Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12-
03] 205 sequences; 69,693,031 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq124 165 8e-36
>seq124
Length=198120
Score = 165 bits (182), Expect = 8e-36
Identities = 872/1382 (63%), Gaps = 54/1382 (4%)
Strand=Plus/Minus
Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCC 94071
||||| || | || || |||||||| ||| ||| ||| | ||||| | ||| ||
Sbjct 126577 ATCTCCAAGAATGCTGGTGGAATCGGTCTCAATGTTCACCGAATTCGTGCTACCGGTGCC 126518
Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131
||||| || || || || | ||||||||| |||| || ||||| || |||||||||
Sbjct 126517 TACATTGCGGGAACGAACGGAAACTCCAACGGTATCGTTCCCATGCTACGTGTCTTCAAC 126458
Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191
||| | || | ||||| ||||| ||||| | ||| ||| ||||||| ||||
Sbjct 126457 AACACTGCCAGATACGTCGACCAAGGTGGCAACAAGAGACCAGGTGCTTTCGCCATCTAC 126398
Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAAC 94251
|||||||| |||||||| || || | | | | || || |||||||||||||||||
Sbjct 126397 CTCGAGCCATGGCACGCAGATGTCTTCGAGTACCTTGATCTCCGAAAGAACCACGGCAAA 126338
Query 94252 GATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAA 94311
|| | | || | || ||||||||||| | ||| | || || || || |||||
Sbjct 126337 GAGGAAGTCCGAGCTCGTGATCTCTTCTACGCCTTGTGGATCCCTGATCTCTTCATGAAG 126278
Query 94312 CGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCC 94371
|| || ||||| || | |||| | | | || ||||| || || || || || |
Sbjct 126277 CGTGTTGAGAAGAATGGAGAGTGGACTTTGATGTGCCCCAACGAGTGCCCAGGCTTGGCT 126218
Query 94372 GACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGA--------ATCG-CAG 94422
|| || | ||| ||| || || | |||| ||||| | || |
Sbjct 126217 GATGTCTATGG---------TGATGAGTTCGAGGCTCTATACGAGAAGTACGAGCGTGAA 126167
Query 94423 GGCAAGGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAG 94482
||||||| | ||| || | || ||| || ||| | ||| |||| | ||||
Sbjct 126166 GGCAAGGGTCGCAAGACCATCAAGGCACAGAAACTTTGGTACTCCATCTTGGAGGCACAG 126107
Query 94483 GTGGAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAG 94542
||||| || | || | ||| | | |||||| || ||| ||| |||||||
Sbjct 126106 ACCGAGACTGGGAATCCATTCATGCTCTACAAGGATGCTTGCAATAGAAAGAGCAACCAG 126047
Query 94543 CAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCT 94602
|| ||||||| || ||||| || || ||||| |||||||| ||||| | ||
Sbjct 126046 AAGAACCTCGGCACAATTCGAAGCTCCAACCTCTGCACTGAGATTGTGGAGTACTGTGCT 125987
Query 94603 CCGGACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGAT 94662
|| || ||| | ||||| || ||| ||| ||| | || |||| | |||
Sbjct 125986 CCTGATGAGGTCGCTGTTTGCAACTTGGCTTCCCTTGCTCTCCCCACCTACGT------- 125934
Query 94663 GCCTACACGTCTAC--TGCTTCGTTCGATCTGGAGGAGCT-TGTGAACTTCGCGGGAAGG 94719
| |||| | || || | | | ||| | | | |||| ||| | | | |||
Sbjct 125933 --CAACAC--CAACGATGGTACCTACGACTTTGCGAAGCTCCACGAAGT---CTGCCAGG 125881
Query 94720 ATG--GTCTTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGG 94777
|| ||| ||||||||||| | | || || |||| |||||| ||||| |||||
Sbjct 125880 TTGTCGTCAAGAACCTGAACAAGATCATTGATGTCAACTACTACCCTGTCCCCGAGGCCA 125821
Query 94778 AGAACTCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGC 94837
|||| ||| | || || || || | |||| ||||| ||| | || || ||
Sbjct 125820 AGAAGAGCAACTTCCGTCACCGACCTATTGCTGTCGGTGTCCAAGGTCTTGCTGATGCTT 125761
Query 94838 TGGTGATGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATAT 94897
| || | || || || | ||||||| || || | | || | | || |
Sbjct 125760 TCTTGGCTCTCCGCCTTCCATTCGACTCTCCTGAGGCCAAGCACCTCAACATCCAGATCT 125701
Query 94898 TCGAAAGCATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCG 94957
|||| | |||||| ||| || | | || || | | |||| || ||
Sbjct 125700 TCGAGACCATTTACCACGCCGCTCTCACTTCTTCAGTTGAGCTTGCCA---AGGTTCACG 125644
Query 94958 GGCCACACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCT 95017
| ||| |||| | | | || || ||| | |||| |||||| ||| | |
Sbjct 125643 GACCATACGAGACATACGAAGGTTCACCCGTCTCCAAGGGTGAGCTTCAGTATGACATGT 125584
Query 95018 GGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGA-AGCTCTACGC-GCTGATGTTATCAA 95075
||||||| | || | | || | |||||||| | || | || || || | | |
Sbjct 125583 GGGGTGTCACTCCTACCGACCTCTGGGACTGGGATACCTTGAAGCAGCAGA--TCAAGCA 125526
Query 95076 ACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGAT 95135
|||||||| ||| |||| || || |||||||| || ||| || || ||
Sbjct 125525 GCACGGTGTTCGCAACAGCTTGCTCGTTGCTCCCATGCCAACTGCCAGTACCAGTCAAAT 125466
Query 95136 CCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCT 95195
|| ||| |||||||| ||||| || | ||| |||||| | ||| | || || ||
Sbjct 125465 TCTCGGCTTCAACGAGTGCTTCGAGCCATACACATCCAACATCTACTCTCGTCGTGTTCT 125406
Query 95196 CGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTC--TCTGGGT 95253
|| || ||||||| ||| ||||| ||||| ||| || |||| | |||||
Sbjct 125405 TGCTGGTGAATTCCAGGTCGTCAACCCATGGCTCCTGAAGGATCT--CGTCGATATGGGT 125348
Query 95254 GTGTGGGGTGACAAGGTCAAGAACCAACTGCTACGCGCCAA---CGGCTCCGTCCAGAAC 95310
| ||| |||||| | ||||||| | | |||| | || || ||||||||
Sbjct 125347 CTATGGTCTGACAACATGAAGAACCGCATCAT---CGCCGATGGTGGTTCTATCCAGAAC 125291
Query 95311 ATCCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAG 95370
|| || | || || | ||||||||||| |||||||||||||| ||||||||| | ||
Sbjct 125290 ATTCCCAACATCCCAGCTGACATCAAGGCTCTCTACAAGACCGTCTGGGAGATCTCTCAA 125231
Query 95371 CG 95372
||
Sbjct 125230 CG 125229
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494721932271800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |