Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12-
03] 205 sequences; 69,693,031 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq99 105 6e-18
seq124 104 2e-17
seq93 104 2e-17
seq62 96.9 3e-15
>seq99
Length=1752785
Score = 105 bits (116), Expect = 6e-18
Identities = 132/181 (73%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104
||||||| |||||||||||||||| ||| || ||||| || |||||||| ||| |||
Sbjct 456628 CCTTTTGGATGTTGTAATCGCTCAGGGTACGGCCATCCTCGAGTTGCTTGCCAGCGAAGA 456569
Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164
| | || || ||||| || ||||||||||| ||||| ||| || ||||| | |
Sbjct 456568 TCAGGCGTTGTTGGTCGGGTGGGATTCCTTCCTTGTCCTGGATCTTGGACTTGACGTTGT 456509
Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
| | ||| ||| | ||||| | |||| ||| | || || || || || || || ||||
Sbjct 456508 CGATAGTGTCGCTCGACTCCACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTAACGA 456449
Query 131225 A 131225
|
Sbjct 456448 A 456448
>seq124
Length=198120
Score = 104 bits (114), Expect = 2e-17
Identities = 902/1441 (63%), Gaps = 37/1441 (3%)
Strand=Plus/Plus
Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117
||||||||||| || || || || | |||||||| | || | ||| || ||| | ||
Sbjct 125382 TTGACGACCTGGAATTCACCAGCAAGAACACGACGAGAGTAGATGTTGGATGTGTATGGC 125441
Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177
|| || ||||||| ||| || |||||| ||| | || || |||||| || ||
Sbjct 125442 TCGAAGCACTCGTTGAAGCCGAGAATTTGACTGGTACTGGCAGTTGGCATGGGAGCAACG 125501
Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237
| || ||||| | ||||||| |||||| | | ||| | ||| |||| |||||
Sbjct 125502 AGCAAGCTGTTGCGAACACCGTGCTGCTTGATCTGCTGCTTCAAGGTATCCCAGTCCCAG 125561
Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTG 145297
|| || || | || |||||||||| ||||| | |||| | | ||||
Sbjct 125562 AGGTCGGTAGGAGTGACACCCCACATGTCATACTGAAGCTCACCCTTGGAGACGGGTGAA 125621
Query 145298 CCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAACT--CGCCTCCAGAG 145355
|||| | | ||| || | ||||| |||| ||||| | ||||
Sbjct 125622 CCTTCGTATGTCTCGTATGGTCCGTGAACCTTGGCAAGCT--CAACTGAAGAAGTGAGAG 125679
Query 145356 CGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGT 145415
|| || ||||| |||||| || || ||||||| || | || ||| |||
Sbjct 125680 CGGCGTGGTAAATGGTCTCGAAGATCTGGATGTTGAGGTGCTTGGCCTCAGGAGAGTCGA 125739
Query 145416 ACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGCC 145475
| || | ||| || | |||||||| || || || || | || || | || || |
Sbjct 125740 ATGGAAGGCGGAGAGCCAAGAAAGCATCAGCAAGACCTTGGACACCGACAGCAATAGGTC 125799
Query 145476 GATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATA-TCGATTACGGTCGATAATT 145534
| || | ||||||| || | ||| || ||| || | | | || || || ||
Sbjct 125800 GGTGACGGAAGTTGCTCTTCTTGGCCTCGGGGACAGGGTAGTAGTTGAC-ATCAATGATC 125858
Query 145535 TTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACCGA 145594
|| |||| ||| || || |||| | | | | ||| ||||||| | |
Sbjct 125859 TTGTTCAGGTTCTTGACGACAACCTGGCAGACTTCGTGGAGCTTCGCAAAGTCGTAGGTA 125918
Query 145595 GCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTGCCGTC 145654
| |||| | || || | || || | || ||||| || ||||| || |
Sbjct 125919 CCATCGTTGGTGTTGACGTAGGTGGGGAGAGCAAGGGAAGCCAAGTTGCAAACAGCGACC 125978
Query 145655 TCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTCCC 145714
|| || | | | ||| | || ||||| | ||| | ||| | | || || ||
Sbjct 125979 TCATCAGGAGCACAGTACTCCACAATCTCAGTGCAGAGGTTGGAGCTTCGAATTGTGCCG 126038
Query 145715 AGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGCCA 145774
|| || | ||| || || || || ||||| || ||||||||||||||| | || |||
Sbjct 126039 AGGTTCTTCTGGTTGCTCTTTCTATTGCAAGCATCCTTGTAGAGCATGAATGGATTCCCA 126098
Query 145775 GTCTCCACCTGCGTCTCCACGATAAAACGGTGC--AAG-TCCTGCGCACGCACCTGCTGC 145831
||||| ||| | ||||| ||| | || | ||| | ||| || | || ||
Sbjct 126099 GTCTCGGTCTGTGCCTCCAAGATGGA---GTACCAAAGTTTCTGTGC-----CTTGATGG 126150
Query 145832 TGGTAGCGGCCCT---CTTC---TTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCG 145885
| | ||| |||| |||| ||||| ||| ||| || |||| ||| | |||
