Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12-
03] 205 sequences; 69,693,031 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq124 140 4e-28
seq93 91.5 2e-13
>seq124
Length=198120
Score = 140 bits (154), Expect = 4e-28
Identities = 618/968 (64%), Gaps = 18/968 (2%)
Strand=Plus/Plus
Query 62747 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 62806
|||| || |||| || ||||| || ||||||| || | | || | | ||||||
Sbjct 125949 GCAAGGGAAGCCAAGTTGCAAACAGCGACCTCATCAGGAGCACAGTACTCCACAATCTCA 126008
Query 62807 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 62866
||||| || || | || || || | || | || || |||||| | || ||
Sbjct 126009 GTGCAGAGGTTGGAGCTTCGAATTGTGCCGAGGTTCTTCTGGTTGCTCTTTCTATTGCAA 126068
Query 62867 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 62926
|||||||| || || ||||||||| | ||||| || |||| | || | || | | |
Sbjct 126069 GCATCCTTGTAGAGCATGAATGGATTCCCAGTCTCGGTCTGTGCCTCCAAGATGGAGTAC 126128
Query 62927 CAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCTT---TTCTCTTTCGTA--TAGT 62980
|| | | || | ||||| || | ||| | ||| ||| | ||||| |
Sbjct 126129 CAAA-GTTTCTGTGCCTTGATGGTC---TTGCGACCCTTGCCTTCACGCTCGTACTTCTC 126184
Query 62981 GTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGA 63040
||||| | | |||||||| || || | |||| ||| || || || || | ||
Sbjct 126185 GTATAGAGCC--TCGAACTCATCACCATAGACATCAGCCAAGCCTGGGCACTCGTTGGGG 126242
Query 63041 CACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAA 63100
|||||||| | ||||||||| | | || || || ||||| ||||||||||| |||||
Sbjct 126243 CACATCAAAGTCCACTCTCCATTCTTCTCAACACGCTTCATGAAGAGATCAGGGATCCAC 126302
Query 63101 AGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCG 63160
| || || ||||| | | || |||||| || || |||||| |||||
Sbjct 126303 AAGGCGTAGAAGAGATCACGAGCTCGGACTTCCTCTTTGCCGTGGTTCTTTCGGAGATCA 126362
Query 63161 AGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGT 63220
||| || | | | ||| | ||||| || || | ||| ||||| | | | || || |
Sbjct 126363 AGGTACTCGAAGACATCTGCGTGCCATGGCTCGAGGTAGATGGCGAAAGCACCTGGTCTC 126422
Query 63221 TTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATA 63280
||||| || || || || | |||||| || ||||| || | || | | ||| ||||
Sbjct 126423 TTGTTGCCACCTTGGTCGACGTATCTGGCAGTGTTGTTGAAGACACGTAGCATGGGAACG 126482
Query 63281 ATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAAT--ATTAC 63338
||||| ||||| | || || || || | || ||| || | |||||||| |
Sbjct 126483 ATACCGTTGGAGTTTCCGTTCGTTCCCGCAATGTAGGCACCGGTAGCACGAATTCGGTGA 126542
Query 63339 TAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTAT 63398
|||| ||||| ||||| || || | || ||||| | ||||| || || ||||
Sbjct 126543 ACATTG--AGACCGATTCCACCAGCATTCTTGGAGATCATGGCGCAAGTCTTCAATGTAT 126600
Query 63399 CATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGT 63458
| ||||| || || || ||||| || |||||| | || || || ||| | |||
Sbjct 126601 CGTAGATACCGTCAATGCTATCCTCTTTCATGTCGATAAGGAAGCATGAAGAGAGTTGTG 126660
Query 63459 GACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAA 63518
| || || || ||||| || || ||||| || || || || || | || |
Sbjct 126661 CTTGTGGTGTACCGGCGGCGAATAAAGTTGGGGAAGCATGGGTGAAGCACTTCTGGGACA 126720
Query 63519 GTAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATGAATTCCTACTGCGACA 63577
| ||||| ||||| || || | || ||||| || | ||||| || || || ||
Sbjct 126721 TCAAGTTGTATGTCTCGATGGCAGCCTCAATATCTTCACCG-TGAATACCAACAGCCACT 126779
Query 63578 CGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGAT 63637
||||| | ||| || || || | || |||||| || | | | ||| |||
Sbjct 126780 CGCATAATCATATGTTGTGGGCGCTCGCAGATCTTTCCGTCCAGGCGGAGGAGGTATGAT 126839
Query 63638 TTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACC 63697
|| | ||| || || || || || | ||| ||||| || || || | |||| |
Sbjct 126840 CGCTCGAGAGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCCCGGTCATAGACAATAGCG 126899
Query 63698 GAGTTGAG 63705
||||||||
Sbjct 126900 GAGTTGAG 126907
>seq93
Length=1762202
Score = 91.5 bits (100), Expect = 2e-13
Identities = 227/339 (67%), Gaps = 13/339 (4%)
Strand=Plus/Minus
Query 32881 TTGTCTCTATAGCATTAAAGAGATAGtttttttCATTA---CTA-TCTTTAACATATGTA 32936
||||||| || ||||| |||||||| | | | || || || || | |||||
Sbjct 1531842 TTGTCTCGATGGCATTGAAGAGATA----TGTGCGTTGGGCCTGCTCCTTGATGTATGTG 1531787
Query 32937 TCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAG 32996
|| || | ||| ||| | || ||||||||||| || || || || || ||||||
Sbjct 1531786 TCGATGAGGAGAGAGTACGTCTCGGAATGAATGTTCTCCATCATGATCTGGAAGCCGTAG 1531727
Query 32997 AAGCATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTC 33056
||||| | |||||||| ||||| ||||| || ||| || || | | || || ||
Sbjct 1531726 AAGCAGCGAGCCTCGGGGATCTGAACTTCACCACTAAAGCGCTCGACAAGGTTCTCGTTG 1531667
Query 33057 ACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATA---TTTTTCG 33113
|| ||||| || || || || || || | || ||| || || || | |||
Sbjct 1531666 ACGATTCCATCTGAAGCGGCGAAGAATGCAAGAACGTGTGAGATGAAGTAACGCTCATCG 1531607
Query 33114 TC-TGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGT 33172
|| | | | | | || ||||| || | || ||| || || | ||| | ||||| | ||
Sbjct 1531606 TCATTGAGCTTG-TTGTTCCAGTCGTGGAGATCCTTCGACAGATCAATCTCTTCTGCGGT 1531548
Query 33173 CCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGAT 33211
||| || |||||||| ||||| || ||||| | ||||||
Sbjct 1531547 CCAGAAAGATGCCTCGGCCTTCTTGTACATCTGCCAGAT 1531509
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633630376318000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |