Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12- 03] 205 sequences; 69,693,031 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq124 228 2e-54 seq93 196 9e-45 >seq124 Length=198120 Score = 228 bits (252), Expect = 2e-54 Identities = 853/1321 (65%), Gaps = 46/1321 (3%) Strand=Plus/Plus Query 244090 GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGG 244149 ||| || ||||| || || || | || || || || ||||| |||| || || Sbjct 125381 GTTGACGACCTGGAATTCACCAGCAAGAACACGACGAGAGTAGATGTTGGATGTGTATGG 125440 Query 244150 CTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACAC 244209 ||||| || ||| || ||| || || || || || ||||| |||||||| | || Sbjct 125441 CTCGAAGCACTCGTTGAAGCCGAGAATTTGACTGGTACTGGCAGTTGGCATGGGAGCAAC 125500 Query 244210 CAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAG---TC 244266 |||| ||||| | || |||||| || ||| ||| || ||| || || Sbjct 125501 GAGCAAGCTGTTGCGAACACCGTGCTGCTTGAT-------CTG--CTGCTTCAAGGTATC 125551 Query 244267 CCACATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTT 244326 ||| | || ||||||| | ||| |||||||||||| |||| ||| ||||| Sbjct 125552 CCA---GTCCCAGAGGTCGGTAGGAGTGACACCCCACATGTCATACTGAAGCTCACCCTT 125608 Query 244327 GCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTA-CAGC 244385 | |||||| || ||||| ||| ||| || |||| || ||| |||| | | | Sbjct 125609 GGAGACGGGTGAACCTTCGTATGTCTCGTATGGTCCGTGAACCTTGGCAAGCTCAACTGA 125668 Query 244386 TCTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCT 244445 || ||| ||||||| ||| ||||||||||||||| |||| | || ||||| Sbjct 125669 AGAAGT-GAGAGCGGCGTGGTAAATGGTCTCGAAGATCTGGATGTTGAGGTGCTTGGCCT 125727 Query 244446 TGCCGCAG-GT-GAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCC 244503 | | || || ||| || | || | || ||| | || || || || || || || Sbjct 125728 --CAGGAGAGTCGAATGGAAGGCGGAGAGCCAAGAAAGCATCAGCAAGACCTTGGACACC 125785 Query 244504 GATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTT 244563 || | || |||| ||| || |||| | |||| ||||| || ||||| |||| Sbjct 125786 GACAGCAATAGGTCGGTGACGGAAGTTGCTCTTCTTGGCCTCGGGGACAGGGTAGTAGTT 125845 Query 244564 GCCGTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTG 244623 | | || || | |||||| ||||| | || | || ||| ||| ||| | Sbjct 125846 GACATCAATGATCTTGTTCAGGTTCTTGACGACAACCTGGCAGACTTCGTGGAGCTTCGC 125905 Query 244624 AAAGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGAC 244683 ||||||||| || | | ||| | || ||| | | | ||| || | Sbjct 125906 AAAGTCGTA------GGTACCATCGTTGGTGTTGA------CGTAGGTGGGGAGAGCAAG 125953 Query 244684 GCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCA 244743 | |||| |||||| || || ||||| || | ||||| |||||||| ||||| Sbjct 125954 GGAAGCCAAGTTGCAAACAGCGACCTCATCAGGAGCACAGTACTCCACAATCTCAGTGCA 126013 Query 244744 GAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTC 244803 |||||| || || ||||| |||| || || ||| ||| ||||| || || Sbjct 126014 GAGGTTGGAGCTTCGAATTGTGCCGAGGTTCTTCTGGTTGCTCTTTCTATTGCAAGCATC 126073 Query 244804 CTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAG 244863 ||||||||||||||| || ||| |||||| ||| || | | || | || ||| || Sbjct 126074 CTTGTAGAGCATGAATGGATTCCCAGTCTCGGTCTGTGCCTCCAAGATGGAGTACCAAAG 126133 Query 244864 GTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGC 244923 | | ||||||| ||| ||||| ||||||| || |||||| ||| || || Sbjct 126134 TTTCTGTGCCTTGATGGTCTTGCGACCCTTGCCTTCACGCTCGTACTTCTCGTATAGAGC 126193 Query 244924 CTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACT 244983 ||||||||| || |||| || | | ||| |||||| |||||||| | | | Sbjct 126194 CTCGAACTCATCACCATAGACATCAGCCAAGCCTGGGCACTCGTTGGGGCACATCAAAGT 126253 Query 244984 CCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAA 245043 |||||| || | || || | || ||||||||| || |||||||| | ||| | ||| Sbjct 