Sbjct 126151 T-CTTGCGACCCTTGCCTTCACGCTCGTACTTCTCGTATAGAGCCTCGAACTCATCACCA 126209
Query 145886 TAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCG 145945
||| ||| | || ||| || |||| |||||| ||||||| | ||| | || ||
Sbjct 126210 TAGACATCAGCCAAGCCTGGGCACTCGTTGGGGCACATCAAAGTCCACTCTCCATTCTTC 126269
Query 145946 TTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTTG 146005
| || |||| ||| || | ||| || | ||||| ||||| | | || || ||| |
Sbjct 126270 TCAACACGCTTCATGAAGAGATCAGGGATCCACAAGGCGTAGAAGAGATCACGAGCTCGG 126329
Query 146006 CAATCCTCAGCACCCATGTTTCGCTTC--AAATTAA-GCACACTATAGATGTCCGCGTGC 146062
||||| || || ||| ||| | || || | || | | ||| || ||||||
Sbjct 126330 ACTTCCTC-TTTGCCGTGGTTC-TTTCGGAGATCAAGGTACTCGA-AGACATCTGCGTGC 126386
Query 146063 CACGGTTCAATATAGACGGCGAGGGCTCCT--TTTCGT-TTGCCACCCTGGTCCACGTGA 146119
|| || || | |||| ||||| || ||| | || | |||||||| ||||| ||||
Sbjct 126387 CATGGCTCGAGGTAGATGGCGAAAGCACCTGGTCTCTTGTTGCCACCTTGGTCGACGTAT 126446
Query 146120 CGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCGTA 146179
| | ||||||| ||||| || | |||||| ||| ||| ||| ||||||||
Sbjct 126447 CTGGCAGTGTTGTTGAAGACACGTAGCATGGGAACGATACCGTTGGAGTTTCCGTTCGTT 126506
Query 146180 GAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGCCGCCG 146239
|| || ||| | || | | |||||||| | |||| || || |
Sbjct 126507 CCCGCAATGTAGGCACCGGTAGCACGAATTCGGTGAACATTGAGACCGATTCCACCAGCA 126566
Query 146240 TACTTGGATATAGCGGCGC-AGTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATCGCT 146298
| |||||| || ||||| |||| | | || |||||||| ||||||||||||||
Sbjct 126567 TTCTTGGAGATCATGGCGCAAGTCTTC-AATGTATCGTAGATACCGTCAATGCTATCCTC 126625
Query 146299 TCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCGAGAACAA 146358
| ||| ||| || ||||| || | | || || || || || || | ||| ||
Sbjct 126626 TTTCATGTCGATAAGGAAGCATGAAGAGAGTTGTGCTTGTGGTGTACCGGCGGCGAATAA 126685
Query 146359 CGTCGGGCTCGCGTGCGT-AAACATTTTTCGGCTCATCATCCGATACGTTTCGATAGCGT 146417
|| ||| || || || || || || | || ||||| || || ||||| ||
Sbjct 126686 AGTTGGGGAAGCATGGGTGAAGCACTTCT-GGGACATCAAGTTGTATGTCTCGATGGCAG 126744
Query 146418 CTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTGGGGCCGCT 146477
| | ||| || || || ||||| || | ||| || ||||| | ||| ||||| || ||||
Sbjct 126745 CCTCAATATCTTCACCGTGAATACCAACAGCCACTCGCATAATCATATGTTGTGGGCGCT 126804
Query 146478 C 146478
|
Sbjct 126805 C 126805
>seq93
Length=1762202
Score = 104 bits (114), Expect = 2e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| ||||| ||||| | || |||||||||||||||||||| ||||||
Sbjct 806565 CCACCACGGAGACGGAGCACCAAATGGAGAGTTGACTCCTTTTGAATGTTGTAGTCGCTC 806506
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||| || ||||| | ||||| || || |||| || ||||||||||| || ||
Sbjct 806505 AAGGTACGACCATCCTCCAATTGCTTACCAGCAAAGATCAATCGCTGCTGGTCAGGTGGA 806446
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
|| || || || || ||| | | || ||||| | || | || || | ||||| |
Sbjct 806445 ATACCCTCCTTATC-CTGAATCTTTGACTTGACATTGTCAATGGTGTCTGACGACTCCAC 806387
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235
|| | || | || || || || | ||| || || || |||||||||
Sbjct 806386 TTCCAATGTGATTGTCTTGCCAGTCAAAGTCTTGACAAAGATCTGCATG 806338
>seq62
Length=1271336
Score = 96.9 bits (106), Expect = 3e-15
Identities = 130/181 (72%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104
|||| ||||||||||| || | |||||| ||||| || ||||| || || |||
Sbjct 898281 CCTTCTGAATGTTGTAGTCCGAAAGGGTGCGGCCATCCTCAAGTTGCTTTCCAGCAAAGA 898340
Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164
| || |||||||||||||| |||||||| || ||||| ||| || ||||| | |
Sbjct 898341 TCAATCGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGT 898400
Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
| | |||||| ||||||||| || | || | ||| || || || || || || ||||
Sbjct 898401 CGATCGTATCGCTGGACTCGACCTCAAGAGTGATGGTCTTGCCCGTAAGGGTCTTGACGA 898460
Query 131225 A 131225
|
Sbjct 898461 A 898461
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472011590467200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |