Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12- 03] 205 sequences; 69,693,031 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq93 131 2e-25 seq99 93.3 4e-14 >seq93 Length=1762202 Score = 131 bits (144), Expect = 2e-25 Identities = 169/230 (73%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | || ||||| | ||||||||||||||||||||||||||||| Sbjct 806565 CCACCACGGAGACGGAGCACCAAATGGAGAGTTGACTCCTTTTGAATGTTGTAGTCGCTC 806506 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| ||||| | ||| ||||| | | |||| | ||||| ||||| || || Sbjct 806505 AAGGTACGACCATCCTCCAATTGCTTACCAGCAAAGATCAATCGCTGCTGGTCAGGTGGA 806446 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG--TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 ||||| || || || ||| | |||| || |||| || | |||||| | |||||||| Sbjct 806445 ATACCCTCCTTATC-CTGAATCTTTGACTTGACATTG-TCAATGGTGTCTGACGACTCCA 806388 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 | || | || | || || ||||||| ||| || ||||| ||||||||| Sbjct 806387 CTTCCAATGTGATTGTCTTGCCAGTCAAAGTCTTGACAAAGATCTGCATG 806338 >seq99 Length=1752785 Score = 93.3 bits (102), Expect = 4e-14 Identities = 139/196 (71%), Gaps = 1/196 (1%) Strand=Plus/Minus Query 138411 ATGTATGT-TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTT 138469 |||||| | || | ||||||| |||||||| ||||||| ||||| |||||||||| Sbjct 456643 ATGTATCTGTTCATACCTTTTGGATGTTGTAATCGCTCAGGGTACGGCCATCCTCGAGTT 456584 Query 138470 GTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTT 138529 | || || | |||| || || |||||||| || || || ||||| ||||| ||| | Sbjct 456583 GCTTGCCAGCGAAGATCAGGCGTTGTTGGTCGGGTGGGATTCCTTCCTTGTCCTGGATCT 456524 Query 138530 TTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAG 138589 | || | | || | |||||| ||||||||||||||| || | || || || | Sbjct 456523 TGGACTTGACGTTGTCGATAGTGTCGCTCGACTCCACCTCGAGGGTGATAGTCTTGCCCG 456464 Query 138590 TCAGAGTTTTTACAAA 138605 | || || || || || Sbjct 456463 TGAGGGTCTTAACGAA 456448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496261128327600