTCGAACTCATCACCA 126209 Query 145886 TAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCG 145945 ||| ||| | || ||| || |||| |||||| ||||||| | ||| | || || Sbjct 126210 TAGACATCAGCCAAGCCTGGGCACTCGTTGGGGCACATCAAAGTCCACTCTCCATTCTTC 126269 Query 145946 TTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTTG 146005 | || |||| ||| || | ||| || | ||||| ||||| | | || || ||| | Sbjct 126270 TCAACACGCTTCATGAAGAGATCAGGGATCCACAAGGCGTAGAAGAGATCACGAGCTCGG 126329 Query 146006 CAATCCTCAGCACCCATGTTTCGCTTC--AAATTAA-GCACACTATAGATGTCCGCGTGC 146062 ||||| || || ||| ||| | || || | || | | ||| || |||||| Sbjct 126330 ACTTCCTC-TTTGCCGTGGTTC-TTTCGGAGATCAAGGTACTCGA-AGACATCTGCGTGC 126386 Query 146063 CACGGTTCAATATAGACGGCGAGGGCTCCT--TTTCGT-TTGCCACCCTGGTCCACGTGA 146119 || || || | |||| ||||| || ||| | || | |||||||| ||||| |||| Sbjct 126387 CATGGCTCGAGGTAGATGGCGAAAGCACCTGGTCTCTTGTTGCCACCTTGGTCGACGTAT 126446 Query 146120 CGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCGTA 146179 | | ||||||| ||||| || | |||||| ||| ||| ||| |||||||| Sbjct 126447 CTGGCAGTGTTGTTGAAGACACGTAGCATGGGAACGATACCGTTGGAGTTTCCGTTCGTT 126506 Query 146180 GAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGCCGCCG 146239 || || ||| | || | | |||||||| | |||| || || | Sbjct 126507 CCCGCAATGTAGGCACCGGTAGCACGAATTCGGTGAACATTGAGACCGATTCCACCAGCA 126566 Query 146240 TACTTGGATATAGCGGCGC-AGTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATCGCT 146298 | |||||| || ||||| |||| | | || |||||||| |||||||||||||| Sbjct 126567 TTCTTGGAGATCATGGCGCAAGTCTTC-AATGTATCGTAGATACCGTCAATGCTATCCTC 126625 Query 146299 TCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCGAGAACAA 146358 | ||| ||| || ||||| || | | || || || || || || | ||| || Sbjct 126626 TTTCATGTCGATAAGGAAGCATGAAGAGAGTTGTGCTTGTGGTGTACCGGCGGCGAATAA 126685 Query 146359 CGTCGGGCTCGCGTGCGT-AAACATTTTTCGGCTCATCATCCGATACGTTTCGATAGCGT 146417 || ||| || || || || || || | || ||||| || || ||||| || Sbjct 126686 AGTTGGGGAAGCATGGGTGAAGCACTTCT-GGGACATCAAGTTGTATGTCTCGATGGCAG 126744 Query 146418 CTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTGGGGCCGCT 146477 | | ||| || || || ||||| || | ||| || ||||| | ||| ||||| || |||| Sbjct 126745 CCTCAATATCTTCACCGTGAATACCAACAGCCACTCGCATAATCATATGTTGTGGGCGCT 126804 Query 146478 C 146478 | Sbjct 126805 C 126805 >seq93 Length=1762202 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| ||||| | || |||||||||||||||||||| |||||| Sbjct 806565 CCACCACGGAGACGGAGCACCAAATGGAGAGTTGACTCCTTTTGAATGTTGTAGTCGCTC 806506 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||| | ||||| || || |||| || ||||||||||| || || Sbjct 806505 AAGGTACGACCATCCTCCAATTGCTTACCAGCAAAGATCAATCGCTGCTGGTCAGGTGGA 806446 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || || || ||| | | || ||||| | || | || || | ||||| | Sbjct 806445 ATACCCTCCTTATC-CTGAATCTTTGACTTGACATTGTCAATGGTGTCTGACGACTCCAC 806387 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | || | || || || || | ||| || || || ||||||||| Sbjct 806386 TTCCAATGTGATTGTCTTGCCAGTCAAAGTCTTGACAAAGATCTGCATG 806338 >seq62 Length=1271336 Score = 96.9 bits (106), Expect = 3e-15 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| ||||||||||| || | |||||| ||||| || ||||| || || ||| Sbjct 898281 CCTTCTGAATGTTGTAGTCCGAAAGGGTGCGGCCATCCTCAAGTTGCTTTCCAGCAAAGA 898340 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | || |||||||||||||| |||||||| || ||||| ||| || ||||| | | Sbjct 898341 TCAATCGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGT 898400 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | |||||| ||||||||| || | || | ||| || || || || || || |||| Sbjct 898401 CGATCGTATCGCTGGACTCGACCTCAAGAGTGATGGTCTTGCCCGTAAGGGTCTTGACGA 898460 Query 131225 A 131225 | Sbjct 898461 A 898461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472011590467200