Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12- 03] 205 sequences; 69,693,031 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq93 140 3e-28 seq99 105 7e-18 >seq93 Length=1762202 Score = 140 bits (154), Expect = 3e-28 Identities = 197/276 (71%), Gaps = 3/276 (1%) Strand=Plus/Minus Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226 ||| |||||||||||| || ||| | || || || | ||||||||| ||| || || Sbjct 1531793 GTATGTGTCGATGAGGAGAGAGTACGTCTCGGAATGAATGTTCTCCATCATGATCTGGAA 1531734 Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATT 133286 |||||| ||||| || |||||| | ||| ||||| | || |||||||| || || Sbjct 1531733 GCCGTAGAAGCAGCGAGCCTCGGGGATCTGAACTTCACCACTAAAGCGCTCGACAAGGTT 1531674 Query 133287 TTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCG 133346 ||||||||||| || || |||||||| || || || ||||| |||||| | || Sbjct 1531673 CTCGTTGACGATTCCATCTGAAGCGGCGAAGAATGCAAGAACGTGTGAGATGAAGTAACG 1531614 Query 133347 CTCGTTGTCGTT---CAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTC 133403 ||| | ||| || | | | ||||||| | ||||| ||||| || | ||| || Sbjct 1531613 CTCATCGTCATTGAGCTTGTTGTTCCAGTCGTGGAGATCCTTCGACAGATCAATCTCTTC 1531554 Query 133404 GACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 ||||||| || || |||||||| || |||||||| Sbjct 1531553 TGCGGTCCAGAAAGATGCCTCGGCCTTCTTGTACAT 1531518 Score = 113 bits (124), Expect = 5e-20 Identities = 348/530 (66%), Gaps = 10/530 (2%) Strand=Plus/Minus Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650 ||| || ||| |||||| || || || || ||||| || || || || ||||| | Sbjct 1532418 CATGACACCAGCTTTTTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTTCCGGC 1532359 Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTT---GGTGCC 132707 | || ||| | ||| || || || |||||||||| |||||| ||| | |||| Sbjct 1532358 AAGTGAGATGTTCTCCATGAAGTCGAATGGGTTGGCTGACTTGTAGACCTTCTCGTTGCC 1532299 Query 132708 GATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCA 132767 | || | || || || | || || |||||||||||||||||| |||| | | | Sbjct 1532298 AAG-AG--CAACAAGGAGACGATCAGCAACGAACTCGATGTATTGCTTCATGAGGTTGGA 1532242 Query 132768 ATTAAGTCCCAGCAGA-CGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGA 132826 || | || || || |||| || || || ||||| | || ||||| || | | Sbjct 1532241 GTTCATGCCGAGGAGTGCGCAA-GGAAGAGCCTCGGTCAAGAACTCCTGCTCAATCTCAA 1532183 Query 132827 CCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGA 132886 | || ||||| | || || ||| | ||| || || ||| |||||| || Sbjct 1532182 CAGCCTCGGTAATGACGTCTTGGACGGCTTGCTTGCTTGGGCGGTGCTTCAAATGAGAGA 1532123 Query 132887 ACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGA 132946 | | | ||||||||||||| || | |||||||| | || || |||||||| || Sbjct 1532122 AGAGAAGGCAAGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATAAGTTCGTTAGAGA 1532063 Query 132947 AAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCG 133006 |||||| || | |||||| || || || || | ||| || || | ||||| || Sbjct 1532062 AAGTCAGACCAGCCATGAGACCACGCTTCTTTAACCAGAAGATAGATGCGAACGATCCAC 1532003 Query 133007 AAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGT-GGCTTCT 133065 ||||||| |||||||| || ||||| || || || || | | || || | ||| Sbjct 1532002 TGAAGAAGATACCCTCGACAGCGGCGAATGCGACGAGACGTTGAGCAAAGGTAGAGCTCT 1531943 Query 133066 TTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGG 133115 | || | |||||| | | ||||| |||||||| | |||| ||| || Sbjct 1531942 TGTCTTG-GATCCATCTGACAGCCCAGTCGGCCTTCTTCTTGATGCAAGG 1531894 >seq99 Length=1752785 Score = 105 bits (116), Expect = 7e-18 Identities = 134/182 (74%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || ||||||||||| || |||||| |||| || ||| | | ||||| | Sbjct 456448 TTCGTTAAGACCCTCACGGGCAAGACTATCACCCTCGAGGTGGAGTCGAGCGACACTATC 456507 Query 38313 CA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCT 38371 | |||| | || || |||| ||||| || ||||| || |||||||||| || || Sbjct 456508 GACAACG-TCAAGTCCAAGATCCAGGACAAGGAAGGAATCCCACCCGACCAACAACGCCT 456566 Query 38372 CATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAA 38431 || | ||| ||||| || || || || | || ||||| | ||| |||||||||||||| Sbjct 456567 GATCTTCGCTGGCAAGCAACTCGAGGATGGCCGTACCCTGAGCGATTACAACATCCAAAA 456626 Query 38432 GG 38433 || Sbjct 456627 GG 456628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500171518307200