Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12-
03] 205 sequences; 69,693,031 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq62 91.5 3e-13
seq158 87.8 4e-12
>seq62
Length=1271336
Score = 91.5 bits (100), Expect = 3e-13
Identities = 141/199 (71%), Gaps = 8/199 (4%)
Strand=Plus/Minus
Query 218517 TGACTTCATCGACAAGGAGCTCATTCTTTTC----TCGCGGTATGATGTGGAGCGTTCTA 218572
||||||| | ||||||| |||||||||||| | || | | || | ||||| |
Sbjct 375982 TGACTTCGTGAACAAGGAACTCATTCTTTTCAGTATGGCCG-ACAATCTT---CGTTCCA 375927
Query 218573 TTCCCAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCATTCA 218632
||||| ||| | ||||| ||||||| ||| | ||| || | | || ||||
Sbjct 375926 TTCCCTCCGTCATTGATGGTTTCAAGCCTGGACAGAGAAAGGTCATGTACGCTTGTTTCA 375867
Query 218633 AGCGGAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTT 218692
|||| |||||| || ||| || ||||||| | | || |||||||||| || ||||
Sbjct 375866 AGCGCAACCTGACTCGAGATATGAAGGTCGTTGAATTGGCTGGTTATGTCTCAGAAAACA 375807
Query 218693 CTGGCTACCATCACGGTGA 218711
||| |||||||||||||||
Sbjct 375806 CTGCCTACCATCACGGTGA 375788
>seq158
Length=868126
Score = 87.8 bits (96), Expect = 4e-12
Identities = 94/122 (77%), Gaps = 2/122 (2%)
Strand=Plus/Minus
Query 280702 CTCACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA- 280760
||||||| || || ||||||||||| || ||| ||||| | ||| | | ||
Sbjct 377612 CTCACTCGCGTATGTTAGGTCTTTCTGGTGGTCAGCGTGTCAAGGTCGTCTTGGCTGCTT 377553
Query 280761 GCTCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGC 280820
|||| |||||||| |||||| |||||||||| ||||||||||||||||| |||| |||
Sbjct 377552 GCTC-GTGGCAACGTCCTCACTTGATCGTTCTTGACGAGCCTACCAACTACTTGGATCGC 377494
Query 280821 GA 280822
||
Sbjct 377493 GA 377492
Score = 84.2 bits (92), Expect = 4e-11
Identities = 106/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404
|| |||||||| || |||| ||| | || ||||||| ||||||||||| |||
Sbjct 379014 GGCGAGGATCTTTGCAACTGCACATTCAACTTGGCCTATGGTGCTAAGATTCTGCTCAAC 378955
Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464
|||| ||| | | |||||||| | || ||||||||| ||||||||| || |
Sbjct 378954 CAAACCCATCTCCGCCTGAAGCGTGGTCAGCGATATGGTCTCTGCGGTCCCAACGGTTCC 378895
Query 279465 GGTAAGAGCACTCTAATGCGCGCCAT 279490
|| ||| |||||| |||||||||||
Sbjct 378894 GGAAAGTCCACTCTCATGCGCGCCAT 378869
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027834100322405
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |