Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12-
03] 205 sequences; 69,693,031 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq124 183 4e-41
seq93 129 7e-25
seq160 93.3 5e-14
>seq124
Length=198120
Score = 183 bits (202), Expect = 4e-41
Identities = 1108/1747 (63%), Gaps = 49/1747 (3%)
Strand=Plus/Plus
Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617
|||||||| ||||| || ||||| | ||| ||||||| || | ||||| ||
Sbjct 125076 CGGAGGTAATACATGCCAGTCTTCAAGCCCAACTTCCAGCCAGCGAAGTGCATGCTGGTG 125135
Query 115618 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATG-AA 115676
| |||| | ||| ||| || ||| || |||||| ||| |||||||||||| ||
Sbjct 125136 ATCTTGCCCATTGTGGGATCTTTCATATGGATGTTCATCGATTGAGATTGATCGATGTAA 125195
Query 115677 GCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCAT--CTTGATTTCCCACACAGTT 115734
|| || || || || ||||| | | || ||| | ||| ||||| || ||
Sbjct 125196 GC-ACCACGGTCAGCGGCCATCTGGA--CGATTGTTCGTTGAGAGATCTCCCAGACGGTC 125252
Query 115735 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCC 115794
||||||| ||| || ||| ||||||| | || || |||||||| ||||| |
Sbjct 125253 TTGTAGAGAGCCTTGATGTCAGCTGGGATGTTGGGAATGTTCTGGATAGAACCACCATCG 125312
Query 115795 TTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCACG 115854
|| ||| | | |||||| | | ||||| ||||| || | |||||||| || |
Sbjct 125313 GCGATGATGCGGTTCTTCATGTTGTCAGACCATAGACCCATATCGACGAGATCCTTCAGG 125372
Query 115855 AGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATGTTGGT 115913
|| ||||| || || ||||| || || || | ||| ||||||||||
Sbjct 125373 AGCCATGGGTTGACGACCTGGAATTCACCAGCAAGAACACGAC-GAGAGTAGATGTTGGA 125431
Query 115914 CGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCT-GTGGAGGCTGTGGGCA 115972
||||||||||| |||||||| ||| | || ||| || | || || ||| || ||||
Sbjct 125432 TGTGTATGGCTCGAAGCACTCGTTG-AAGCCGAGAATTTGACTGGTACTGGCAGTTGGCA 125490
Query 115973 TGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGT 116032
|||| || | ||| | ||||||||| | ||| | | | || | | ||| | || |
Sbjct 125491 TGGGAGCAACGAGCAAGCTGTTGCGAACACCGTGCTGCTTGATCTGCTGCTTCAAGGTAT 125550
Query 116033 CCCAGTCGTAGTTG-AGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGG 116091
||||||| || | | | | | | | ||||||| ||| |||| || ||| | |
Sbjct 125551 CCCAGTCCCAGAGGTCGGTAGGAGTGACAC-CCCACATGTCATACTGAAGCTCACCCTTG 125609
Query 116092 GACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCT- 116150
|| | || || || || ||||||| ||||| || | ||||| || | || | ||
Sbjct 125610 GAGACGGGTGAACCTTCGTATGTCTCGTATGGTCCGTGAACCTTGGCAAGCTC--AACTG 125667
Query 116151 -CGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCT 116209
| ||| || ||||| || || ||||| || || | || | ||||||||
Sbjct 125668 AAGAAGTGAGAGCGGCGTGGTAAATGGTCTCGAAGATCTGGATGTTGAGGTGCTTGGCCT 125727
Query 116210 CGTCGGAATCAAACGCGAGACGG-CACAAAATAAATACATCCGCGAGACCTTGGACACCG 116268
| || || || | || ||| | || ||| |||| || |||||||||||||||
Sbjct 125728 CAGGAGAGTCGAATGGAAGGCGGAGAGCCAAGAAA-GCATCAGCAAGACCTTGGACACCG 125786
Query 116269 AGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTC---CACGGGATAAAAA 116325
| |||| || || || | | || ||| || ||| || || || |
Sbjct 125787 ACAGCAATAGGTCGGTGACGGAAGTTGCTCTT---CTTGGCCTCGGGGACAGGGTAGTAG 125843
Query 116326 TTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTT 116385
|| ||| || | | | || || || ||| |||||||| || ||| || |||||
Sbjct 125844 TTGACATCAATGATCTTGTTCAGGTTCTTGACGACAACCTGGCAGACTTCGTGGAGCTTC 125903
