Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12- 03] 205 sequences; 69,693,031 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq93 125 8e-24 seq99 116 4e-21 seq62 107 2e-18 >seq93 Length=1762202 Score = 125 bits (138), Expect = 8e-24 Identities = 139/183 (76%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||||||||||||||| || || || | || ||||| |||||||| ||||| Sbjct 806074 CTCCTTCTGGATATTGTAGTCGGAGAGGGTTCGTCCATCTTCGAGTTGCTTGCCAGCGAA 806015 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| ||| || ||||||| || | || ||||||||| ||||||| ||| | ||| Sbjct 806014 GATCAGGCGTTGTTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTCGACTT-AACGT 805956 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | |||||| ||||| || |||| |||||||| || || ||||| || || | Sbjct 805955 TGTCGATGGTGTCGGAGGATTCTACCTCCAGGGTGATGGTCTTTCCAGTCAGGGTCTTGA 805896 Query 46581 CAA 46583 ||| Sbjct 805895 CAA 805893 Score = 93.3 bits (102), Expect = 5e-14 Identities = 161/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 46360 TTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTA 46419 ||||| || || | | ||| | ||||| ||| | || ||||||||| || ||||| Sbjct 806572 TTATTGACCACCACGGAGACGGAGCACCAAATGGAGAGTTGACTCCTTTTGAATGTTGTA 806513 Query 46420 GTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479 |||| | || || | || || | ||||| || || || ||||| ||||||||||| Sbjct 806512 GTCGCTCAAGGTACGACCATCCTCCAATTGCTTACCAGCAAAGATCAATCGCTGCTGGTC 806453 Query 46480 GGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGA 46539 | || | | |||||| ||| ||||| ||||| | | | ||||| ||| Sbjct 806452 AGGTGGAATACCCTCCTTATCCTGAATCTTTGACTTGACATTGTCAATGGTGTCTGACGA 806393 Query 46540 TTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||| |||| ||||| || ||||| |||| || || |||||||| ||||| Sbjct 806392 CTCCACTTCCAATGTGATTGTCTTGCCAGTCAAAGTCTTGACAAAGATCTGCAT 806339 >seq99 Length=1752785 Score = 116 bits (128), Expect = 4e-21 Identities = 137/183 (75%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||||||||| ||||| ||| || || || | || ||||| |||||||| ||||| | Sbjct 456628 CCTTTTGGATGTTGTAATCGCTCAGGGTACGGCCATCCTCGAGTTGCTTGCCAGCGAAGA 456569 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 ||| ||| || ||||||| || | | ||||||||| |||||| ||||| ||| | Sbjct 456568 TCAGGCGTTGTTGGTCGGGTGGGATTCCTTCCTTGTCCTGGATCTTGGACTTGA-CGTTG 456510 Query 46524 CC-ACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | ||||||||||| ||||| || | ||||| || |||||||| || || ||||| Sbjct 456509 TCGATAGTGTCGCTCGACTCCACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTAACG 456450 Query 46583 AAG 46585 ||| Sbjct 456449 AAG 456447 >seq62 Length=1271336 Score = 107 bits (118), Expect = 2e-18 Identities = 135/183 (74%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| || || |||||||| || || ||||| | || || || ||||| || || || | Sbjct 898281 CCTTCTGAATGTTGTAGTCCGAAAGGGTGCGGCCATCCTCAAGTTGCTTTCCAGCAAAGA 898340 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 |||| ||||||||||| | || | | |||||||||| |||||| ||||| ||| | Sbjct 898341 TCAATCGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTG 898399 Query 46524 -CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | ||| ||||| || || || || | |||||||| |||||||| || || || || Sbjct 898400 TCGATCGTATCGCTGGACTCGACCTCAAGAGTGATGGTCTTGCCCGTAAGGGTCTTGACG 898459 Query 46583 AAG 46585 ||| Sbjct 898460 AAG 898462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565236951576600