Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12- 03] 205 sequences; 69,693,031 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq124 165 8e-36 >seq124 Length=198120 Score = 165 bits (182), Expect = 8e-36 Identities = 872/1382 (63%), Gaps = 54/1382 (4%) Strand=Plus/Minus Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCC 94071 ||||| || | || || |||||||| ||| ||| ||| | ||||| | ||| || Sbjct 126577 ATCTCCAAGAATGCTGGTGGAATCGGTCTCAATGTTCACCGAATTCGTGCTACCGGTGCC 126518 Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131 ||||| || || || || | ||||||||| |||| || ||||| || ||||||||| Sbjct 126517 TACATTGCGGGAACGAACGGAAACTCCAACGGTATCGTTCCCATGCTACGTGTCTTCAAC 126458 Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191 ||| | || | ||||| ||||| ||||| | ||| ||| ||||||| |||| Sbjct 126457 AACACTGCCAGATACGTCGACCAAGGTGGCAACAAGAGACCAGGTGCTTTCGCCATCTAC 126398 Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAAC 94251 |||||||| |||||||| || || | | | | || || ||||||||||||||||| Sbjct 126397 CTCGAGCCATGGCACGCAGATGTCTTCGAGTACCTTGATCTCCGAAAGAACCACGGCAAA 126338 Query 94252 GATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAA 94311 || | | || | || ||||||||||| | ||| | || || || || ||||| Sbjct 126337 GAGGAAGTCCGAGCTCGTGATCTCTTCTACGCCTTGTGGATCCCTGATCTCTTCATGAAG 126278 Query 94312 CGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCC 94371 || || ||||| || | |||| | | | || ||||| || || || || || | Sbjct 126277 CGTGTTGAGAAGAATGGAGAGTGGACTTTGATGTGCCCCAACGAGTGCCCAGGCTTGGCT 126218 Query 94372 GACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGA--------ATCG-CAG 94422 || || | ||| ||| || || | |||| ||||| | || | Sbjct 126217 GATGTCTATGG---------TGATGAGTTCGAGGCTCTATACGAGAAGTACGAGCGTGAA 126167 Query 94423 GGCAAGGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAG 94482 ||||||| | ||| || | || ||| || ||| | ||| |||| | |||| Sbjct 126166 GGCAAGGGTCGCAAGACCATCAAGGCACAGAAACTTTGGTACTCCATCTTGGAGGCACAG 126107 Query 94483 GTGGAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAG 94542 ||||| || | || | ||| | | |||||| || ||| ||| ||||||| Sbjct 126106 ACCGAGACTGGGAATCCATTCATGCTCTACAAGGATGCTTGCAATAGAAAGAGCAACCAG 126047 Query 94543 CAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCT 94602 || ||||||| || ||||| || || ||||| |||||||| ||||| | || Sbjct 126046 AAGAACCTCGGCACAATTCGAAGCTCCAACCTCTGCACTGAGATTGTGGAGTACTGTGCT 125987 Query 94603 CCGGACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGAT 94662 || || ||| | ||||| || ||| ||| ||| | || |||| | ||| Sbjct 125986 CCTGATGAGGTCGCTGTTTGCAACTTGGCTTCCCTTGCTCTCCCCACCTACGT------- 125934 Query 94663 GCCTACACGTCTAC--TGCTTCGTTCGATCTGGAGGAGCT-TGTGAACTTCGCGGGAAGG 94719 | |||| | || || | | | ||| | | | |||| ||| | | | ||| Sbjct 125933 --CAACAC--CAACGATGGTACCTACGACTTTGCGAAGCTCCACGAAGT---CTGCCAGG 125881 Query 94720 ATG--GTCTTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGG 94777 || ||| ||||||||||| | | || || |||| |||||| ||||| ||||| Sbjct 125880 TTGTCGTCAAGAACCTGAACAAGATCATTGATGTCAACTACTACCCTGTCCCCGAGGCCA 125821 Query 94778 AGAACTCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGC 94837 |||| ||| | || || || || | |||| ||||| ||| | || || || Sbjct 125820 AGAAGAGCAACTTCCGTCACCGACCTATTGCTGTCGGTGTCCAAGGTCTTGCTGATGCTT 125761 Query 94838 TGGTGATGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATAT 94897 | || | || || || | ||||||| || || | | || | | || | Sbjct 125760 TCTTGGCTCTCCGCCTTCCATTCGACTCTCCTGAGGCCAAGCACCTCAACATCCAGATCT 125701 Query 94898 TCGAAAGCATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCG 94957 |||| | |||||| ||| || | | || || | | |||| || || Sbjct 125700 TCGAGACCATTTACCACGCCGCTCTCACTTCTTCAGTTGAGCTTGCCA---AGGTTCACG 125644 Query 94958 GGCCACACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCT 95017 | ||| |||| | | | || || ||| | |||| |||||| ||| | | Sbjct 125643 GACCATACGAGACATACGAAGGTTCACCCGTCTCCAAGGGTGAGCTTCAGTATGACATGT 125584 Query 95018 GGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGA-AGCTCTACGC-GCTGATGTTATCAA 95075 ||||||| | || | | || | |||||||| | || | || || || | | | Sbjct 125583 GGGGTGTCACTCCTACCGACCTCTGGGACTGGGATACCTTGAAGCAGCAGA--TCAAGCA 125526 Query 95076 ACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGAT 95135 |||||||| ||| |||| || || |||||||| || ||| || || || Sbjct 125525 GCACGGTGTTCGCAACAGCTTGCTCGTTGCTCCCATGCCAACTGCCAGTACCAGTCAAAT 125466 Query 95136 CCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCT 95195 || ||| |||||||| ||||| || | ||| |||||| | ||| | || || || Sbjct 125465 TCTCGGCTTCAACGAGTGCTTCGAGCCATACACATCCAACATCTACTCTCGTCGTGTTCT 125406 Query 95196 CGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTC--TCTGGGT 95253 || || ||||||| ||| ||||| ||||| ||| || |||| | ||||| Sbjct 125405 TGCTGGTGAATTCCAGGTCGTCAACCCATGGCTCCTGAAGGATCT--CGTCGATATGGGT 125348 Query 95254 GTGTGGGGTGACAAGGTCAAGAACCAACTGCTACGCGCCAA---CGGCTCCGTCCAGAAC 95310 | ||| |||||| | ||||||| | | |||| | || || |||||||| Sbjct 125347 CTATGGTCTGACAACATGAAGAACCGCATCAT---CGCCGATGGTGGTTCTATCCAGAAC 125291 Query 95311 ATCCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAG 95370 || || | || || | ||||||||||| |||||||||||||| ||||||||| | || Sbjct 125290 ATTCCCAACATCCCAGCTGACATCAAGGCTCTCTACAAGACCGTCTGGGAGATCTCTCAA 125231 Query 95371 CG 95372 || Sbjct 125230 CG 125229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494721932271800