Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12-
03] 205 sequences; 69,693,031 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq93 86.0 6e-12
>seq93
Length=1762202
Score = 86.0 bits (94), Expect = 6e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| | ||| | || || || |||||||||||||| || | ||| || | ||
Sbjct 806550 AGCACCAAATGGAGAGTTGACTCCTTTTGAATGTTGTAGTCGCTCAAGGTACGACCATCC 806491
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| | ||||| || ||| | || | ||||||||||| || ||||| || || || ||
Sbjct 806490 TCCAATTGCTTACCAGCAAAGATCAATCGCTGCTGGTCAGGTGGAATACCCTCCTTATCC 806431
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || ||| ||| ||| || | || || | |||||||| | || | |||
Sbjct 806430 TGAATCTTTGACTTGACATTGTCAATGGTGTCTGACGACTCCACTTCCAATGTGATTGTC 806371
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||||| |||||||| || || || || |||||
Sbjct 806370 TTGCCAGTCAAAGTCTTGACAAAGATCTGCAT 806339
Score = 84.2 bits (92), Expect = 2e-11
Identities = 141/204 (69%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
|||||| || | | || || ||||| | || || ||||| || || || ||||| |
Sbjct 805827 ACCGCCACGAAGACGGAGGACGAGATGGAGAGTGGACTCTTTCTGGATATTATAATCCGA 805768
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| ||||| |||||||||||||||| || || | || | || || |||||||| ||
Sbjct 805767 AAGAGTGCGGCCGTCTTCAAGCTGCTTTCCAGCGAAGATCAAGCGTTGTTGGTCGGGGGG 805708
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||| || || || || || || || ||||||| || | ||||| | || || ||
Sbjct 805707 AATGCCCTCCTTGTCCTGAATCTTGCTCTTTACATTATCGATGGTATCGCTGGACTCAAC 805648
Query 64396 TTCTACAGTTACGGTCTTGCCGGT 64419
|| | || | ||||||||| ||
Sbjct 805647 CTCGAGGGTGATGGTCTTGCCAGT 805624
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499643519660200
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |