Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12- 03] 205 sequences; 69,693,031 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq93 324 2e-83 seq63 113 6e-20 >seq93 Length=1762202 Score = 324 bits (358), Expect = 2e-83 Identities = 521/746 (70%), Gaps = 6/746 (1%) Strand=Plus/Minus Query 7403 TCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAA 7462 || ||||| || || || || ||||| | |||||| | |||||| ||||||| Sbjct 596680 TCCTTCTTGTGCTTGCGCTTGAACTCGTTGACGAAGTGGTTGACGAGTCTGTTATCGAAA 596621 Query 7463 TCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCA 7522 || |||||||||||||| ||||| || || || | |||||||| |||||||| | ||| Sbjct 596620 TCCTCACCACCCAAGTGGGTATCACCAGCAGTGGACTTGACTTCGAAGATACCCTCCTCA 596561 Query 7523 ATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTA 7582 ||| | || | || ||||| || || || ||||| || || || ||||| ||||| Sbjct 596560 ATGGTCAAGAGGGAGACATCGAAAGTTCCTCCACCAAGATCGAAGATGAGAACGTTACGC 596501 Query 7583 TCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATA 7642 || | || ||||||||||||||||| |||||||| ||||| || ||||| || || Sbjct 596500 TCACCCTCAACCTTCTTATCGAGACCGTATGCGATAGCGGCCGCAGTGGGTTCGTTGATG 596441 Query 7643 ATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAA 7702 || || ||| ||| || || ||||| | ||||| || || ||||| ||||| ||| Sbjct 596440 ATTCGGAGAACGTTGAGACCGGCAATTAAACCAGCATCCTTGGTGGCTTGACGTTGTGAA 596381 Query 7703 TCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGAT 7762 ||| | |||||||| ||||| || ||||| |||| |||| | ||| || || | Sbjct 596380 TCGGTGAAGTAGGCTGGGACTGTGACGACAGCGTTGTTGACAGTTCCACCAAGGTATGCC 596321 Query 7763 TCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGT 7822 ||||| | || ||| || | ||||| || || || || |||| | || || Sbjct 596320 TCCGCAGTCTCGCGCATCTTAACCAAGACCATTGAAGAGATTTCCTCAGGTGTGAATTGC 596261 Query 7823 TTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACC 7882 ||| | ||||| || || ||||| ||||| | || || || || ||| || || Sbjct 596260 TTCTTCTCACCCTTGAACTCAACCTCAATGACTGGCTT-TC--CACCACGATCAATGACG 596204 Query 7883 TTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATA 7942 | | | | | |||||||| | ||||||| || | ||||| | |||||| Sbjct 596203 GTGAAGGGGAAGTGCTTCATATCAGCCTGGACCTCAGCATCTGCGAACTTGCGTCCGATC 596144 Query 7943 AGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCG 8002 | |||||| ||||| || |||||||| | ||||||||||| ||||||||| || || Sbjct 596143 AAACGCTTCGCATCGAAGACTGTGTTCTGTGGGTTCATGGCGACTTGGTTCTTTGCGGCA 596084 Query 8003 TCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTC 8062 || ||||| ||||| || | || || || |||||| | || ||||| ||||| || Sbjct 596083 TCTCCGATCAGACGCTC---GGTGTCGGTGAAGGCGACGAAGGAGGGGGTAGTTCGGTTG 596027 Query 8063 CCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATAC 8122 ||||||||||| ||||| ||||| | | ||| | | ||| || ||||| || || Sbjct 596026 CCTTGGTCGTTGGCAATGATTTCGATTCTGTCATCTCTGAAGATACCCACGCAGGAGTAT 595967 Query 8123 GTTGTTCCTAAATCAATACCGATTGC 8148 || ||||| | ||| ||||| || || Sbjct 595966 GTGGTTCCGAGATCGATACCTATCGC 595941 >seq63 Length=2168410 Score = 113 bits (124), Expect = 6e-20 Identities = 210/307 (68%), Gaps = 11/307 (4%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||||||||||| ||| |||||||| ||||| || || || || ||||| || | ||| Sbjct 1008772 ATCGAAATCTTGACCTCCCAAGTGGGTATCACCAGCAGTAGCCTTGACGGTGAAAACACC 1008713 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 || | ||||| | | || ||||| || || |||||||| || || | || | || Sbjct 1008712 ACCCTGGATGTTGAGGAGGGACACATCGAAAGTTCCACCACCTAGATCGTAGATCAAGAC 1008653 Query 7576 GTTCGTATCG-TCGTCTTTGTTCTT------ATCGAGACCGTACGCGATAGCCGCCGCCG 7628 ||| ||| || | ||| ||| | | ||||| || |||||||| || || | Sbjct 1008652 GTT----TCGCTCCTTGTTGGACTTTCCAGCACCAAGACCATATGCGATAGCGGCGGCAG 1008597 Query 7629 TTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCG 7688 | || || || || ||||| || ||| || ||||| || | | ||||| || || | Sbjct 1008596 TGGGCTCGTTGATGATACGGAGGACGTTGAGACCAGCGATGGCACCGGCATCCTTGGTAG 1008537 Query 7689 CTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCT 7748 | || ||||| ||||| |||||||| ||||| || | || || | | ||||||| Sbjct 1008536 CCTGACGTTGGTTGTCGTTGAAGTAGGCGGGGACAGTGATAACGGCCTTAGCAACTTTCT 1008477 Query 7749 TACCGAG 7755 | ||||| Sbjct 1008476 TTCCGAG 1008470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635131172472200