Query 116386 TCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGA 116445
| | || | | | | | ||||| || | || || || | || ||||
Sbjct 125904 GCAAAGTCGTAGGTACCATCGTTGGTGTTGACGTAGGTGGGGAGAGCAAGGGAAGCCAAG 125963
Query 116446 TTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAA 116505
|| || |||| | |||||| | || |||||| | ||| || || || | || ||
Sbjct 125964 TTGCAAACAGCGACCTCATCAGGAGCACAGTACTCCACAATCTCAGTGCAGAGGTTGGAG 126023
Query 116506 CTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGC 116565
|| ||| ||||| | |||||| || || |||| | || || |||||||||||||||
Sbjct 126024 CTTCGAATTGTGCCGAGGTTCTTCTGGTTGCTCTTTCTATTGCAAGCATCCTTGTAGAGC 126083
Query 116566 ATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGC 116624
|| |||| |||| ||||| || || | || | || | | ||| | || | | |
Sbjct 126084 ATGAATGGATTCCCAGTCTCGGTCTGTGCCTCCAAGATGGAGTACCAAAGTTTCTGTGCC 126143
Query 116625 TGGCACAGTGGCGTTGGCTCGCCCCT--CCT----CCTCGTACTTTGTGTAGAGGGCCTC 116678
| | ||| ||| || |||| ||| ||||||||| ||| || |||||
Sbjct 126144 TTG----ATGGTCTTG---CGACCCTTGCCTTCACGCTCGTACTTCTCGTATAGAGCCTC 126196
Query 116679 AAACTCTTCACCCACAG-CCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACC 116737
||||| ||| ||| || | || | | ||||| || | || || | | || ||
Sbjct 126197 GAACTCATCA-CCATAGACATCAGCCAAGCCTGGGCACTCGTTGGGGCACATCAAAGTCC 126255
Query 116738 ATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGA 116797
| | ||| || |||||| |||||||||||||| || |||||||| | || ||||||
Sbjct 126256 ACTCTCCATTCTTCTCAACACGCTTCATGAAGAGATCAGGGATCCACAAGGCGTAGAAGA 126315
Query 116798 GATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGA 116857
|||| ||| || |||| || | || || || || | || | | || | ||
Sbjct 126316 GATCACGAGCTCGGACTTCCTCTTTGCCGTGGTTCTTTCGGAGATCAAGGTACTCGAAGA 126375
Query 116858 TATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCGAC----GACCAGCC 116913
||| |||||||| || || ||||| | |||| | | ||| | | ||| |
Sbjct 126376 CATCTGCGTGCCATGGCTCGAGGTAGATGGCGAAAG-CACCTGGTCTCTTGTTGCCACCT 126434
Query 116914 TGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGAT 116973
|||| || || || || || ||| || || || ||||| |||| |||||| | ||
Sbjct 126435 TGGTCGACGTATCTGGCAGTGTTGTTGAAGACACGTAGCATGGGAACGATACCGTTGGAG 126494
Query 116974 TGGCCATTTGTCCCCCGAATACGAGACTTGTTGGCTCTGACATC-GTGGATGTGCATACC 117032
| || || || ||| ||| | | | || | || || ||| | | | |||
Sbjct 126495 TTTCCGTTCGTTCCCGCAATGTAGGCACCGGTAGCAC-GAATTCGGTGAACATTGAGACC 126553
Query 117033 AATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATC 117092
|| || || || ||| ||||| ||||| | | | | ||||||| || ||
Sbjct 126554 GATTCCACCAGCATTCTTGGAGATCATGGCGCAAGTCTTCAATGTATCGTAGATACCGTC 126613
Query 117093 GATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACC 117152
|| || | || | |||| |||||||| || | ||||| |||||||||
Sbjct 126614 AATGCTATCCTCTTTCATGTCGATAAGGAAGCATGAAGAGAGTTGTGCTTGTGGTGTACC 126673
Query 117153 AGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAA-CATACCTTGGGACATCTTATCGTAGG 117211
||| ||| | ||||| | || ||| |||| || | ||||||||| | ||| |
Sbjct 126674 GGCGGCGAATAAAGTTGGGGAAGCATGGGTGAAGCACTTC-TGGGACATCAAGTTGTATG 126732
Query 117212 TCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGT 117271
|||| | | ||| ||| ||||| ||||||||||| | | || ||||||| ||| |
Sbjct 126733 TCTCGATGGCAGCCTCAATATCTTCACCGTGAATACCAACAGCCACTCGCATAATCATAT 126792
Query 117272 ATTGGGG 117278
