Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12- 03] 205 sequences; 69,693,031 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq93 118 2e-21 >seq93 Length=1762202 Score = 118 bits (130), Expect = 2e-21 Identities = 146/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 |||||||| ||||||||||| | ||||||||| ||| || | ||||| |||| ||| Sbjct 806541 TGGAGAGTTGACTCCTTTTGAATGTTGTAGTCGCTCAAGGTACGACCATCCTCCAATTGC 806482 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 || || || ||||| | ||||||||||| || ||| || || |||||||||||| Sbjct 806481 TTACCAGCAAAGATCAATCGCTGCTGGTCAGGTGGAATACCCTCCTTATCCTGAATCTTT 806422 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 ||| || || | |||||||| | || || ||||| ||||| ||||| || || Sbjct 806421 GACTTGACATTGTCAATGGTGTCTGACGACTCCACTTCCAATGTGATTGTCTTGCCAGTC 806362 Query 199607 AGAGTTTTCACAAAAATTTG 199626 | ||| || ||||| || || Sbjct 806361 AAAGTCTTGACAAAGATCTG 806342 Score = 100 bits (110), Expect = 7e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||| | ||| || || |||||||| || | |||||||| | || || Sbjct 806331 CGAAGACGGAGGACCAAGTGCAGGGTGGACTCCTTCTGAATATTGTAGTCTGACAGGGTT 806272 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 || ||||| |||| ||||| ||||||||||| ||||| ||||| || || || || Sbjct 806271 CTGCCATCCTCCAATTGCTTACCGGCGAAGATAAGACGTTGCTGATCGGGTGGGATACCC 806212 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || |||||||| ||| ||| |||| ||||| | || ||| || || | Sbjct 806211 TCCTTATCTTGAATCTTCGACTTAACGTTGTCGATTGTGTCGGATGATTCAACCTCAAGA 806152 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || || | || || || || || || Sbjct 806151 GTGATGGTCTTTCCGGTCAAGGTCTTGACGAAGATCTG 806114 Score = 89.7 bits (98), Expect = 1e-12 Identities = 139/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||| || |||||||| ||||| || |||| || || || | | ||| Sbjct 805820 CGAAGACGGAGGACGAGATGGAGAGTGGACTCTTTCTGGATATTATAATCCGAAAGAGTG 805761 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || ||||| ||||||||||| |||||||| | || || ||||| || ||| || Sbjct 805760 CGGCCGTCTTCAAGCTGCTTTCCAGCGAAGATCAAGCGTTGTTGGTCGGGGGGAATGCCC 805701 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||||||||| ||| || |||| ||| || | | || || || | Sbjct 805700 TCCTTGTCCTGAATCTTGCTCTTTACATTATCGATGGTATCGCTGGACTCAACCTCGAGG 805641 Query 199589 GTGATCGTCTTACCCGTGA 199607 ||||| ||||| || |||| Sbjct 805640 GTGATGGTCTTGCCAGTGA 805622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178918503488735