Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12- 03] 205 sequences; 69,693,031 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq93 134 1e-26 seq99 89.7 4e-13 seq62 89.7 4e-13 >seq93 Length=1762202 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || || ||||| || || |||||||||| || ||| | || Sbjct 806111 ATGCAGATCTTCGTCAAGACCTTGACCGGAAAGACCATCACTCTTGAGGTTGAATCATCC 806170 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || || |||||||| ||||||||||| ||||||||||| Sbjct 806171 GACACAATCGACAACGTTAAGTCGAAGATTCAAGATAAGGAGGGTATCCCACCCGATCAG 806230 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||||||||| || ||||| || || || |||||| | | ||| | || || ||||| Sbjct 806231 CAACGTCTTATCTTCGCCGGTAAGCAATTGGAGGATGGCAGAACCCTGTCAGACTACAAT 806290 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427 ||||| || || |||||| | || || || Sbjct 806291 ATTCAGAAGGAGTCCACCCTGCACTTGGT 806319 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || ||||| || || || || |||| | |||||||| | | Sbjct 806339 ATGCAGATCTTTGTCAAGACTTTGACTGGCAAGACAATCACATTGGAAGTGGAGTCGTCA 806398 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| || |||| ||| ||||| || ||||||||||||||||| || || Sbjct 806399 GACACCATTGACAATGTCAAGTCAAAGATTCAGGATAAGGAGGGTATTCCACCTGACCAG 806458 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || ||||| || || || || |||||| || ||| | ||| |||||| Sbjct 806459 CAGCGATTGATCTTTGCTGGTAAGCAATTGGAGGATGGTCGTACCTTGAGCGACTACAAC 806518 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427 |||||||| || || || | ||||| || Sbjct 806519 ATTCAAAAGGAGTCAACTCTCCATTTGGT 806547 Score = 87.8 bits (96), Expect = 2e-12 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || |||| || || || || ||| ||||||| | || || | || Sbjct 805624 ACTGGCAAGACCATCACCCTCGAGGTTGAGTCCAGCGATACCATCGATAATGTAAAGAGC 805683 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || ||||| ||||||||||| ||||| ||||| |||||||| | || || || || || Sbjct 805684 AAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAACAACGCTTGATCTTCGCTGGAAAG 805743 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415 ||| | || || |||||| | || ||||| || || || ||||| ||||| Sbjct 805744 CAGCTTGAAGACGGCCGCACTCTTTCGGATTATAATATCCAGAAAGAGTCCAC 805796 >seq99 Length=1752785 Score = 89.7 bits (98), Expect = 4e-13 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 22228 TTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTG 22287 || ||||| || | || || || || |||| || || ||||| | | ||| || | Sbjct 456448 TTCGTTAAGACCCTCACGGGCAAGACTATCACCCTCGAGGTGGAGTCGAGCGACACTATC 456507 Query 22288 GACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTT 22347 ||| | |||| || || || |||||||| || || |||||||| |||||||| || Sbjct 456508 GACAACGTCAAGTCCAAGATCCAGGACAAGGAAGGAATCCCACCCGACCAACAACGCCTG 456567 Query 22348 ATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 || || || ||||| || | |||||| ||| ||| | |||||||||||| ||||| Sbjct 456568 ATCTTCGCTGGCAAGCAACTCGAGGATGGCCGTACCCTGAGCGATTACAACATCCAAAA 456626 >seq62 Length=1271336 Score = 89.7 bits (98), Expect = 4e-13 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || |||||||||| || || ||| |||||| | ||| | |||| Sbjct 898446 ACGGGCAAGACCATCACTCTTGAGGTCGAGTCCAGCGATACGATCGACAACGTCAAGTCC 898387 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||| || ||||| || || || || | || ||||| || || Sbjct 898386 AAGATCCAGGACAAGGAGGGAATCCCACCGGACCAGCAGCGATTGATCTTTGCTGGAAAG 898327 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 || | |||||| ||||||| | || || ||||||||||| || Sbjct 898326 CAACTTGAGGATGGCCGCACCCTTTCGGACTACAACATTCAGAA 898283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419726951335825