126254 CCACTCTCCATTCTTCTCAACACGCTTCATGAAGAGATCAGGGATCCACAAGGCGTAGAA 126313 Query 245044 GAGGTCCCTGGTCCTCTG--CTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCA 245101 ||| || | | ||| | || || ||| |||||| | || || | | || Sbjct 126314 GAGATCAC--GAGCTCGGACTTCCTCTTTGCCGTGGTTCTTTCGGAGATCAAGGTACTCG 126371 Query 245102 AAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCT 245161 ||||| || ||||||| ||||| | ||||| |||| || || || | ||||||||| Sbjct 126372 AAGACATCTGCGTGCCATGGCTCGAGGTAGATGGCGAAAGCACCTGGTCTCTTGTTGCCA 126431 Query 245162 CCCTGGTCCACCATCCTCTCGAGCG-CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTT 245220 || ||||| || || | || | |||||||| || || | || || || ||||| Sbjct 126432 CCTTGGTCGACGTATCTGGC-AGTGTTGTTGAAGACACGTAGCATGGGAACGATACCGTT 126490 Query 245221 AGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTG---ATGGA 245277 |||| ||||| || ||| |||||||| || | | | || | | || || || Sbjct 126491 GGAGTTTCCGTTCGTTCCCGCAATGTAGGCACCGGTAGCAC-GAATTCGGTGAACATTGA 126549 Query 245278 CATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTAT 245337 | || | ||| || || | ||||||||| | |||||| |||| | || || || Sbjct 126550 GA--CCGATTCCACCAGCATTCTTGGAGATCATGGCGCAAGTCTTCAATGTATCGTAGAT 126607 Query 245338 GCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGG 245397 || || ||||| ||| ||||||| || || ||||| || || || | | ||||| | Sbjct 126608 ACCGTCAATGCTATCCTCTTTCATGTCGATAAGGAAGCATGAAGAGAG-TTGTGCTTGTG 126666 Query 245398 G 245398 | Sbjct 126667 G 126667 >seq93 Length=1762202 Score = 196 bits (216), Expect = 9e-45 Identities = 362/517 (70%), Gaps = 13/517 (3%) Strand=Plus/Plus Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGA-CGCAAC 42691 || ||||||||||||||||| |||||||| ||| |||||| | || | || | | || Sbjct 1531894 CCTTGCATCAAGAAGAAGGCCGACTGGGCTGTCAGATGGATCCA-AGACAAGAGCTCTAC 1531952 Query 42692 GTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTT 42751 || | | | || || || || |||| |||||||| ||||||||| || | || Sbjct 1531953 CTTTGCTCAACGTCTCGTCGCATTCGCCGCTGTCGAGGGTATCTTCTTCAGTGGATCGTT 1532012 Query 42752 CGCCTCCATCTTCTGGCTCAAGCAGAA-GGTGTCGATGCCCGGACTCACCTTCTCGAACG 42810 ||| || ||||||||| | ||| || ||| || ||| | || || || ||||| |||| Sbjct 1532013 CGCATCTATCTTCTGGTTAAAGAAGCGTGGTCTC-ATGGCTGGTCTGACTTTCTCTAACG 1532071 Query 42811 AACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCC 42870 |||| ||| | |||||||| || || | |||||||| ||||| || ||||| | Sbjct 1532072 AACTTATCTCTCGTGACGAGGGTCTTCACACCGACTTTGCTTGCCTTCTCTTCTCT---C 1532128 Query 42871 ACCTCAGGCACAAGCCCTCG-AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAG 42929 | | | |||| |||| | ||| | |||| | | |||| || ||||| || ||| Sbjct 1532129 ATTTGAAGCACC-GCCCAAGCAAGCAAGCCGTCCAAGACGTCATTACCGAGGCTGTTGAG 1532187 Query 42930 ATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGAC 42989 || ||| |||||||| | || || | || || | || ||||||||||| | || Sbjct 1532188 ATTGAGCAGGAGTTCTTGACCGAGGCTCTTCCTTGCGCACTCCTCGGCATGAACTCCAAC 1532247 Query 42990 CTCATG-TGCAAGTACATCCAGTACGTCGCCGACCATCTCC-TGTGCCAGATGGGTCTCA 43047 |||||| |||| |||||| ||| ||| || || | ||||| ||| | ||| | Sbjct 1532248 CTCATGAAGCAA-TACATCGAGTTCGTTGCTGATCGTCTCCTTGTTGCTCTTGGCAACGA 1532306 Query 43048 GCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCA 43107 | | ||||||| | | ||| |||||||| |||||||||||||| | | || | Sbjct 1532307 GAAG-GTCTACAAGTCAGCCAACCCATTCGACTTCATGGAGAACATCTCACTTGCCGGAA 1532365 Query 43108 AGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCA 43144 |||||||||| ||||||||||| || | |||||||| Sbjct 1532366 AGACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCA 1532402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944336780130800