Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12- 03] 205 sequences; 69,693,031 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq124 192 7e-44 seq93 131 2e-25 seq160 114 2e-20 >seq124 Length=198120 Score = 192 bits (212), Expect = 7e-44 Identities = 1120/1760 (64%), Gaps = 73/1760 (4%) Strand=Plus/Minus Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670 |||||| | ||| | ||||| || || | ||||| || || ||||||||||| ||| Sbjct 126800 CCCACAACATATGATTATGCGAGTGGCTGTTGGTATTCACGGTGAAGATATTGAGGCTGC 126741 Query 111671 TTTGGAGACATACGACAAGATGTCCCGTGGTATG-TTCATCCACGCAACACCAACCCTCT 111729 | ||||||||| || |||||||| | || |||| ||| || | ||||| | | Sbjct 126740 CATCGAGACATACAACTTGATGTCCCA-GAAGTGCTTCACCCATGCTTCCCCAACTTTAT 126682 Query 111730 TCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGG 111789 || ||| ||||||||| | | ||| | || || |||||||| | | || |||| Sbjct 126681 TCGCCGCCGGTACACCACAAGCACAACTCTCTTCATGCTTCCTTATCGACATGAAAGAGG 126622 Query 111790 ATTCAATCAATGGCATTTACGGCACTCTCACTGAA----TGTGCCCAAATCTCAAAGTGG 111845 || || | || || |||| || | |||| || ||| ||||| ||| Sbjct 126621 ATAGCATTGACGGTATCTACGATAC----ATTGAAGACTTGCGCCATGATCTCCAAGAAT 126566 Query 111846 GCTGGTGGTATCGGG----ATG--CAC---ATCCATGATGTCAGAGCCAACAAGTCTCGT 111896 |||||||| ||||| ||| ||| || | || | | | ||| ||| Sbjct 126565 GCTGGTGGAATCGGTCTCAATGTTCACCGAATTCGTGCTACCGGTGCCTACA-------- 126514 Query 111897 ATTAGAGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCC 111956 || || || || || | || | ||||| |||| ||||| || || || ||| | Sbjct 126513 -TTGCGGGAACGAACGGAAACTCCAACGGTATCGTTCCCATGCTACGTGTCTTCAACAAC 126455 Query 111957 ACAGCGCGCTATGTAAACCAAGCTGGGCGTCGCAAG----GGATCTATCGCAGTCTATCT 112012 || || | || || |||||| ||| | | || || || |||| |||| || Sbjct 126454 ACTGCCAGATACGTCGACCAAGGTGG-CAACAAGAGACCAGGTGCTTTCGCCATCTACCT 126396 Query 112013 TGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGA 112072 |||||||||||||| ||| || | |||| |||||| | || ||||| || | || Sbjct 126395 CGAGCCATGGCACGCAGATGTCTTCGAGTACCTTGATCTCCGAAAGAACCACGGCAAAGA 126336 Query 112073 GGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAG 112132 ||| | || || |||||||||| ||| | ||||| || ||||||||||||||| | Sbjct 126335 GGAAGTCCGAGCTCGTGATCTCTTCTACGCCTTGTGGATCCCTGATCTCTTCATGAAGCG 126276 Query 112133 AGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGA 112192 |||||| ||| ||| | ||| || | | || || || || || || | | || Sbjct 126275 TGTTGAGAAGAATGGAGAGTGGACTTTGATGTGCCCCAACGAGTGCCCAGGCTTGGCTGA 126216 Query 112193 TGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGAC 112252 || | ||||| ||||| || || || ||| ||||||||| | ||| | | | | Sbjct 126215 TGTCTATGGTGATGAGTTCGAGGCTCTATACGAGAAGTACGAGCGTG-AAGGCAAGGGTC 126157 Query 112253 TGC--GACGGTGCCAGCTGCCG-ATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGAC 112309 || ||| | | || | | | | ||| | | || | || | || |||||||| Sbjct 126156 -GCAAGACCAT-CAAGGCACAGAAACTTTGGTACTCCATCTTGGAGGCACAGACCGAGAC 126099 Query 112310 TGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTT 112369 ||| | |||| ||||| ||||| || || || || |||||| || || ||||| | Sbjct 126098 TGGGAATCCATTCATGCTCTACAAGGATGCTTGCAATAGAAAGAGCAACCAGAAGAACCT 126039 Query 112370 GGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGA 112429 || || || ||||||||||| || || || |||| | | ||||| Sbjct 126038 CGGCACAATTCGAAGCTCCAACCTCTGCACTGAGATTGTGGAGTACTGTGCTCCTGATGA 125979 Query 112430 GACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAA 