Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12-
03] 205 sequences; 69,693,031 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq93 324 2e-83
seq63 113 6e-20
>seq93
Length=1762202
Score = 324 bits (358), Expect = 2e-83
Identities = 521/746 (70%), Gaps = 6/746 (1%)
Strand=Plus/Minus
Query 7403 TCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAA 7462
|| ||||| || || || || ||||| | |||||| | |||||| |||||||
Sbjct 596680 TCCTTCTTGTGCTTGCGCTTGAACTCGTTGACGAAGTGGTTGACGAGTCTGTTATCGAAA 596621
Query 7463 TCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCA 7522
|| |||||||||||||| ||||| || || || | |||||||| |||||||| | |||
Sbjct 596620 TCCTCACCACCCAAGTGGGTATCACCAGCAGTGGACTTGACTTCGAAGATACCCTCCTCA 596561
Query 7523 ATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTA 7582
||| | || | || ||||| || || || ||||| || || || ||||| |||||
Sbjct 596560 ATGGTCAAGAGGGAGACATCGAAAGTTCCTCCACCAAGATCGAAGATGAGAACGTTACGC 596501
Query 7583 TCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATA 7642
|| | || ||||||||||||||||| |||||||| ||||| || ||||| || ||
Sbjct 596500 TCACCCTCAACCTTCTTATCGAGACCGTATGCGATAGCGGCCGCAGTGGGTTCGTTGATG 596441
Query 7643 ATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAA 7702
|| || ||| ||| || || ||||| | ||||| || || ||||| ||||| |||
Sbjct 596440 ATTCGGAGAACGTTGAGACCGGCAATTAAACCAGCATCCTTGGTGGCTTGACGTTGTGAA 596381
Query 7703 TCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGAT 7762
||| | |||||||| ||||| || ||||| |||| |||| | ||| || || |
Sbjct 596380 TCGGTGAAGTAGGCTGGGACTGTGACGACAGCGTTGTTGACAGTTCCACCAAGGTATGCC 596321
Query 7763 TCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGT 7822
||||| | || ||| || | ||||| || || || || |||| | || ||
Sbjct 596320 TCCGCAGTCTCGCGCATCTTAACCAAGACCATTGAAGAGATTTCCTCAGGTGTGAATTGC 596261
Query 7823 TTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACC 7882
||| | ||||| || || ||||| ||||| | || || || || ||| || ||
Sbjct 596260 TTCTTCTCACCCTTGAACTCAACCTCAATGACTGGCTT-TC--CACCACGATCAATGACG 596204
Query 7883 TTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATA 7942
| | | | | |||||||| | ||||||| || | ||||| | ||||||
Sbjct 596203 GTGAAGGGGAAGTGCTTCATATCAGCCTGGACCTCAGCATCTGCGAACTTGCGTCCGATC 596144
Query 7943 AGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCG 8002
| |||||| ||||| || |||||||| | ||||||||||| ||||||||| || ||
Sbjct 596143 AAACGCTTCGCATCGAAGACTGTGTTCTGTGGGTTCATGGCGACTTGGTTCTTTGCGGCA 596084
Query 8003 TCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTC 8062
|| ||||| ||||| || | || || || |||||| | || ||||| ||||| ||
Sbjct 596083 TCTCCGATCAGACGCTC---GGTGTCGGTGAAGGCGACGAAGGAGGGGGTAGTTCGGTTG 596027
Query 8063 CCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATAC 8122
||||||||||| ||||| ||||| | | ||| | | ||| || ||||| || ||
Sbjct 596026 CCTTGGTCGTTGGCAATGATTTCGATTCTGTCATCTCTGAAGATACCCACGCAGGAGTAT 595967
Query 8123 GTTGTTCCTAAATCAATACCGATTGC 8148
|| ||||| | ||| ||||| || ||
Sbjct 595966 GTGGTTCCGAGATCGATACCTATCGC 595941
>seq63
Length=2168410
Score = 113 bits (124), Expect = 6e-20
Identities = 210/307 (68%), Gaps = 11/307 (4%)
Strand=Plus/Minus
Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515
||||||||||| ||| |||||||| ||||| || || || || ||||| || | |||
Sbjct 1008772 ATCGAAATCTTGACCTCCCAAGTGGGTATCACCAGCAGTAGCCTTGACGGTGAAAACACC 1008713
Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575
|| | ||||| | | || ||||| || || |||||||| || || | || | ||
Sbjct 1008712 ACCCTGGATGTTGAGGAGGGACACATCGAAAGTTCCACCACCTAGATCGTAGATCAAGAC 1008653
Query 7576 GTTCGTATCG-TCGTCTTTGTTCTT------ATCGAGACCGTACGCGATAGCCGCCGCCG 7628
||| ||| || | ||| ||| | | ||||| || |||||||| || || |
Sbjct 1008652 GTT----TCGCTCCTTGTTGGACTTTCCAGCACCAAGACCATATGCGATAGCGGCGGCAG 1008597
Query 7629 TTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCG 7688
| || || || || ||||| || ||| || ||||| || | | ||||| || || |
Sbjct 1008596 TGGGCTCGTTGATGATACGGAGGACGTTGAGACCAGCGATGGCACCGGCATCCTTGGTAG 1008537
Query 7689 CTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCT 7748
| || ||||| ||||| |||||||| ||||| || | || || | | |||||||
Sbjct 1008536 CCTGACGTTGGTTGTCGTTGAAGTAGGCGGGGACAGTGATAACGGCCTTAGCAACTTTCT 1008477
Query 7749 TACCGAG 7755
| |||||
Sbjct 1008476 TTCCGAG 1008470
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635131172472200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |