Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12- 03] 205 sequences; 69,693,031 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq93 95.1 1e-14 >seq93 Length=1762202 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||||| ||||||||||| || || |||||||| | || |||| || | ||| Sbjct 806322 AGGACCAAGTGCAGGGTGGACTCCTTCTGAATATTGTAGTCTGACAGGGTTCTGCCATCC 806263 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 |||||||| || || || | ||||| || || || || || | ||||| || || Sbjct 806262 TCCAATTGCTTACCGGCGAAGATAAGACGTTGCTGATCGGGTGGGATACCCTCCTTATCT 806203 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 ||| | | ||| || | | | | |||||| | || || | |||||||| Sbjct 806202 TGAATCTTCGACTTAACGTTGTCGATTGTGTCGGATGATTCAACCTCAAGAGTGATGGTC 806143 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||||||||| || ||||| || |||||||| Sbjct 806142 TTTCCGGTCAAGGTCTTGACGAAGATCTGCAT 806111 Score = 91.5 bits (100), Expect = 1e-13 Identities = 164/239 (69%), Gaps = 3/239 (1%) Strand=Plus/Minus Query 16700 CGCATTTAC---CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATG 16756 |||||||| || || || || | || |||| ||| || || ||||||||||| ||| Sbjct 806577 CGCATTTATTGACCACCACGGAGACGGAGCACCAAATGGAGAGTTGACTCCTTTTGAATG 806518 Query 16757 TTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGT 16816 ||||||||| || ||| | ||||||||||| || || ||| | || | ||||| Sbjct 806517 TTGTAGTCGCTCAAGGTACGACCATCCTCCAATTGCTTACCAGCAAAGATCAATCGCTGC 806458 Query 16817 TGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCG 16876 ||||| || | ||||| || || ||| | ||| || | | | | ||||| Sbjct 806457 TGGTCAGGTGGAATACCCTCCTTATCCTGAATCTTTGACTTGACATTGTCAATGGTGTCT 806398 Query 16877 CCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | |||| ||||| ||||| || || || |||| || |||||||| |||||||| Sbjct 806397 GACGACTCCACTTCCAATGTGATTGTCTTGCCAGTCAAAGTCTTGACAAAGATCTGCAT 806339 Score = 89.7 bits (98), Expect = 4e-13 Identities = 150/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || || | ||| || ||||||||||| || || |||||||||| Sbjct 806109 CCTCCACGGAGACGGAGGACGAGATGGAGGGTGGACTCCTTCTGGATATTGTAGTCGGAG 806050 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | |||| | || || | ||| ||||| || | || || || |||||||| ||| Sbjct 806049 AGGGTTCGTCCATCTTCGAGTTGCTTGCCAGCGAAGATCAGGCGTTGTTGGTCGGGAGGG 805990 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||| || ||||| || | | ||| || | | | | |||||| || || Sbjct 805989 ATGCCTTCCTTGTCCTGGATCTTCGACTTAACGTTGTCGATGGTGTCGGAGGATTCTACC 805930 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAA 16925 |||| ||||||||| ||||| ||||| || ||||||| Sbjct 805929 TCCAGGGTGATGGTCTTTCCAGTCAGGGTCTTGACAA 805893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405086987912950