||| ||
Sbjct 126793 GTTGTGG 126799
>seq93
Length=1762202
Score = 129 bits (142), Expect = 7e-25
Identities = 303/455 (67%), Gaps = 12/455 (3%)
Strand=Plus/Minus
Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290
|||||| || || ||||||||||||||||| ||||| || | || ||| ||||||||
Sbjct 1532400 GTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTTCCGGCAAGTGAGATGTTCTCCAT 1532341
Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGCACCCCAATCTGTTTGAGG 127345
|| || |||||||| ||| || | | | |||| || | | |||
Sbjct 1532340 GAAGTCGAATGGGTTGGCTGACTTGTAGACCTTCTCGTTGCCAAGAGCAACA-----AGG 1532286
Query 127346 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGG 127405
|||||||| | ||| |||| ||||| | ||| | |||||||| |||| |||
Sbjct 1532285 AGACGATCAGCAACGAACTCGATGTATTGCTTCATGAGGTTGGAGTTCATGCCGAGGAGT 1532226
Query 127406 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATG 127465
|| || || || || | |||| ||| |||||| || ||||| || | || |
Sbjct 1532225 GCGCAAGGAAGAGCCTCGGTCAAGAACTCCTGCTCAATCTCAACAGCCTCGGTAATGACG 1532166
Query 127466 GCGTGAATAGTGTCCACCCCAGGTCTATTGCGTAAAGTCTT-GAAGAGTTCCACAGCAAA 127524
| || | | | | | || | | || | || | |||||| ||||||
Sbjct 1532165 TCTTGGACGGCTTGCTTGCTTGGGCGGT-GCTTCAAATGAGAGAAGAGAAGGCAAGCAAA 1532107
Query 127525 CTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCAT 127584
|| ||| |||||||||||||| ||||| ||||| || ||||| |||||| | |||
Sbjct 1532106 GTCGGTGTGAAGACCCTCGTCACGAGAGATAAGTTCGTTAGAGAAAGTCAGACCAGCCAT 1532047
Query 127585 GAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTC 127644
|||||| |||||||| |||||||| || | || || ||| ||||||||| |||||
Sbjct 1532046 GAGACCACGCTTCTTTAACCAGAAGATAGATGCGAACGATCCACTGAAGAAGATACCCTC 1531987
Query 127645 CACACACGCGAACGCAAATAGACGCTCGGCAAAGG 127679
||| ||||| || | ||||| | |||||||
Sbjct 1531986 GACAGCGGCGAATGCGACGAGACGTTGAGCAAAGG 1531952
>seq160
Length=1564179
Score = 93.3 bits (102), Expect = 5e-14
Identities = 219/324 (68%), Gaps = 10/324 (3%)
Strand=Plus/Minus
Query 12791 GAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCACGTTCATCATT--CGCG 12848
||||||||||||||| ||||||| || || | || ||| | |||||| || | |
Sbjct 1276134 GAAGCCATCCATCTCCGTCAAGATCTGGTTAAGCGTAGCTTCTCTTTCATCGTTGCCACC 1276075
Query 12849 GGCATACCACCCGCACTG----CGTTGCTTACCGACGGCGTCAATTTCGTCAATGAAAAC 12904
| || | | || || || ||| || | || |||||||| |||||||| |
Sbjct 1276074 GCCAAATGAACCTGCCTTTCCACGAGCCTTTCCAATTGCATCAATTTCATCAATGAAGAT 1276015
Query 12905 GATACACGGT-TGATTTTCACGGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGA 12963
|||||| || || | ||| | || | | |||| |||||| |||| ||||| |
Sbjct 1276014 GATACATGGGGTGTTCTTC-CTTGCCATAGCGAAGAGATCTCGTACTCGGGAAGCACCAA 1275956
Query 12964 CACCCACAAACATCTCCACAAAATTGGCGGCG-GAACATTGGATGAAGGGGACGTTGGAT 13022
|||| |||||||||||||| || | || | || ||| | || |||||| || | ||||
Sbjct 1275955 CACCAACAAACATCTCCACGAACTCGGAGCCGCTGACACT-GAAGAAGGGTACTTGGGAT 1275897
Query 13023 TCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCTGGTTTCCCCGCGAGAAGG 13082
|| || || ||||| || | | || || ||||| ||||| || | ||||
Sbjct 1275896 TCGCCAGCAGTGGCTTTCGCCAACAACGTTTTACCCGTTCCTGGAGGTCCGGAAAGAATA 1275837
Query 13083 GCACCACGTGGGATCCTGGCACCA 13106
||||| ||||| ||| | ||||||
Sbjct 1275836 GCACCTCGTGGTATCTTAGCACCA 1275813
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613505627887800
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