112489 | ||||| || ||| | || || | |||||||||| || || | || || | Sbjct 125978 GGTCGCTGTTTGCAACTTGGCTTCCCTTGCTCTCCCCACCTACGTCAA--CACCAACGAT 125921 Query 112490 G--ACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAAC 112547 | || | || | || || ||||||||||| | |||| || ||||| ||| Sbjct 125920 GGTACCTACGACTTTGCGAAGCTCCACGAAGTCTGCCAGGTTGTCGTCAAGAACCTGAAC 125861 Query 112548 AGAGTTATTGATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGA 112604 | | |||||| || | ||||| || ||| | | | | | | || | | Sbjct 125860 AAGATCATTGATGTCAACTACTACCCTGTCCCCGAGGC--CAAGAAGAGC-AACTTCCGT 125804 Query 112605 CACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCAC 112664 ||||| || |||| | |||||||||||||||| || |||| ||| | | |||| Sbjct 125803 CACCGACCTATTGCTGTCGGTGTCCAAGGTCTTGCTGATGCTTTCTTGGCTCTCCGCCTT 125744 Query 112665 GCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCAC 112724 |||| || || || || ||| | |||| | || || ||||| || || ||| Sbjct 125743 CCATTCGACTCTCCTGAGGCCAAGCACCTCAACATCCAGATCTTCGAGACCATTTACCAC 125684 Query 112725 GCCGCTCTTGAGGC--GAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTG 112782 |||||||| | |||| ||| | || ||||| | || ||||| || || | | Sbjct 125683 GCCGCTCTCACTTCTTCAGTT--GAGCTTGCCAAGGTTCACGGACCATACGAGACATACG 125626 Query 112783 AGGGTTCTCCAGCTTCACAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAG 112841 | ||||| || | || |||||| | |||||| | ||| ||||||| || | || | Sbjct 125625 AAGGTTCACCCGTCTC-CAAGGGTGAGCTTCAGTATGACATGTGGG-GTGTCACTCCTAC 125568 Query 112842 C-TTCACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAG 112900 | | || |||||||| | | ||| | | |||||| || | ||| |||| ||||| Sbjct 125567 CGACCTCTGGGACTGGGATACCTTGAAGCAGCAGATCAAGCAGCACGGTGTTCGCAACAG 125508 Query 112901 TCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATG 112960 | | | || || |||||||| ||| ||| ||||| | || || || || Sbjct 125507 CTTGCTCGTTGCTCCCATGCCAACTGCCAGTACCAGTCAAATTCTCGGCTTCAACGAGTG 125448 Query 112961 CTTTGAACCCTACACGACGAACATCTA-TCTGAGAAGAACCCTCGCGGGAGAGTTTGTGA 113019 ||| || || ||||| | |||||||| ||| | | || || || || || | Sbjct 125447 CTTCGAGCCATACACATCCAACATCTACTCT-CGTCGTGTTCTTGCTGGTGAATTCCAGG 125389 Query 113020 TTGTCAACAAGCAT--CTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATAT 113077 | |||||| ||| ||| || | || ||| || || ||||| ||||| | | || Sbjct 125388 TCGTCAAC--CCATGGCTCCTGAAGGATCTCGTCGATATGGGTCTATGGTCTGACAACAT 125331 Query 113078 GAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGA 113137 |||| | | ||| | | |||||||| || || || ||| | || |||| ||| Sbjct 125330 GAAGAACCGCATCATCGCCGATGGTGGTTCTATCCAGAACATTCCCAACATCCCAGCTGA 125271 Query 113138 AATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGA--TGTCATTGACATG 113195 || ||| | ||| || || ||||| ||| | || || || | | ||| Sbjct 125270 CATCAAGGCTCTCTACAAGACCGTCTGGGAGATC--TCTCAACGAACAATCGTCCAGATG 125213 Query 113196 GCCGCAGATCGTGGTCGCTT-CATTGATCAAAGTCAAAGTATGA--ATCTATTCATGGAA 113252 ||||| || |||||| |||| ||| |||||| |||| |||| ||| || ||| || Sbjct 125212 GCCGCTGACCGTGGT-GCTTACATCGATCAATCTCAATCGATGAACATCCAT--ATGAAA 125156 Query 113253 AGTCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAA 113312 ||| || ||| |||| || | |||||| | | |||||| ||| | || Sbjct 125155 GATCCCACAATGGGCAAGATCACCAGCATGCACTTCGCTGGCTGGAAGTTGGGCTTGAAG 125096 Query 113313 ACGGGGATGTATTACCTCCG 113332 || || |||||||||||||| Sbjct 125095 ACTGGCATGTATTACCTCCG 125076 >seq93 Length=1762202 Score = 131 bits (144), Expect = 2e-25 Identities = 348/521 (67%), Gaps = 22/521 (4%) Strand=Plus/Plus Query 102110 AGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGC 102168 |||||| || || | ||||| || || |||||| | | ||| | | |||| | | Sbjct 1531890 AGTTCCTTGCATCAAGAAGAAGGCCGACTGGGCTGTCAGATGGATCCAAGACAAGAGCTC 1531949 Query 102169 GTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTT 102228 | |||||||| | || ||| ||||||| || ||| ||||||||||||||| ||| | Sbjct 1531950 -TACCTTTGCTCAACGTCTCGTCGCATTCGCCGCTGTCGAGGGTATCTTCTTCAGTGGAT 1532008 Query 102229 CCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCA 102288 | ||| |||| | ||| | |||||||| ||||||||| | ||||| ||||| | Sbjct 1532009 CGTTCGCATCTATCTTCTGGTTAAAGAAGCGTGGTCTCATGGCTGGTCTGACTTTCTCTA 1532068 Query 102289 ACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGCGGTGGAACTTTTCAAAT 102348 |||| |||||||||||||||||||| || ||| || ||||| || ||| || | Sbjct 1532069 ACGAACTTATCTCTCGTGACGAGGGTCTTCACACCGACTTTGC-TTG--CCTTCTC---T 1532122 Query 102349 TATTGCGTATTAAACCAACGACTGAG--ACTATTCATTCTA-----TTGTTAAGGAAGCC 102401 | | | | || || || || | || | | | || | | ||| || || Sbjct 1532123 TCTCTCAT-TTGAAGCACCGCCCAAGCAAGCAAGCCGTCCAAGACGTCATTACCGAGGCT 1532181 Query 102402 GTTGAGATTGAGAAGGGATTCATATTGGATGCCCTTCCATGCGCTCTCATCGGTATGAAT 102461 |||||||||||| ||| ||| | || || ||||| ||||| ||| |||| ||||| Sbjct 1532182 GTTGAGATTGAGCAGGAGTTCTTGACCGAGGCTCTTCCTTGCGCACTCCTCGGCATGAAC 1532241 Query 102462 TCTGAAAAGATGTCCGAATATATTGAGTATGTATCTGATAG-ATTGTTGAAGCAGATCGG 102520 || | ||| |||| || |||| || ||||| | | ||| || || Sbjct 1532242 TCCAACCTCATGAAGCAATACATCGAGTTCGTTGCTGATCGTCTCCTTGTTGC---TCTT 1532298 Query 102521 GGTGCCTCCAA--TTTGGAACTCCAAGAATCCATTTGACTTCATGGAGAACATTAGCCTC 102578 || | || | | || || || ||||| ||||||||||||||||| || Sbjct 1532299 GGCAACGAGAAGGTCTACAAGTCAGCCAACCCATTCGACTTCATGGAGAACATCTCACTT 1532358 Query 102579 GACGGGAAGACAAACTTCTTCGAAAAGAGGGTTGGGGACTA 102619 | ||| ||||| ||||||||||| ||| | ||||| ||||| Sbjct 1532359 GCCGGAAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTA 1532399 >seq160 Length=1564179 Score = 114 bits (126), Expect = 2e-20 Identities = 224/323 (69%), Gaps = 10/323 (3%) Strand=Plus/Minus Query 15975 AAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATT--CGCTG 16032 || ||||||||||| ||||| | |||||||| || ||| | |||||| || | | | Sbjct 1276133 AAGCCATCCATCTCCGTCAAGATCTGGTTAAGCGTAGCTTCTCTTTCATCGTTGCCACCG 1276074 Query 16033 GCATACCA-CCAGCACTGCGTTG---CTTTCCCACGGCATCAATCTCATCAATGAAGACG 16088 || | | || || | | | |||||| | |||||||| ||||||||||||| | Sbjct 1276073 CCAAATGAACCTGCCTTTCCACGAGCCTTTCCAATTGCATCAATTTCATCAATGAAGATG 1276014 Query 16089 ATGCATGGT-TGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCAC 16147 || ||||| || | ||| | || | | |||||||| ||||| || || || || Sbjct 1276013 ATACATGGGGTGTTCTTC-CTTGCCATAGCGAAGAGATCTCGTACTCGGGAAGCACCAAC 1275955 Query 16148 ACCAACAAACATCTCCACAAAGTTTGCGGCG-GAACATTGGATGAAGGGGACATTAGATT 16206 |||||||||||||||||| || | | | || ||| | || |||||| || | |||| Sbjct 1275954 ACCAACAAACATCTCCACGAACTCGGAGCCGCTGACACT-GAAGAAGGGTACTTGGGATT 1275896 Query 16207 CACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGG 16266 | || ||| ||||| || | | || |||||||| ||||| || | || | | Sbjct 1275895 CGCCAGCAGTGGCTTTCGCCAACAACGTTTTACCCGTTCCTGGAGGTCCGGAAAGAATAG 1275836 Query 16267 CACCTCGTGGAATCTTGGCGCCA 16289 |||||||||| ||||| || ||| Sbjct 1275835 CACCTCGTGGTATCTTAGCACCA 1275813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620740809347600