Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12- 03] 205 sequences; 69,693,031 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq93 125 6e-24 seq99 93.3 4e-14 >seq93 Length=1762202 Score = 125 bits (138), Expect = 6e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| || | | || ||||| | || || || |||||||||||||| ||||| Sbjct 806566 ACCACCACGGAGACGGAGCACCAAATGGAGAGTTGACTCCTTTTGAATGTTGTAGTCGCT 806507 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 || |||||| ||| || | ||| |||||||| |||| | ||||| ||||| || || Sbjct 806506 CAAGGTACGACCATCCTCCAATTGCTTACCAGCAAAGATCAATCGCTGCTGGTCAGGTGG 806447 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||| || || || || ||||||| || | | |||| |||||| | || || || Sbjct 806446 AATACCCTCCTTATCCTGAATCTTTGACTTGACATTGTCAATGGTGTCTGACGACTCCAC 806387 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 |||| || | || ||||| |||| ||| || ||||| ||||||||| Sbjct 806386 TTCCAATGTGATTGTCTTGCCAGTCAAAGTCTTGACAAAGATCTGCATG 806338 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||||||||| || | | || | ||| | || || ||||| || || || ||||| Sbjct 805829 ATACCGCCACGAAGACGGAGGACGAGATGGAGAGTGGACTCTTTCTGGATATTATAATCC 805770 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| || |||||||| || || |||||| |||| | || |||||||| || Sbjct 805769 GAAAGAGTGCGGCCGTCTTCAAGCTGCTTTCCAGCGAAGATCAAGCGTTGTTGGTCGGGG 805710 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| || ||||| |||||| |||| | || | ||| ||| |||| || Sbjct 805709 GGAATGCCCTCCTTGTCCTGAATCTTGCTCTTTACATTATCGATGGTATCGCTGGACTCA 805650 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGT 114358 || || | ||| | || ||||| || Sbjct 805649 ACCTCGAGGGTGATGGTCTTGCCAGT 805624 >seq99 Length=1752785 Score = 93.3 bits (102), Expect = 4e-14 Identities = 139/196 (71%), Gaps = 1/196 (1%) Strand=Plus/Minus Query 114179 ATGTATC-GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTT 114237 ||||||| || || | ||||| |||||||||||||||| ||||| ||| || |||| Sbjct 456643 ATGTATCTGTTCATACCTTTTGGATGTTGTAATCGCTCAGGGTACGGCCATCCTCGAGTT 456584 Query 114238 GTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCT 114297 | || |||||| |||| || || |||||||| || || || ||||| ||||| |||| Sbjct 456583 GCTTGCCAGCGAAGATCAGGCGTTGTTGGTCGGGTGGGATTCCTTCCTTGTCCTGGATCT 456524 Query 114298 TTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGG 114357 | || | | || | |||||| | || || || || | ||| | || ||||| | Sbjct 456523 TGGACTTGACGTTGTCGATAGTGTCGCTCGACTCCACCTCGAGGGTGATAGTCTTGCCCG 456464 Query 114358 TCAGAGTTTTTACAAA 114373 | || || || || || Sbjct 456463 TGAGGGTCTTAACGAA 456448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420133350320460